Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RTL3Q8N8U3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.58□□□□□ -2
RTL3Q8N8U3 AL359854.1-201ENST00000614203 1594 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.58□□□□□ -2
RTL3Q8N8U3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.58□□□□□ -2
RTL3Q8N8U3 OR4G2P-201ENST00000328113 903 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 RNA5SP68-201ENST00000363885 119 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 RNU6-960P-201ENST00000364056 120 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 RNU6-74P-201ENST00000384235 107 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 MIR181A1-201ENST00000385026 110 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 RNU6-648P-201ENST00000410190 107 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.58□□□□□ -2
RTL3Q8N8U3 BX276092.3-201ENST00000424182 230 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 MED13P1-201ENST00000428342 171 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 GPR143P-201ENST00000434155 205 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 AL451074.3-201ENST00000437709 472 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 PSPHP1-201ENST00000450062 261 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.58□□□□□ -2
RTL3Q8N8U3 AC019235.1-201ENST00000503847 207 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.58□□□□□ -2
RTL3Q8N8U3 RN7SKP24-201ENST00000515888 284 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 RNA5SP112-201ENST00000515937 99 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 RNU6-581P-201ENST00000516214 105 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 FAM92A1P1-201ENST00000528023 890 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.58□□□□□ -2
RTL3Q8N8U3 AC010186.2-204ENST00000537668 439 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.58□□□□□ -2
RTL3Q8N8U3 ZNF519P2-201ENST00000557032 169 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.58□□□□□ -2
RTL3Q8N8U3 AC069294.1-201ENST00000608397 350 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 AC092954.2-201ENST00000609103 430 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 AC007684.1-201ENST00000609671 477 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 AC026585.1-201ENST00000619582 524 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 U4.3-201ENST00000621047 82 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 SCARNA15.3-201ENST00000626315 122 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 SCARNA4.1-201ENST00000628597 123 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 AC068137.3-201ENST00000639191 341 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 AC073869.6-201ENST00000640656 341 ntBASIC2.58□□□□□ -2
RTL3Q8N8U3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RTL3Q8N8U3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.58□□□□□ -2
RTL3Q8N8U3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
RTL3Q8N8U3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.57□□□□□ -2
RTL3Q8N8U3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.57□□□□□ -2
RTL3Q8N8U3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
RTL3Q8N8U3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
RTL3Q8N8U3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RTL3Q8N8U3 RNU6-486P-201ENST00000363116 107 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 RNA5SP456-201ENST00000364002 114 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 RNY1P12-201ENST00000364251 105 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 RNU6-1280P-201ENST00000365211 107 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 RNU6-946P-201ENST00000383878 107 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 MIR518C-201ENST00000384822 101 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 MTCO3P40-201ENST00000392516 676 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 CALM2P3-201ENST00000400429 449 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 RNU4-55P-201ENST00000410731 137 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 FCF1P9-201ENST00000412546 282 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 AC007560.1-201ENST00000426912 237 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.57□□□□□ -2
RTL3Q8N8U3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.57□□□□□ -2
RTL3Q8N8U3 TIMM9P3-201ENST00000428659 274 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.57□□□□□ -2
RTL3Q8N8U3 AC073464.1-201ENST00000429823 534 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.57□□□□□ -2
RTL3Q8N8U3 USP9YP28-201ENST00000435142 589 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 AC079781.2-201ENST00000446424 169 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 AC003071.1-201ENST00000451219 789 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 AC007182.2-201ENST00000489251 402 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 RPL22P13-201ENST00000493291 347 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.57□□□□□ -2
RTL3Q8N8U3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.57□□□□□ -2
RTL3Q8N8U3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.57□□□□□ -2
RTL3Q8N8U3 SNORD27.1-201ENST00000516319 72 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 RNA5SP148-201ENST00000516527 94 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.57□□□□□ -2
RTL3Q8N8U3 AC025755.1-201ENST00000521306 278 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.57□□□□□ -2
RTL3Q8N8U3 AP001893.2-201ENST00000526949 202 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 AP003034.1-201ENST00000534621 422 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.57□□□□□ -2
RTL3Q8N8U3 LINC00933-203ENST00000559812 219 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 MIR5571-201ENST00000577998 113 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.57□□□□□ -2
RTL3Q8N8U3 RPL12P50-201ENST00000603116 116 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 AF250324.2-201ENST00000608299 610 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 AC130324.3-201ENST00000614165 542 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 AC090517.2-201ENST00000614966 680 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 AL158209.2-201ENST00000619266 216 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 AC009161.2-201ENST00000624626 138 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 AC005609.4-201ENST00000625071 447 ntBASIC2.57□□□□□ -2
RTL3Q8N8U3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
RTL3Q8N8U3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RTL3Q8N8U3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.57□□□□□ -2
RTL3Q8N8U3 AL136360.1-201ENST00000503377 1900 ntBASIC2.56□□□□□ -2
RTL3Q8N8U3 Y_RNA.1-201ENST00000352915 104 ntBASIC2.56□□□□□ -2
RTL3Q8N8U3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.56□□□□□ -2
RTL3Q8N8U3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.56□□□□□ -2
RTL3Q8N8U3 AC002486.1-201ENST00000435098 391 ntBASIC2.56□□□□□ -2
RTL3Q8N8U3 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.56□□□□□ -2
RTL3Q8N8U3 RPS15AP9-201ENST00000439856 381 ntBASIC2.56□□□□□ -2
RTL3Q8N8U3 BTF3P15-201ENST00000455606 336 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms