Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 Y_RNA.598-201ENST00000410480 95 ntBASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 AL030996.1-201ENST00000411430 235 ntBASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC009961.2-201ENST00000435771 251 ntBASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC092001.1-201ENST00000453012 261 ntBASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 RNA5SP233-201ENST00000459153 113 ntBASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 MTND3P7-201ENST00000474435 343 ntBASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 RPL22P13-201ENST00000493291 347 ntBASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 Y_RNA.672-201ENST00000516289 104 ntBASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 RNA5SP364-201ENST00000516938 78 ntBASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 IGKV3-31-201ENST00000523109 329 ntBASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 FAM92A1P1-201ENST00000528023 890 ntBASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC118273.2-201ENST00000532092 465 ntBASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC009063.1-201ENST00000563342 702 ntBASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 AL138963.2-201ENST00000605137 226 ntBASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC068276.1-201ENST00000605793 379 ntBASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 MIR15A-201ENST00000607334 83 ntBASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 MIR6134-201ENST00000617606 109 ntBASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 U6.99-201ENST00000637524 83 ntBASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 CDC27P3-201ENST00000635418 1910 ntBASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 Z75746.1-201ENST00000440243 2080 ntBASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 RNU6-166P-201ENST00000384371 107 ntBASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 MT-TH-201ENST00000387441 69 ntBASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 SNORA26.8-201ENST00000391306 124 ntBASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 RNU6-248P-201ENST00000410720 107 ntBASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 AL139156.1-201ENST00000412785 841 ntBASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC097463.2-201ENST00000421074 142 ntBASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 AL591212.2-201ENST00000433923 257 ntBASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC104850.1-201ENST00000435940 476 ntBASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 RPS27AP8-201ENST00000452665 445 ntBASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 MTCYBP1-201ENST00000454315 1119 ntBASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 RNU6-953P-201ENST00000459154 107 ntBASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 SNORA59A-201ENST00000459326 152 ntBASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 RNU6-1315P-201ENST00000517187 99 ntBASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC011979.2-201ENST00000527568 352 ntBASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 MIR1273C-201ENST00000578669 77 ntBASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC025165.5-201ENST00000602802 578 ntBASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 BNIP3P9-201ENST00000603714 553 ntBASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 AL022154.1-201ENST00000604698 785 ntBASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 FRG1KP-201ENST00000623592 341 ntBASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC091932.3-201ENST00000624223 323 ntBASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC103710.2-202ENST00000641454 2853 ntBASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 RPS3AP36-201ENST00000398190 775 ntBASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 RPS3AP3-201ENST00000411933 242 ntBASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC006366.1-201ENST00000422002 759 ntBASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 AL356320.1-201ENST00000429616 163 ntBASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 MTND4P25-201ENST00000441039 533 ntBASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 GAPDHP17-201ENST00000449858 1001 ntBASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 AL441985.1-201ENST00000457727 251 ntBASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 SNORD42A-201ENST00000459584 64 ntBASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 RPL36AP48-201ENST00000485521 314 ntBASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC018437.1-201ENST00000492214 406 ntBASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC116655.1-201ENST00000508324 901 ntBASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC119751.5-201ENST00000514077 770 ntBASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 SMURF2P1-201ENST00000514992 481 ntBASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 SCARNA24.1-201ENST00000516465 137 ntBASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 RNU7-51P-201ENST00000516560 62 ntBASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 Y_RNA.689-201ENST00000516589 107 ntBASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 SNORA31.25-201ENST00000517242 134 ntBASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC090572.1-201ENST00000519251 160 ntBASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 AP003072.2-201ENST00000527756 676 ntBASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC012213.3-201ENST00000577199 777 ntBASIC1.53□□□□□ -2.16
SHANK2-AS3Q9BTD1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms