Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX11Q96FC9 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
DDX11Q96FC9 FTH1P25-201ENST00000447665 469 ntBASIC4.23□□□□□ -1.73
DDX11Q96FC9 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX11Q96FC9 RPL9P32-201ENST00000464118 620 ntBASIC4.23□□□□□ -1.73
DDX11Q96FC9 HMGB1P22-201ENST00000505315 124 ntBASIC4.23□□□□□ -1.73
DDX11Q96FC9 NDUFB4P9-201ENST00000511646 388 ntBASIC4.23□□□□□ -1.73
DDX11Q96FC9 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.23□□□□□ -1.73
DDX11Q96FC9 RNU6-677P-201ENST00000516914 101 ntBASIC4.23□□□□□ -1.73
DDX11Q96FC9 RN7SKP258-201ENST00000517151 304 ntBASIC4.23□□□□□ -1.73
DDX11Q96FC9 ERHP1-201ENST00000523006 310 ntBASIC4.23□□□□□ -1.73
DDX11Q96FC9 SUB1P3-201ENST00000564581 315 ntBASIC4.23□□□□□ -1.73
DDX11Q96FC9 MIR4738-201ENST00000579134 87 ntBASIC4.23□□□□□ -1.73
DDX11Q96FC9 AL355297.3-201ENST00000604082 446 ntBASIC4.23□□□□□ -1.73
DDX11Q96FC9 AL021879.1-201ENST00000611756 288 ntBASIC4.23□□□□□ -1.73
DDX11Q96FC9 U2.1-201ENST00000618978 145 ntBASIC4.23□□□□□ -1.73
DDX11Q96FC9 AL606534.2-204ENST00000635008 178 ntBASIC4.23□□□□□ -1.73
DDX11Q96FC9 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
DDX11Q96FC9 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
DDX11Q96FC9 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
DDX11Q96FC9 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
DDX11Q96FC9 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
DDX11Q96FC9 RNA5SP50-201ENST00000363731 107 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 RNA5SP42-201ENST00000364278 115 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 Y_RNA.257-201ENST00000364596 102 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 Y_RNA.380-201ENST00000365663 111 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
DDX11Q96FC9 RNVU1-14-201ENST00000384770 164 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 MIR578-201ENST00000384828 96 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 HSPE1P26-201ENST00000405341 275 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX11Q96FC9 AC002075.2-201ENST00000425207 252 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 UBE2V1P4-201ENST00000425374 344 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 AC017083.1-201ENST00000428093 483 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.22□□□□□ -1.73
DDX11Q96FC9 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 AL591212.2-201ENST00000433923 257 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 AC099799.1-201ENST00000439809 192 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 AL360271.2-201ENST00000447710 161 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 AL136097.1-201ENST00000456945 913 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 RPL21P41-201ENST00000459863 264 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 RPL23AP14-201ENST00000468281 468 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 AC084357.1-201ENST00000473404 255 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 AC107222.1-201ENST00000510899 637 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 RNU6-388P-201ENST00000517012 105 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 RNU6-389P-201ENST00000517048 105 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
DDX11Q96FC9 IGKV2-23-201ENST00000518729 323 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 AC022616.4-201ENST00000522985 181 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX11Q96FC9 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.22□□□□□ -1.73
DDX11Q96FC9 AC005357.1-201ENST00000588399 301 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 AC006077.1-201ENST00000604746 343 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 SDR42E1P2-201ENST00000614861 481 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.22□□□□□ -1.73
DDX11Q96FC9 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
DDX11Q96FC9 AL133383.2-201ENST00000622958 2336 ntBASIC4.22□□□□□ -1.73
DDX11Q96FC9 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
DDX11Q96FC9 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
DDX11Q96FC9 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
DDX11Q96FC9 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
DDX11Q96FC9 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.21□□□□□ -1.74
DDX11Q96FC9 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.21□□□□□ -1.74
DDX11Q96FC9 SNORD9-201ENST00000362566 104 ntBASIC4.21□□□□□ -1.74
DDX11Q96FC9 Y_RNA.151-201ENST00000363566 112 ntBASIC4.21□□□□□ -1.74
DDX11Q96FC9 SNORD73A-201ENST00000386062 65 ntBASIC4.21□□□□□ -1.74
DDX11Q96FC9 RNU6-882P-201ENST00000391025 103 ntBASIC4.21□□□□□ -1.74
DDX11Q96FC9 MTHFD2P2-201ENST00000407725 247 ntBASIC4.21□□□□□ -1.74
DDX11Q96FC9 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
DDX11Q96FC9 BX842559.1-201ENST00000419615 532 ntBASIC4.21□□□□□ -1.74
DDX11Q96FC9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.21□□□□□ -1.74
DDX11Q96FC9 AC097713.2-201ENST00000430199 356 ntBASIC4.21□□□□□ -1.74
DDX11Q96FC9 AC011816.1-201ENST00000441346 546 ntBASIC4.21□□□□□ -1.74
DDX11Q96FC9 AL121871.1-201ENST00000443413 436 ntBASIC4.21□□□□□ -1.74
DDX11Q96FC9 RPS29P31-201ENST00000446147 164 ntBASIC4.21□□□□□ -1.74
DDX11Q96FC9 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.21□□□□□ -1.74
DDX11Q96FC9 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.21□□□□□ -1.74
DDX11Q96FC9 HMGN2P7-201ENST00000456186 273 ntBASIC4.21□□□□□ -1.74
DDX11Q96FC9 RNU7-138P-201ENST00000459479 64 ntBASIC4.21□□□□□ -1.74
DDX11Q96FC9 RPL31P60-201ENST00000478450 367 ntBASIC4.21□□□□□ -1.74
DDX11Q96FC9 RPS4XP13-201ENST00000483219 789 ntBASIC4.21□□□□□ -1.74
DDX11Q96FC9 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.21□□□□□ -1.74
DDX11Q96FC9 MTND3P25-201ENST00000509243 135 ntBASIC4.21□□□□□ -1.74
DDX11Q96FC9 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.21□□□□□ -1.74
DDX11Q96FC9 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.21□□□□□ -1.74
DDX11Q96FC9 AC026470.2-201ENST00000561492 181 ntBASIC4.21□□□□□ -1.74
DDX11Q96FC9 MIR3690-201ENST00000580266 75 ntBASIC4.21□□□□□ -1.74
DDX11Q96FC9 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.21□□□□□ -1.74
DDX11Q96FC9 AL109918.3-201ENST00000603072 338 ntBASIC4.21□□□□□ -1.74
DDX11Q96FC9 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.21□□□□□ -1.74
DDX11Q96FC9 HMGB1P24-202ENST00000615653 685 ntBASIC4.21□□□□□ -1.74
DDX11Q96FC9 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
DDX11Q96FC9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.21□□□□□ -1.74
DDX11Q96FC9 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.21□□□□□ -1.74
DDX11Q96FC9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
DDX11Q96FC9 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.2□□□□□ -1.74
DDX11Q96FC9 AC010733.2-201ENST00000589496 5702 ntBASIC4.2□□□□□ -1.74
DDX11Q96FC9 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
DDX11Q96FC9 Y_RNA.106-201ENST00000363189 100 ntBASIC4.2□□□□□ -1.74
DDX11Q96FC9 RNU6-1074P-201ENST00000383995 104 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms