Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.88□□□□□ -1.79
SYNE4Q8N205 MIR6128-201ENST00000615528 109 ntBASIC3.88□□□□□ -1.79
SYNE4Q8N205 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.88□□□□□ -1.79
SYNE4Q8N205 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.88□□□□□ -1.79
SYNE4Q8N205 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.88□□□□□ -1.79
SYNE4Q8N205 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
SYNE4Q8N205 EXOC5P1-201ENST00000510543 1969 ntBASIC3.88□□□□□ -1.79
SYNE4Q8N205 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.88□□□□□ -1.79
SYNE4Q8N205 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SYNE4Q8N205 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
SYNE4Q8N205 AC000403.1-201ENST00000613696 3585 ntBASIC3.88□□□□□ -1.79
SYNE4Q8N205 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.88□□□□□ -1.79
SYNE4Q8N205 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SYNE4Q8N205 ZNF826P-207ENST00000622273 1910 ntBASIC3.87□□□□□ -1.79
SYNE4Q8N205 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SYNE4Q8N205 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SYNE4Q8N205 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SYNE4Q8N205 HSPA8P1-201ENST00000425843 1833 ntBASIC3.87□□□□□ -1.79
SYNE4Q8N205 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.87□□□□□ -1.79
SYNE4Q8N205 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
SYNE4Q8N205 Y_RNA.47-201ENST00000362697 108 ntBASIC3.87□□□□□ -1.79
SYNE4Q8N205 RNU6-335P-201ENST00000364563 113 ntBASIC3.87□□□□□ -1.79
SYNE4Q8N205 SNORA75B-201ENST00000384053 137 ntBASIC3.87□□□□□ -1.79
SYNE4Q8N205 SNORD15B-201ENST00000384714 146 ntBASIC3.87□□□□□ -1.79
SYNE4Q8N205 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SYNE4Q8N205 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.87□□□□□ -1.79
SYNE4Q8N205 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.87□□□□□ -1.79
SYNE4Q8N205 CBX3P6-201ENST00000430257 527 ntBASIC3.87□□□□□ -1.79
SYNE4Q8N205 GSTA11P-201ENST00000452866 669 ntBASIC3.87□□□□□ -1.79
SYNE4Q8N205 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.87□□□□□ -1.79
SYNE4Q8N205 BTF3P15-201ENST00000455606 336 ntBASIC3.87□□□□□ -1.79
SYNE4Q8N205 Y_RNA.638-201ENST00000459374 113 ntBASIC3.87□□□□□ -1.79
SYNE4Q8N205 AC010631.1-201ENST00000474150 156 ntBASIC3.87□□□□□ -1.79
SYNE4Q8N205 AP001086.1-201ENST00000494882 321 ntBASIC3.87□□□□□ -1.79
SYNE4Q8N205 AC079140.5-201ENST00000507882 310 ntBASIC3.87□□□□□ -1.79
SYNE4Q8N205 AC097473.1-201ENST00000508142 408 ntBASIC3.87□□□□□ -1.79
SYNE4Q8N205 AC026782.1-201ENST00000512952 449 ntBASIC3.87□□□□□ -1.79
SYNE4Q8N205 RNU6-1016P-201ENST00000516689 94 ntBASIC3.87□□□□□ -1.79
SYNE4Q8N205 SCARNA20.6-201ENST00000517251 106 ntBASIC3.87□□□□□ -1.79
SYNE4Q8N205 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.87□□□□□ -1.79
SYNE4Q8N205 BNIP3P16-201ENST00000589779 534 ntBASIC3.87□□□□□ -1.79
SYNE4Q8N205 SNRPGP15-201ENST00000600149 222 ntBASIC3.87□□□□□ -1.79
SYNE4Q8N205 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.87□□□□□ -1.79
SYNE4Q8N205 AL162373.1-201ENST00000620433 407 ntBASIC3.87□□□□□ -1.79
SYNE4Q8N205 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.87□□□□□ -1.79
SYNE4Q8N205 MIR622-201ENST00000638396 96 ntBASIC3.87□□□□□ -1.79
SYNE4Q8N205 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SYNE4Q8N205 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SYNE4Q8N205 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
SYNE4Q8N205 HSPA8P4-201ENST00000511877 1920 ntBASIC3.87□□□□□ -1.79
SYNE4Q8N205 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SYNE4Q8N205 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SYNE4Q8N205 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SYNE4Q8N205 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
SYNE4Q8N205 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.86□□□□□ -1.79
SYNE4Q8N205 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
SYNE4Q8N205 AL136360.1-201ENST00000503377 1900 ntBASIC3.86□□□□□ -1.79
SYNE4Q8N205 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SYNE4Q8N205 Y_RNA.153-201ENST00000363615 91 ntBASIC3.86□□□□□ -1.79
SYNE4Q8N205 AP002088.1-201ENST00000382740 395 ntBASIC3.86□□□□□ -1.79
SYNE4Q8N205 Y_RNA.401-201ENST00000383965 117 ntBASIC3.86□□□□□ -1.79
SYNE4Q8N205 RNU6-1074P-201ENST00000383995 104 ntBASIC3.86□□□□□ -1.79
SYNE4Q8N205 Y_RNA.645-201ENST00000391229 102 ntBASIC3.86□□□□□ -1.79
SYNE4Q8N205 AL139039.1-201ENST00000401900 692 ntBASIC3.86□□□□□ -1.79
SYNE4Q8N205 PPP1R11P2-201ENST00000423543 382 ntBASIC3.86□□□□□ -1.79
SYNE4Q8N205 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.86□□□□□ -1.79
SYNE4Q8N205 AL139132.1-201ENST00000431587 344 ntBASIC3.86□□□□□ -1.79
SYNE4Q8N205 HMGB1P12-201ENST00000438594 598 ntBASIC3.86□□□□□ -1.79
SYNE4Q8N205 MTCO3P45-201ENST00000443036 613 ntBASIC3.86□□□□□ -1.79
SYNE4Q8N205 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.86□□□□□ -1.79
SYNE4Q8N205 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.86□□□□□ -1.79
SYNE4Q8N205 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.86□□□□□ -1.79
SYNE4Q8N205 HMGB1P22-201ENST00000505315 124 ntBASIC3.86□□□□□ -1.79
SYNE4Q8N205 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.86□□□□□ -1.79
SYNE4Q8N205 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SYNE4Q8N205 RN7SKP132-201ENST00000516001 208 ntBASIC3.86□□□□□ -1.79
SYNE4Q8N205 Y_RNA.661-201ENST00000516003 99 ntBASIC3.86□□□□□ -1.79
SYNE4Q8N205 RNU6-1069P-201ENST00000516612 133 ntBASIC3.86□□□□□ -1.79
SYNE4Q8N205 RNU6-1332P-201ENST00000516666 104 ntBASIC3.86□□□□□ -1.79
SYNE4Q8N205 SNORA31.20-201ENST00000517111 133 ntBASIC3.86□□□□□ -1.79
SYNE4Q8N205 HMGN1P28-201ENST00000521340 364 ntBASIC3.86□□□□□ -1.79
SYNE4Q8N205 TGIF1P1-201ENST00000558095 802 ntBASIC3.86□□□□□ -1.79
SYNE4Q8N205 AC004817.2-201ENST00000561794 651 ntBASIC3.86□□□□□ -1.79
SYNE4Q8N205 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.86□□□□□ -1.79
SYNE4Q8N205 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.86□□□□□ -1.79
SYNE4Q8N205 AC008162.1-201ENST00000604718 254 ntBASIC3.86□□□□□ -1.79
SYNE4Q8N205 AL670379.4-201ENST00000605279 254 ntBASIC3.86□□□□□ -1.79
SYNE4Q8N205 AC007619.2-201ENST00000605743 379 ntBASIC3.86□□□□□ -1.79
SYNE4Q8N205 AC009570.1-201ENST00000609599 745 ntBASIC3.86□□□□□ -1.79
SYNE4Q8N205 AC022418.1-201ENST00000624118 445 ntBASIC3.86□□□□□ -1.79
SYNE4Q8N205 AC091903.1-201ENST00000624322 454 ntBASIC3.86□□□□□ -1.79
SYNE4Q8N205 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.86□□□□□ -1.79
SYNE4Q8N205 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SYNE4Q8N205 DDX10P1-201ENST00000448545 1933 ntBASIC3.85□□□□□ -1.79
SYNE4Q8N205 AC103710.2-202ENST00000641454 2853 ntBASIC3.85□□□□□ -1.79
SYNE4Q8N205 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
SYNE4Q8N205 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SYNE4Q8N205 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SYNE4Q8N205 XIAPP3-201ENST00000312918 795 ntBASIC3.85□□□□□ -1.79
SYNE4Q8N205 RNU6-562P-201ENST00000362731 107 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms