Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 NCOR1P3-201ENST00000420479 303 ntBASIC0.67□□□□□ -2.3
ABCA3Q99758 DYNLT3P2-201ENST00000442517 295 ntBASIC0.67□□□□□ -2.3
ABCA3Q99758 CYP2C59P-201ENST00000457790 269 ntBASIC0.67□□□□□ -2.3
ABCA3Q99758 LARP1BP2-201ENST00000486594 519 ntBASIC0.67□□□□□ -2.3
ABCA3Q99758 AC079140.2-201ENST00000506193 142 ntBASIC0.67□□□□□ -2.3
ABCA3Q99758 AC034114.1-201ENST00000520293 285 ntBASIC0.67□□□□□ -2.3
ABCA3Q99758 AP003327.1-201ENST00000529684 127 ntBASIC0.67□□□□□ -2.3
ABCA3Q99758 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.67□□□□□ -2.3
ABCA3Q99758 MIR8065-201ENST00000620577 100 ntBASIC0.67□□□□□ -2.3
ABCA3Q99758 AC087821.2-201ENST00000637086 450 ntBASIC0.67□□□□□ -2.3
ABCA3Q99758 MIR329-2-201ENST00000385029 84 ntBASIC0.67□□□□□ -2.3
ABCA3Q99758 AL590383.1-201ENST00000428602 75 ntBASIC0.67□□□□□ -2.3
ABCA3Q99758 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.67□□□□□ -2.3
ABCA3Q99758 Z82210.1-201ENST00000440037 231 ntBASIC0.67□□□□□ -2.3
ABCA3Q99758 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.67□□□□□ -2.3
ABCA3Q99758 RPL26P6-201ENST00000440913 438 ntBASIC0.67□□□□□ -2.3
ABCA3Q99758 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.67□□□□□ -2.3
ABCA3Q99758 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.67□□□□□ -2.3
ABCA3Q99758 SNORD116-28-201ENST00000516123 91 ntBASIC0.67□□□□□ -2.3
ABCA3Q99758 MIR6130-201ENST00000619419 109 ntBASIC0.67□□□□□ -2.3
ABCA3Q99758 RNU5A-1-201ENST00000362698 116 ntBASIC0.66□□□□□ -2.3
ABCA3Q99758 RNU1-124P-201ENST00000363861 145 ntBASIC0.66□□□□□ -2.3
ABCA3Q99758 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
ABCA3Q99758 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
ABCA3Q99758 RNU2-49P-201ENST00000410666 184 ntBASIC0.66□□□□□ -2.3
ABCA3Q99758 NDUFB4P7-201ENST00000423198 363 ntBASIC0.66□□□□□ -2.3
ABCA3Q99758 MTCO2P20-201ENST00000437339 673 ntBASIC0.66□□□□□ -2.3
ABCA3Q99758 RAB11AP1-201ENST00000442978 646 ntBASIC0.66□□□□□ -2.3
ABCA3Q99758 AC068135.1-201ENST00000446164 246 ntBASIC0.66□□□□□ -2.3
ABCA3Q99758 AL359212.1-201ENST00000556608 614 ntBASIC0.66□□□□□ -2.3
ABCA3Q99758 AC005261.5-201ENST00000596280 355 ntBASIC0.66□□□□□ -2.3
ABCA3Q99758 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
ABCA3Q99758 RNU6-251P-201ENST00000363235 104 ntBASIC0.65□□□□□ -2.31
ABCA3Q99758 RNU6-1164P-201ENST00000364428 107 ntBASIC0.65□□□□□ -2.31
ABCA3Q99758 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.65□□□□□ -2.31
ABCA3Q99758 AP003122.4-201ENST00000530980 758 ntBASIC0.65□□□□□ -2.31
ABCA3Q99758 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.65□□□□□ -2.31
ABCA3Q99758 AL355472.4-201ENST00000610233 626 ntBASIC0.65□□□□□ -2.31
ABCA3Q99758 MIR5087-201ENST00000635826 76 ntBASIC0.65□□□□□ -2.31
ABCA3Q99758 U6.107-201ENST00000637108 79 ntBASIC0.65□□□□□ -2.31
ABCA3Q99758 AC017104.5-201ENST00000637647 639 ntBASIC0.65□□□□□ -2.31
ABCA3Q99758 RNU6-271P-201ENST00000363858 105 ntBASIC0.64□□□□□ -2.31
ABCA3Q99758 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.64□□□□□ -2.31
ABCA3Q99758 RNU6-444P-201ENST00000383988 108 ntBASIC0.64□□□□□ -2.31
ABCA3Q99758 RNU2-43P-201ENST00000410306 190 ntBASIC0.64□□□□□ -2.31
ABCA3Q99758 LINC01347-201ENST00000417964 355 ntBASIC0.64□□□□□ -2.31
ABCA3Q99758 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.64□□□□□ -2.31
ABCA3Q99758 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.64□□□□□ -2.31
ABCA3Q99758 GTF2IP12-201ENST00000456547 356 ntBASIC0.64□□□□□ -2.31
ABCA3Q99758 snoU13.9-201ENST00000458927 103 ntBASIC0.64□□□□□ -2.31
ABCA3Q99758 RNU6-491P-201ENST00000516099 110 ntBASIC0.64□□□□□ -2.31
ABCA3Q99758 AL022067.1-201ENST00000602426 454 ntBASIC0.64□□□□□ -2.31
ABCA3Q99758 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.64□□□□□ -2.31
ABCA3Q99758 SUMO2P14-201ENST00000604488 293 ntBASIC0.64□□□□□ -2.31
ABCA3Q99758 AL022345.1-201ENST00000607292 135 ntBASIC0.64□□□□□ -2.31
ABCA3Q99758 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.64□□□□□ -2.31
ABCA3Q99758 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
ABCA3Q99758 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
ABCA3Q99758 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.64□□□□□ -2.31
ABCA3Q99758 RNU6-968P-201ENST00000384076 107 ntBASIC0.64□□□□□ -2.31
ABCA3Q99758 SNORA51.6-201ENST00000384151 125 ntBASIC0.64□□□□□ -2.31
ABCA3Q99758 AC010385.1-201ENST00000412374 256 ntBASIC0.64□□□□□ -2.31
ABCA3Q99758 AL606490.4-201ENST00000423117 127 ntBASIC0.64□□□□□ -2.31
ABCA3Q99758 ZNF863P-201ENST00000426746 417 ntBASIC0.64□□□□□ -2.31
ABCA3Q99758 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.64□□□□□ -2.31
ABCA3Q99758 AC098831.1-201ENST00000440661 216 ntBASIC0.64□□□□□ -2.31
ABCA3Q99758 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.64□□□□□ -2.31
ABCA3Q99758 RPL9P9-202ENST00000466501 579 ntBASIC0.64□□□□□ -2.31
ABCA3Q99758 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.64□□□□□ -2.31
ABCA3Q99758 AC004817.2-201ENST00000561794 651 ntBASIC0.64□□□□□ -2.31
ABCA3Q99758 AC090079.2-201ENST00000575289 768 ntBASIC0.64□□□□□ -2.31
ABCA3Q99758 BNIP3P23-201ENST00000599655 511 ntBASIC0.64□□□□□ -2.31
ABCA3Q99758 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.64□□□□□ -2.31
ABCA3Q99758 RNU6-486P-201ENST00000363116 107 ntBASIC0.63□□□□□ -2.31
ABCA3Q99758 RNU4-67P-201ENST00000364569 141 ntBASIC0.63□□□□□ -2.31
ABCA3Q99758 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.63□□□□□ -2.31
ABCA3Q99758 Y_RNA.549-201ENST00000384657 102 ntBASIC0.63□□□□□ -2.31
ABCA3Q99758 MIR515-2-201ENST00000384883 83 ntBASIC0.63□□□□□ -2.31
ABCA3Q99758 MIR515-1-201ENST00000384884 83 ntBASIC0.63□□□□□ -2.31
ABCA3Q99758 RPS27P16-201ENST00000425758 201 ntBASIC0.63□□□□□ -2.31
ABCA3Q99758 C1DP1-201ENST00000426049 402 ntBASIC0.63□□□□□ -2.31
ABCA3Q99758 MTCO3P5-201ENST00000433620 714 ntBASIC0.63□□□□□ -2.31
ABCA3Q99758 SNRPEP7-201ENST00000438350 220 ntBASIC0.63□□□□□ -2.31
ABCA3Q99758 RPL36AP48-201ENST00000485521 314 ntBASIC0.63□□□□□ -2.31
ABCA3Q99758 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.63□□□□□ -2.31
ABCA3Q99758 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.63□□□□□ -2.31
ABCA3Q99758 AC093510.2-201ENST00000562820 896 ntBASIC0.63□□□□□ -2.31
ABCA3Q99758 ELOCP5-201ENST00000604924 333 ntBASIC0.63□□□□□ -2.31
ABCA3Q99758 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.63□□□□□ -2.31
ABCA3Q99758 AC016542.1-201ENST00000608259 493 ntBASIC0.63□□□□□ -2.31
ABCA3Q99758 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.62□□□□□ -2.31
ABCA3Q99758 SNORA2A-201ENST00000383885 135 ntBASIC0.62□□□□□ -2.31
ABCA3Q99758 SNORA29-201ENST00000384183 140 ntBASIC0.62□□□□□ -2.31
ABCA3Q99758 RNU2-15P-201ENST00000410692 191 ntBASIC0.62□□□□□ -2.31
ABCA3Q99758 PIGFP2-201ENST00000421400 651 ntBASIC0.62□□□□□ -2.31
ABCA3Q99758 RPP40P1-201ENST00000426762 456 ntBASIC0.62□□□□□ -2.31
ABCA3Q99758 AL035666.1-201ENST00000446195 348 ntBASIC0.62□□□□□ -2.31
ABCA3Q99758 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.62□□□□□ -2.31
ABCA3Q99758 SCARNA15.2-201ENST00000516409 127 ntBASIC0.62□□□□□ -2.31
ABCA3Q99758 SNORA48.9-201ENST00000516419 162 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms