Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NUP43Q8NFH3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.9□□□□□ -1.79
NUP43Q8NFH3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NUP43Q8NFH3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NUP43Q8NFH3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.89□□□□□ -1.79
NUP43Q8NFH3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NUP43Q8NFH3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NUP43Q8NFH3 RNU6-1301P-201ENST00000362724 104 ntBASIC3.89□□□□□ -1.79
NUP43Q8NFH3 RNU6-105P-201ENST00000363909 104 ntBASIC3.89□□□□□ -1.79
NUP43Q8NFH3 Y_RNA.200-201ENST00000364018 102 ntBASIC3.89□□□□□ -1.79
NUP43Q8NFH3 Y_RNA.270-201ENST00000364693 104 ntBASIC3.89□□□□□ -1.79
NUP43Q8NFH3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NUP43Q8NFH3 SNORA37-201ENST00000384504 129 ntBASIC3.89□□□□□ -1.79
NUP43Q8NFH3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NUP43Q8NFH3 SNORA48.7-201ENST00000391302 135 ntBASIC3.89□□□□□ -1.79
NUP43Q8NFH3 RNU2-20P-201ENST00000410425 191 ntBASIC3.89□□□□□ -1.79
NUP43Q8NFH3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.89□□□□□ -1.79
NUP43Q8NFH3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.89□□□□□ -1.79
NUP43Q8NFH3 RPS6P12-201ENST00000432491 726 ntBASIC3.89□□□□□ -1.79
NUP43Q8NFH3 AC104332.1-201ENST00000440471 797 ntBASIC3.89□□□□□ -1.79
NUP43Q8NFH3 AL392103.1-201ENST00000447000 198 ntBASIC3.89□□□□□ -1.79
NUP43Q8NFH3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NUP43Q8NFH3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.89□□□□□ -1.79
NUP43Q8NFH3 RNA5SP291-201ENST00000517222 105 ntBASIC3.89□□□□□ -1.79
NUP43Q8NFH3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.89□□□□□ -1.79
NUP43Q8NFH3 AC022655.2-201ENST00000577280 318 ntBASIC3.89□□□□□ -1.79
NUP43Q8NFH3 MIR4643-201ENST00000577473 78 ntBASIC3.89□□□□□ -1.79
NUP43Q8NFH3 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.89□□□□□ -1.79
NUP43Q8NFH3 AC114781.5-201ENST00000615297 108 ntBASIC3.89□□□□□ -1.79
NUP43Q8NFH3 AC027309.3-201ENST00000623419 351 ntBASIC3.89□□□□□ -1.79
NUP43Q8NFH3 AC011944.2-201ENST00000624440 683 ntBASIC3.89□□□□□ -1.79
NUP43Q8NFH3 AC068724.3-201ENST00000625906 87 ntBASIC3.89□□□□□ -1.79
NUP43Q8NFH3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.89□□□□□ -1.79
NUP43Q8NFH3 AL133243.3-201ENST00000617415 3004 ntBASIC3.89□□□□□ -1.79
NUP43Q8NFH3 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.88□□□□□ -1.79
NUP43Q8NFH3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.88□□□□□ -1.79
NUP43Q8NFH3 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
NUP43Q8NFH3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
NUP43Q8NFH3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.88□□□□□ -1.79
NUP43Q8NFH3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NUP43Q8NFH3 AC087190.4-201ENST00000574616 8334 ntBASIC3.88□□□□□ -1.79
NUP43Q8NFH3 RNA5SP479-201ENST00000364858 117 ntBASIC3.88□□□□□ -1.79
NUP43Q8NFH3 RNA5SP366-201ENST00000365454 123 ntBASIC3.88□□□□□ -1.79
NUP43Q8NFH3 RNU6-937P-201ENST00000384325 106 ntBASIC3.88□□□□□ -1.79
NUP43Q8NFH3 RNU6-102P-201ENST00000384485 104 ntBASIC3.88□□□□□ -1.79
NUP43Q8NFH3 SNORA57.1-201ENST00000391227 145 ntBASIC3.88□□□□□ -1.79
NUP43Q8NFH3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.88□□□□□ -1.79
NUP43Q8NFH3 COX6B1P7-201ENST00000430845 235 ntBASIC3.88□□□□□ -1.79
NUP43Q8NFH3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.88□□□□□ -1.79
NUP43Q8NFH3 snoU13.4-201ENST00000458916 104 ntBASIC3.88□□□□□ -1.79
NUP43Q8NFH3 AC025554.1-201ENST00000505641 188 ntBASIC3.88□□□□□ -1.79
NUP43Q8NFH3 AC099522.1-202ENST00000514718 367 ntBASIC3.88□□□□□ -1.79
NUP43Q8NFH3 RNU6-496P-201ENST00000516145 99 ntBASIC3.88□□□□□ -1.79
NUP43Q8NFH3 SNORA31.8-201ENST00000516327 108 ntBASIC3.88□□□□□ -1.79
NUP43Q8NFH3 SCARNA24.2-201ENST00000516968 130 ntBASIC3.88□□□□□ -1.79
NUP43Q8NFH3 MRPS36P4-201ENST00000534436 298 ntBASIC3.88□□□□□ -1.79
NUP43Q8NFH3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.88□□□□□ -1.79
NUP43Q8NFH3 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.88□□□□□ -1.79
NUP43Q8NFH3 AC023824.2-201ENST00000566185 400 ntBASIC3.88□□□□□ -1.79
NUP43Q8NFH3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.88□□□□□ -1.79
NUP43Q8NFH3 MIR3160-1-201ENST00000577972 85 ntBASIC3.88□□□□□ -1.79
NUP43Q8NFH3 AC099506.2-201ENST00000623074 221 ntBASIC3.88□□□□□ -1.79
NUP43Q8NFH3 AC091903.1-201ENST00000624322 454 ntBASIC3.88□□□□□ -1.79
NUP43Q8NFH3 SCARNA4-202ENST00000625402 129 ntBASIC3.88□□□□□ -1.79
NUP43Q8NFH3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.88□□□□□ -1.79
NUP43Q8NFH3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
NUP43Q8NFH3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.88□□□□□ -1.79
NUP43Q8NFH3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.88□□□□□ -1.79
NUP43Q8NFH3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.88□□□□□ -1.79
NUP43Q8NFH3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NUP43Q8NFH3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
NUP43Q8NFH3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NUP43Q8NFH3 MIR448-201ENST00000362131 111 ntBASIC3.87□□□□□ -1.79
NUP43Q8NFH3 RNU6-222P-201ENST00000362438 107 ntBASIC3.87□□□□□ -1.79
NUP43Q8NFH3 SNORD113-8-201ENST00000363497 74 ntBASIC3.87□□□□□ -1.79
NUP43Q8NFH3 RNU4-9P-201ENST00000364951 139 ntBASIC3.87□□□□□ -1.79
NUP43Q8NFH3 SNORD78.2-201ENST00000391076 69 ntBASIC3.87□□□□□ -1.79
NUP43Q8NFH3 BTF3L4P2-201ENST00000392798 346 ntBASIC3.87□□□□□ -1.79
NUP43Q8NFH3 MIR1298-201ENST00000408783 112 ntBASIC3.87□□□□□ -1.79
NUP43Q8NFH3 Y_RNA.602-201ENST00000410535 92 ntBASIC3.87□□□□□ -1.79
NUP43Q8NFH3 RPL23AP26-201ENST00000412728 464 ntBASIC3.87□□□□□ -1.79
NUP43Q8NFH3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.87□□□□□ -1.79
NUP43Q8NFH3 FTH1P6-201ENST00000430768 320 ntBASIC3.87□□□□□ -1.79
NUP43Q8NFH3 AL591043.1-201ENST00000432461 424 ntBASIC3.87□□□□□ -1.79
NUP43Q8NFH3 SNRPEP9-201ENST00000436794 238 ntBASIC3.87□□□□□ -1.79
NUP43Q8NFH3 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.87□□□□□ -1.79
NUP43Q8NFH3 AL138752.1-201ENST00000452964 351 ntBASIC3.87□□□□□ -1.79
NUP43Q8NFH3 NUTF2P7-201ENST00000453086 375 ntBASIC3.87□□□□□ -1.79
NUP43Q8NFH3 snoU13.30-201ENST00000458951 104 ntBASIC3.87□□□□□ -1.79
NUP43Q8NFH3 MED28P2-201ENST00000475771 317 ntBASIC3.87□□□□□ -1.79
NUP43Q8NFH3 RPL21P129-201ENST00000491732 478 ntBASIC3.87□□□□□ -1.79
NUP43Q8NFH3 AC026784.1-201ENST00000507986 352 ntBASIC3.87□□□□□ -1.79
NUP43Q8NFH3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.87□□□□□ -1.79
NUP43Q8NFH3 AC022868.1-201ENST00000517767 391 ntBASIC3.87□□□□□ -1.79
NUP43Q8NFH3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.87□□□□□ -1.79
NUP43Q8NFH3 MIR4659A-201ENST00000580269 81 ntBASIC3.87□□□□□ -1.79
NUP43Q8NFH3 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.87□□□□□ -1.79
NUP43Q8NFH3 IPO5P1-202ENST00000600039 287 ntBASIC3.87□□□□□ -1.79
NUP43Q8NFH3 AC011476.5-201ENST00000615594 130 ntBASIC3.87□□□□□ -1.79
NUP43Q8NFH3 U2.14-201ENST00000615943 113 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms