Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 RNU6-581P-201ENST00000516214 105 ntBASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 AC009902.1-201ENST00000519351 183 ntBASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 IGKV3-31-201ENST00000523109 329 ntBASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 AC018714.1-201ENST00000605028 208 ntBASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 AL136370.1-201ENST00000608166 691 ntBASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 AL365204.3-201ENST00000612448 685 ntBASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 FRG1KP-201ENST00000623592 341 ntBASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 MTND5P42-201ENST00000637720 498 ntBASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
PKNOX2Q96KN3 TEX21P-201ENST00000447107 1476 ntBASIC1.97□□□□□ -2.09
PKNOX2Q96KN3 RNU2-36P-201ENST00000410361 191 ntBASIC1.97□□□□□ -2.09
PKNOX2Q96KN3 AC127391.1-201ENST00000411737 98 ntBASIC1.97□□□□□ -2.09
PKNOX2Q96KN3 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.97□□□□□ -2.09
PKNOX2Q96KN3 HMGB3P12-201ENST00000438745 556 ntBASIC1.97□□□□□ -2.09
PKNOX2Q96KN3 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.97□□□□□ -2.09
PKNOX2Q96KN3 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.97□□□□□ -2.09
PKNOX2Q96KN3 AL606662.1-201ENST00000445763 553 ntBASIC1.97□□□□□ -2.09
PKNOX2Q96KN3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.97□□□□□ -2.09
PKNOX2Q96KN3 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.97□□□□□ -2.09
PKNOX2Q96KN3 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.97□□□□□ -2.09
PKNOX2Q96KN3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.97□□□□□ -2.09
PKNOX2Q96KN3 MIR4782-201ENST00000577987 79 ntBASIC1.97□□□□□ -2.09
PKNOX2Q96KN3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.97□□□□□ -2.09
PKNOX2Q96KN3 MIR5089-201ENST00000580047 84 ntBASIC1.97□□□□□ -2.09
PKNOX2Q96KN3 MIR3618-201ENST00000580330 88 ntBASIC1.97□□□□□ -2.09
PKNOX2Q96KN3 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.97□□□□□ -2.09
PKNOX2Q96KN3 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.97□□□□□ -2.09
PKNOX2Q96KN3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.97□□□□□ -2.09
PKNOX2Q96KN3 AP000860.1-201ENST00000605250 559 ntBASIC1.97□□□□□ -2.09
PKNOX2Q96KN3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.97□□□□□ -2.09
PKNOX2Q96KN3 TUSC7.1-201ENST00000610969 165 ntBASIC1.97□□□□□ -2.09
PKNOX2Q96KN3 AL589994.2-201ENST00000621124 579 ntBASIC1.97□□□□□ -2.09
PKNOX2Q96KN3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 AL136360.1-201ENST00000503377 1900 ntBASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 RNU6-660P-201ENST00000364566 109 ntBASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 SMIM11P1-201ENST00000369586 178 ntBASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 Y_RNA.534-201ENST00000384599 112 ntBASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 MIR301A-201ENST00000385261 86 ntBASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 RPL23AP39-201ENST00000415533 405 ntBASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 RPS27AP14-201ENST00000422868 454 ntBASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 SDAD1P3-201ENST00000427380 333 ntBASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 RPL37P21-201ENST00000435890 276 ntBASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 AL354941.1-201ENST00000438600 464 ntBASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 GDI2P2-201ENST00000445131 608 ntBASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 AC079448.1-201ENST00000449377 373 ntBASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 MTAPP1-201ENST00000489154 819 ntBASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 AC116347.2-201ENST00000514912 523 ntBASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 MTND2P32-201ENST00000521584 1038 ntBASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 MIR3162-201ENST00000581818 82 ntBASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 AP000811.1-201ENST00000603803 651 ntBASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 AC144521.1-201ENST00000607148 956 ntBASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 AC103710.2-201ENST00000609912 942 ntBASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 AC022960.3-201ENST00000619794 441 ntBASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 AL356266.1-201ENST00000623311 483 ntBASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 AL512643.1-201ENST00000635735 524 ntBASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
PKNOX2Q96KN3 ZNF680P1-201ENST00000436625 1469 ntBASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 AC092104.1-201ENST00000497346 1441 ntBASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 Y_RNA.67-201ENST00000362870 100 ntBASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 RNU5E-6P-201ENST00000365574 115 ntBASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 FCF1P10-201ENST00000407590 479 ntBASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 AL591704.1-201ENST00000432574 275 ntBASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 HMGN2P23-201ENST00000456759 269 ntBASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 SNORD11.1-201ENST00000459482 85 ntBASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 AC116655.1-201ENST00000508324 901 ntBASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 RNU6-572P-201ENST00000516724 80 ntBASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 RNU6-1092P-201ENST00000516955 87 ntBASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 AC107934.1-201ENST00000522215 217 ntBASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 PSMA3P-201ENST00000555485 635 ntBASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 AC021646.1-201ENST00000605469 484 ntBASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 RMST_6.1-201ENST00000611980 203 ntBASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 AL359314.1-201ENST00000616913 261 ntBASIC1.95□□□□□ -2.1
PKNOX2Q96KN3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms