| BEGAIN | Q9BUH8 | AP001605.1-201 | ENST00000420186 | 2603 nt | TSL 1 (best) BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | AC092376.2-201 | ENST00000622621 | 4116 nt | BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | SNORD115-8-201 | ENST00000363856 | 82 nt | BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | RNU6-961P-201 | ENST00000363893 | 105 nt | BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | SNORD115-38-201 | ENST00000365037 | 82 nt | BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | Y_RNA.331-201 | ENST00000365267 | 102 nt | BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | RNU1-73P-201 | ENST00000383971 | 164 nt | BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | Y_RNA.435-201 | ENST00000384095 | 112 nt | BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | TRAJ38-201 | ENST00000390499 | 62 nt | APPRIS P1 BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | RNU6-394P-201 | ENST00000410735 | 107 nt | BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | AC074117.2-201 | ENST00000417130 | 397 nt | BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | AL358075.3-201 | ENST00000426289 | 226 nt | BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | GPM6BP3-201 | ENST00000442797 | 145 nt | BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | SNORD2.1-201 | ENST00000458762 | 69 nt | BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | AC016632.1-201 | ENST00000503994 | 196 nt | BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | SNORA40.9-201 | ENST00000515895 | 93 nt | BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | RNU4ATAC18P-201 | ENST00000516179 | 126 nt | BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | Y_RNA.719-201 | ENST00000517156 | 106 nt | BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | SNORA70.24-201 | ENST00000517233 | 118 nt | BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | LINC01570-201 | ENST00000561572 | 434 nt | TSL 3 BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | USP32P2-207 | ENST00000608376 | 253 nt | TSL 5 BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | MIR6134-201 | ENST00000617606 | 109 nt | BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | LRRC37A-203 | ENST00000496930 | 3860 nt | TSL 2 BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | RALGAPA1-204 | ENST00000553892 | 6271 nt | TSL 5 BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | CYLD-212 | ENST00000568704 | 3292 nt | TSL 5 BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | RAPGEF6-201 | ENST00000296859 | 5618 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | SLC9C1-201 | ENST00000305815 | 4172 nt | APPRIS P3 TSL 2 BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | OFD1P6Y-202 | ENST00000451061 | 2724 nt | BASIC | 5.39 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | PDS5B-201 | ENST00000315596 | 7497 nt | APPRIS P1 TSL 1 (best) BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | AC135776.4-201 | ENST00000624300 | 1904 nt | BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | PTER-201 | ENST00000298942 | 3448 nt | TSL 5 BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | THOC1-219 | ENST00000616322 | 2078 nt | APPRIS ALT1 TSL 5 BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | OR13G1-202 | ENST00000642119 | 2568 nt | APPRIS P1 BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | WDR5B-201 | ENST00000330689 | 3720 nt | APPRIS P1 BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | ADGRL2-207 | ENST00000370723 | 5254 nt | TSL 5 BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | ADGRL2-208 | ENST00000370725 | 5293 nt | APPRIS ALT2 TSL 5 BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | RNU1-140P-201 | ENST00000365040 | 165 nt | BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | RNU6-804P-201 | ENST00000384286 | 107 nt | BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | RPL21P66-201 | ENST00000426566 | 466 nt | BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | CYP1B1-AS1-202 | ENST00000427168 | 484 nt | TSL 4 BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | SETP5-201 | ENST00000437270 | 562 nt | BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | AC007969.2-201 | ENST00000441891 | 191 nt | BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | AL162151.2-201 | ENST00000448875 | 158 nt | BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | AC025741.1-201 | ENST00000506100 | 544 nt | TSL 4 BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | AP005660.1-201 | ENST00000522972 | 293 nt | BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | DEFB131B-201 | ENST00000530210 | 213 nt | APPRIS P1 TSL 1 (best) BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | AC010197.1-201 | ENST00000541860 | 578 nt | TSL 4 BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | HSPE1P4-201 | ENST00000550617 | 308 nt | BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | AC005176.2-201 | ENST00000596933 | 147 nt | BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | AC012468.1-201 | ENST00000604888 | 430 nt | BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | AL138721.1-201 | ENST00000616756 | 179 nt | BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | OR4C16-201 | ENST00000623907 | 933 nt | APPRIS P1 BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | FAM184A-204 | ENST00000368475 | 3392 nt | TSL 2 BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | MOXD1-201 | ENST00000336749 | 2950 nt | TSL 1 (best) BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | ATP13A3-211 | ENST00000619199 | 5227 nt | TSL 2 BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | PCDH15-206 | ENST00000373965 | 9237 nt | APPRIS ALT2 TSL 5 BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | ELF2-203 | ENST00000379550 | 3278 nt | TSL 5 BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | ERI2-202 | ENST00000357967 | 3499 nt | APPRIS P1 TSL 5 BASIC | 5.38 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | DNAH6-202 | ENST00000389394 | 12795 nt | APPRIS P1 TSL 5 BASIC | 5.37 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | AGBL2-201 | ENST00000357610 | 3295 nt | APPRIS ALT2 TSL 5 BASIC | 5.37 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | SMC2-AS1-201 | ENST00000603487 | 7020 nt | TSL 2 BASIC | 5.37 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | MYO9A-209 | ENST00000564571 | 8111 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.37 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | SYTL2-217 | ENST00000528231 | 3536 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.37 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | RNA5SP197-201 | ENST00000363357 | 119 nt | BASIC | 5.37 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | RNU6-923P-201 | ENST00000364753 | 107 nt | BASIC | 5.37 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | AL139254.1-201 | ENST00000421114 | 376 nt | TSL 3 BASIC | 5.37 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | AC125238.1-201 | ENST00000448842 | 249 nt | BASIC | 5.37 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | AC099794.1-201 | ENST00000450811 | 447 nt | TSL 3 BASIC | 5.37 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | AL691482.1-201 | ENST00000453255 | 87 nt | BASIC | 5.37 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | RPL21P9-201 | ENST00000556149 | 474 nt | BASIC | 5.37 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | GMFG-202 | ENST00000594700 | 397 nt | TSL 2 BASIC | 5.37 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | KLKP1-201 | ENST00000595979 | 403 nt | BASIC | 5.37 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | C2orf78-201 | ENST00000409561 | 3045 nt | APPRIS P1 TSL 2 BASIC | 5.37 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | OR8J3-204 | ENST00000642058 | 3806 nt | APPRIS P1 BASIC | 5.37 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | AFTPH-204 | ENST00000409933 | 2811 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.37 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | PTPN22-203 | ENST00000460620 | 1794 nt | TSL 1 (best) BASIC | 5.37 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | NEGR1-201 | ENST00000306821 | 5577 nt | TSL 1 (best) BASIC | 5.37 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | MAPK10-349 | ENST00000641767 | 3661 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | FZD6-205 | ENST00000522566 | 3719 nt | APPRIS P1 TSL 1 (best) BASIC | 5.36 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | Z94721.2-201 | ENST00000609590 | 5310 nt | TSL 2 BASIC | 5.36 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | DLX6-AS1-201 | ENST00000430027 | 15364 nt | TSL 2 BASIC | 5.36 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | RNU5F-3P-201 | ENST00000363767 | 117 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | RNU6-1141P-201 | ENST00000364520 | 107 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | RNU1-100P-201 | ENST00000365255 | 165 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | MIR493-201 | ENST00000385254 | 89 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | AL356535.1-201 | ENST00000440335 | 398 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | AC007099.2-201 | ENST00000444852 | 336 nt | TSL 5 BASIC | 5.36 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | MRPS10P1-201 | ENST00000448483 | 130 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | AL133547.1-201 | ENST00000448546 | 220 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | SCARNA10-201 | ENST00000459255 | 330 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | RPS4XP22-201 | ENST00000480755 | 780 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | RPL36AP41-201 | ENST00000493820 | 306 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | RN7SL558P-201 | ENST00000497468 | 299 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | AC068992.1-201 | ENST00000521411 | 543 nt | TSL 5 BASIC | 5.36 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | AL355076.2-201 | ENST00000555736 | 544 nt | TSL 5 BASIC | 5.36 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | AC012229.1-201 | ENST00000558699 | 499 nt | TSL 4 BASIC | 5.36 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | AC007179.3-201 | ENST00000604976 | 235 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | MIR6839-201 | ENST00000620425 | 113 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | MIR8059-201 | ENST00000620427 | 81 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| BEGAIN | Q9BUH8 | MBNL1-218 | ENST00000485910 | 4257 nt | TSL 1 (best) BASIC | 5.36 | □□□□□ -1.55 | | |