Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AC007547.1-201ENST00000462177 490 ntBASIC3.19□□□□□ -1.9
CDT1Q9H211 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.19□□□□□ -1.9
CDT1Q9H211 HMGN1P13-201ENST00000505795 138 ntBASIC3.19□□□□□ -1.9
CDT1Q9H211 RPL23AP94-201ENST00000512518 302 ntBASIC3.19□□□□□ -1.9
CDT1Q9H211 SCGB1D5P-201ENST00000515134 247 ntBASIC3.19□□□□□ -1.9
CDT1Q9H211 RNA5SP290-201ENST00000517133 127 ntBASIC3.19□□□□□ -1.9
CDT1Q9H211 ATP5F1P5-201ENST00000526403 760 ntBASIC3.19□□□□□ -1.9
CDT1Q9H211 BNIP3P6-201ENST00000549284 499 ntBASIC3.19□□□□□ -1.9
CDT1Q9H211 TRAV28-201ENST00000557548 323 ntBASIC3.19□□□□□ -1.9
CDT1Q9H211 LARP7P3-201ENST00000579888 337 ntBASIC3.19□□□□□ -1.9
CDT1Q9H211 MIR3942-201ENST00000585264 109 ntBASIC3.19□□□□□ -1.9
CDT1Q9H211 AL138889.2-201ENST00000603883 242 ntBASIC3.19□□□□□ -1.9
CDT1Q9H211 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.19□□□□□ -1.9
CDT1Q9H211 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.19□□□□□ -1.9
CDT1Q9H211 AC090574.1-201ENST00000623186 233 ntBASIC3.19□□□□□ -1.9
CDT1Q9H211 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CDT1Q9H211 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDT1Q9H211 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDT1Q9H211 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDT1Q9H211 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.19□□□□□ -1.9
CDT1Q9H211 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.18□□□□□ -1.9
CDT1Q9H211 AC090740.1-201ENST00000623193 2262 ntBASIC3.18□□□□□ -1.9
CDT1Q9H211 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.18□□□□□ -1.9
CDT1Q9H211 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CDT1Q9H211 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDT1Q9H211 SNORA80A-201ENST00000363922 136 ntBASIC3.18□□□□□ -1.9
CDT1Q9H211 Y_RNA.245-201ENST00000364493 95 ntBASIC3.18□□□□□ -1.9
CDT1Q9H211 SNORA9.2-201ENST00000365361 133 ntBASIC3.18□□□□□ -1.9
CDT1Q9H211 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CDT1Q9H211 COTL1P1-201ENST00000422309 375 ntBASIC3.18□□□□□ -1.9
CDT1Q9H211 AC025750.2-201ENST00000442609 450 ntBASIC3.18□□□□□ -1.9
CDT1Q9H211 AL135938.1-201ENST00000443141 297 ntBASIC3.18□□□□□ -1.9
CDT1Q9H211 UQCRHP3-201ENST00000451503 251 ntBASIC3.18□□□□□ -1.9
CDT1Q9H211 PPP1R2P5-201ENST00000457256 603 ntBASIC3.18□□□□□ -1.9
CDT1Q9H211 AL135752.1-201ENST00000479477 471 ntBASIC3.18□□□□□ -1.9
CDT1Q9H211 AC096576.1-201ENST00000489014 359 ntBASIC3.18□□□□□ -1.9
CDT1Q9H211 RPL30P5-201ENST00000494923 336 ntBASIC3.18□□□□□ -1.9
CDT1Q9H211 SUMO2P6-201ENST00000505273 288 ntBASIC3.18□□□□□ -1.9
CDT1Q9H211 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.18□□□□□ -1.9
CDT1Q9H211 RNU6-1088P-201ENST00000516850 104 ntBASIC3.18□□□□□ -1.9
CDT1Q9H211 RN7SKP256-201ENST00000517201 314 ntBASIC3.18□□□□□ -1.9
CDT1Q9H211 RNA5SP291-201ENST00000517222 105 ntBASIC3.18□□□□□ -1.9
CDT1Q9H211 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.18□□□□□ -1.9
CDT1Q9H211 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.18□□□□□ -1.9
CDT1Q9H211 BNIP3P25-201ENST00000596023 559 ntBASIC3.18□□□□□ -1.9
CDT1Q9H211 AC107294.1-201ENST00000609524 467 ntBASIC3.18□□□□□ -1.9
CDT1Q9H211 MIR6852-201ENST00000621699 66 ntBASIC3.18□□□□□ -1.9
CDT1Q9H211 AL512643.1-201ENST00000635735 524 ntBASIC3.18□□□□□ -1.9
CDT1Q9H211 MIR7153-201ENST00000637758 57 ntBASIC3.18□□□□□ -1.9
CDT1Q9H211 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.18□□□□□ -1.9
CDT1Q9H211 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.18□□□□□ -1.9
CDT1Q9H211 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDT1Q9H211 AC096644.4-201ENST00000563417 2912 ntBASIC3.18□□□□□ -1.9
CDT1Q9H211 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDT1Q9H211 RNU6-1252P-201ENST00000363054 104 ntBASIC3.17□□□□□ -1.9
CDT1Q9H211 U3.12-201ENST00000364498 214 ntBASIC3.17□□□□□ -1.9
CDT1Q9H211 snosnR66.1-201ENST00000391095 99 ntBASIC3.17□□□□□ -1.9
CDT1Q9H211 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.17□□□□□ -1.9
CDT1Q9H211 RNU4-26P-201ENST00000410270 107 ntBASIC3.17□□□□□ -1.9
CDT1Q9H211 RNU6-1304P-201ENST00000411374 106 ntBASIC3.17□□□□□ -1.9
CDT1Q9H211 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.17□□□□□ -1.9
CDT1Q9H211 GPM6BP2-201ENST00000432046 144 ntBASIC3.17□□□□□ -1.9
CDT1Q9H211 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.17□□□□□ -1.9
CDT1Q9H211 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.17□□□□□ -1.9
CDT1Q9H211 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.17□□□□□ -1.9
CDT1Q9H211 Z82210.1-201ENST00000440037 231 ntBASIC3.17□□□□□ -1.9
CDT1Q9H211 GPM6BP1-201ENST00000446387 144 ntBASIC3.17□□□□□ -1.9
CDT1Q9H211 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.17□□□□□ -1.9
CDT1Q9H211 CECR9-201ENST00000453421 199 ntBASIC3.17□□□□□ -1.9
CDT1Q9H211 Y_RNA.632-201ENST00000459189 102 ntBASIC3.17□□□□□ -1.9
CDT1Q9H211 RPL7P43-201ENST00000478876 753 ntBASIC3.17□□□□□ -1.9
CDT1Q9H211 AC009901.1-201ENST00000506703 541 ntBASIC3.17□□□□□ -1.9
CDT1Q9H211 AC010265.1-201ENST00000513509 211 ntBASIC3.17□□□□□ -1.9
CDT1Q9H211 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.17□□□□□ -1.9
CDT1Q9H211 Y_RNA.691-201ENST00000516611 103 ntBASIC3.17□□□□□ -1.9
CDT1Q9H211 RNU6-143P-201ENST00000516942 93 ntBASIC3.17□□□□□ -1.9
CDT1Q9H211 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.17□□□□□ -1.9
CDT1Q9H211 AP005597.4-201ENST00000526762 229 ntBASIC3.17□□□□□ -1.9
CDT1Q9H211 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.17□□□□□ -1.9
CDT1Q9H211 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.17□□□□□ -1.9
CDT1Q9H211 AC022432.1-201ENST00000595739 310 ntBASIC3.17□□□□□ -1.9
CDT1Q9H211 AL133393.1-201ENST00000603277 287 ntBASIC3.17□□□□□ -1.9
CDT1Q9H211 AC092807.2-201ENST00000609367 243 ntBASIC3.17□□□□□ -1.9
CDT1Q9H211 AC009570.1-201ENST00000609599 745 ntBASIC3.17□□□□□ -1.9
CDT1Q9H211 AC093913.1-201ENST00000614178 329 ntBASIC3.17□□□□□ -1.9
CDT1Q9H211 uc_338.34-201ENST00000617467 174 ntBASIC3.17□□□□□ -1.9
CDT1Q9H211 AP003400.5-201ENST00000624827 617 ntBASIC3.17□□□□□ -1.9
CDT1Q9H211 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDT1Q9H211 AL049641.1-201ENST00000441055 1948 ntBASIC3.17□□□□□ -1.9
CDT1Q9H211 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.17□□□□□ -1.9
CDT1Q9H211 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDT1Q9H211 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.16□□□□□ -1.9
CDT1Q9H211 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDT1Q9H211 SNORA18.3-201ENST00000384122 132 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 RNU6-851P-201ENST00000384565 107 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CDT1Q9H211 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDT1Q9H211 HSPE1P1-201ENST00000421494 318 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 TMEM167AP1-201ENST00000423409 219 ntBASIC3.16□□□□□ -1.9
CDT1Q9H211 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms