Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AL513478.4-201ENST00000641636 310 ntBASIC4.07□□□□□ -1.76
RNF38Q9H0F5 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.07□□□□□ -1.76
RNF38Q9H0F5 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
RNF38Q9H0F5 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.07□□□□□ -1.76
RNF38Q9H0F5 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
RNF38Q9H0F5 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF38Q9H0F5 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.06□□□□□ -1.76
RNF38Q9H0F5 AC106871.1-201ENST00000568324 3102 ntBASIC4.06□□□□□ -1.76
RNF38Q9H0F5 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RNF38Q9H0F5 UBE2L2-201ENST00000254302 429 ntBASIC4.06□□□□□ -1.76
RNF38Q9H0F5 Y_RNA.105-201ENST00000363182 111 ntBASIC4.06□□□□□ -1.76
RNF38Q9H0F5 SNORD27-201ENST00000363981 72 ntBASIC4.06□□□□□ -1.76
RNF38Q9H0F5 RNU6-512P-201ENST00000364438 103 ntBASIC4.06□□□□□ -1.76
RNF38Q9H0F5 SNORA73.2-201ENST00000364946 201 ntBASIC4.06□□□□□ -1.76
RNF38Q9H0F5 RNA5SP97-201ENST00000365006 84 ntBASIC4.06□□□□□ -1.76
RNF38Q9H0F5 U1.1-201ENST00000384101 164 ntBASIC4.06□□□□□ -1.76
RNF38Q9H0F5 RNU6-708P-201ENST00000384217 107 ntBASIC4.06□□□□□ -1.76
RNF38Q9H0F5 Y_RNA.471-201ENST00000384312 102 ntBASIC4.06□□□□□ -1.76
RNF38Q9H0F5 MIR1251-201ENST00000408552 70 ntBASIC4.06□□□□□ -1.76
RNF38Q9H0F5 AL353621.1-201ENST00000418219 243 ntBASIC4.06□□□□□ -1.76
RNF38Q9H0F5 YPEL5P1-201ENST00000419731 367 ntBASIC4.06□□□□□ -1.76
RNF38Q9H0F5 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RNF38Q9H0F5 AC091390.3-201ENST00000426478 338 ntBASIC4.06□□□□□ -1.76
RNF38Q9H0F5 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.06□□□□□ -1.76
RNF38Q9H0F5 HSPD1P21-201ENST00000436541 245 ntBASIC4.06□□□□□ -1.76
RNF38Q9H0F5 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.06□□□□□ -1.76
RNF38Q9H0F5 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.06□□□□□ -1.76
RNF38Q9H0F5 TRBVB-201ENST00000477100 408 ntBASIC4.06□□□□□ -1.76
RNF38Q9H0F5 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.06□□□□□ -1.76
RNF38Q9H0F5 AC025554.1-201ENST00000505641 188 ntBASIC4.06□□□□□ -1.76
RNF38Q9H0F5 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.06□□□□□ -1.76
RNF38Q9H0F5 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.06□□□□□ -1.76
RNF38Q9H0F5 CPDP1-201ENST00000579660 283 ntBASIC4.06□□□□□ -1.76
RNF38Q9H0F5 AC110741.2-201ENST00000605278 268 ntBASIC4.06□□□□□ -1.76
RNF38Q9H0F5 AC137590.2-201ENST00000619709 240 ntBASIC4.06□□□□□ -1.76
RNF38Q9H0F5 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.06□□□□□ -1.76
RNF38Q9H0F5 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RNF38Q9H0F5 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
RNF38Q9H0F5 MIR521-1-201ENST00000384902 87 ntBASIC4.05□□□□□ -1.76
RNF38Q9H0F5 MIR670-201ENST00000390142 98 ntBASIC4.05□□□□□ -1.76
RNF38Q9H0F5 AL138878.1-201ENST00000405131 347 ntBASIC4.05□□□□□ -1.76
RNF38Q9H0F5 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.05□□□□□ -1.76
RNF38Q9H0F5 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RNF38Q9H0F5 AC092573.2-201ENST00000434546 243 ntBASIC4.05□□□□□ -1.76
RNF38Q9H0F5 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.05□□□□□ -1.76
RNF38Q9H0F5 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.05□□□□□ -1.76
RNF38Q9H0F5 AL133547.1-201ENST00000448546 220 ntBASIC4.05□□□□□ -1.76
RNF38Q9H0F5 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.05□□□□□ -1.76
RNF38Q9H0F5 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RNF38Q9H0F5 LINC01399-202ENST00000458450 244 ntBASIC4.05□□□□□ -1.76
RNF38Q9H0F5 AC022493.1-201ENST00000492984 337 ntBASIC4.05□□□□□ -1.76
RNF38Q9H0F5 AC008716.1-201ENST00000511084 513 ntBASIC4.05□□□□□ -1.76
RNF38Q9H0F5 RNU1-61P-201ENST00000516107 151 ntBASIC4.05□□□□□ -1.76
RNF38Q9H0F5 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.05□□□□□ -1.76
RNF38Q9H0F5 AL360157.1-201ENST00000565962 87 ntBASIC4.05□□□□□ -1.76
RNF38Q9H0F5 AC087499.8-201ENST00000578406 226 ntBASIC4.05□□□□□ -1.76
RNF38Q9H0F5 AL110115.1-201ENST00000614396 364 ntBASIC4.05□□□□□ -1.76
RNF38Q9H0F5 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.05□□□□□ -1.76
RNF38Q9H0F5 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.05□□□□□ -1.76
RNF38Q9H0F5 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.05□□□□□ -1.76
RNF38Q9H0F5 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNF38Q9H0F5 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNF38Q9H0F5 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.04□□□□□ -1.76
RNF38Q9H0F5 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF38Q9H0F5 U8.8-201ENST00000365399 135 ntBASIC4.04□□□□□ -1.76
RNF38Q9H0F5 SAR1AP2-201ENST00000392696 594 ntBASIC4.04□□□□□ -1.76
RNF38Q9H0F5 SNORA57.3-201ENST00000411095 141 ntBASIC4.04□□□□□ -1.76
RNF38Q9H0F5 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.04□□□□□ -1.76
RNF38Q9H0F5 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.04□□□□□ -1.76
RNF38Q9H0F5 AC009237.8-201ENST00000445492 379 ntBASIC4.04□□□□□ -1.76
RNF38Q9H0F5 FCF1P4-201ENST00000448326 183 ntBASIC4.04□□□□□ -1.76
RNF38Q9H0F5 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.04□□□□□ -1.76
RNF38Q9H0F5 RPL21P11-201ENST00000461458 483 ntBASIC4.04□□□□□ -1.76
RNF38Q9H0F5 AC087588.1-201ENST00000462203 316 ntBASIC4.04□□□□□ -1.76
RNF38Q9H0F5 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.04□□□□□ -1.76
RNF38Q9H0F5 RPS20P22-201ENST00000473700 357 ntBASIC4.04□□□□□ -1.76
RNF38Q9H0F5 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.04□□□□□ -1.76
RNF38Q9H0F5 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.04□□□□□ -1.76
RNF38Q9H0F5 NDUFB4P9-201ENST00000511646 388 ntBASIC4.04□□□□□ -1.76
RNF38Q9H0F5 RNA5SP143-201ENST00000516936 115 ntBASIC4.04□□□□□ -1.76
RNF38Q9H0F5 RNU6-1315P-201ENST00000517187 99 ntBASIC4.04□□□□□ -1.76
RNF38Q9H0F5 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.04□□□□□ -1.76
RNF38Q9H0F5 RRN3P3-201ENST00000549207 578 ntBASIC4.04□□□□□ -1.76
RNF38Q9H0F5 SYF2P1-201ENST00000550658 413 ntBASIC4.04□□□□□ -1.76
RNF38Q9H0F5 HMGB1P14-201ENST00000557424 591 ntBASIC4.04□□□□□ -1.76
RNF38Q9H0F5 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.04□□□□□ -1.76
RNF38Q9H0F5 AC034102.8-201ENST00000615146 484 ntBASIC4.04□□□□□ -1.76
RNF38Q9H0F5 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.04□□□□□ -1.76
RNF38Q9H0F5 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.04□□□□□ -1.76
RNF38Q9H0F5 HSPA8P1-201ENST00000425843 1833 ntBASIC4.04□□□□□ -1.76
RNF38Q9H0F5 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF38Q9H0F5 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF38Q9H0F5 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF38Q9H0F5 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RNF38Q9H0F5 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.03□□□□□ -1.76
RNF38Q9H0F5 NCAPGP1-201ENST00000505112 1814 ntBASIC4.03□□□□□ -1.76
RNF38Q9H0F5 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RNF38Q9H0F5 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RNF38Q9H0F5 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RNF38Q9H0F5 RPL9P7-201ENST00000330965 580 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms