Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC109329.1-201ENST00000518744 317 ntBASIC3.51□□□□□ -1.85
VRK3Q8IV63 AC074050.1-201ENST00000563247 211 ntBASIC3.51□□□□□ -1.85
VRK3Q8IV63 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.51□□□□□ -1.85
VRK3Q8IV63 MIR5701-3-201ENST00000578890 82 ntBASIC3.51□□□□□ -1.85
VRK3Q8IV63 MIR1254-2-201ENST00000579553 63 ntBASIC3.51□□□□□ -1.85
VRK3Q8IV63 MIR548AC-201ENST00000585049 88 ntBASIC3.51□□□□□ -1.85
VRK3Q8IV63 MIR5701-1-201ENST00000585138 82 ntBASIC3.51□□□□□ -1.85
VRK3Q8IV63 AC096772.1-201ENST00000609146 564 ntBASIC3.51□□□□□ -1.85
VRK3Q8IV63 AC034102.8-201ENST00000615146 484 ntBASIC3.51□□□□□ -1.85
VRK3Q8IV63 MIR5701-2-201ENST00000615634 82 ntBASIC3.51□□□□□ -1.85
VRK3Q8IV63 AL391261.4-201ENST00000616012 481 ntBASIC3.51□□□□□ -1.85
VRK3Q8IV63 AL353748.2-201ENST00000622148 471 ntBASIC3.51□□□□□ -1.85
VRK3Q8IV63 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.51□□□□□ -1.85
VRK3Q8IV63 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VRK3Q8IV63 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.51□□□□□ -1.85
VRK3Q8IV63 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
VRK3Q8IV63 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
VRK3Q8IV63 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VRK3Q8IV63 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VRK3Q8IV63 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
VRK3Q8IV63 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VRK3Q8IV63 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
VRK3Q8IV63 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
VRK3Q8IV63 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VRK3Q8IV63 RNY3P11-201ENST00000364153 102 ntBASIC3.5□□□□□ -1.85
VRK3Q8IV63 RNU4-50P-201ENST00000364361 141 ntBASIC3.5□□□□□ -1.85
VRK3Q8IV63 SNORA20.1-201ENST00000364790 130 ntBASIC3.5□□□□□ -1.85
VRK3Q8IV63 SNORA36C-201ENST00000384289 132 ntBASIC3.5□□□□□ -1.85
VRK3Q8IV63 RNU6-882P-201ENST00000391025 103 ntBASIC3.5□□□□□ -1.85
VRK3Q8IV63 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VRK3Q8IV63 AL591034.2-201ENST00000402839 359 ntBASIC3.5□□□□□ -1.85
VRK3Q8IV63 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.5□□□□□ -1.85
VRK3Q8IV63 AC063979.1-201ENST00000415539 377 ntBASIC3.5□□□□□ -1.85
VRK3Q8IV63 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.5□□□□□ -1.85
VRK3Q8IV63 AL121871.1-201ENST00000443413 436 ntBASIC3.5□□□□□ -1.85
VRK3Q8IV63 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VRK3Q8IV63 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.5□□□□□ -1.85
VRK3Q8IV63 AC087588.1-201ENST00000462203 316 ntBASIC3.5□□□□□ -1.85
VRK3Q8IV63 AC008716.1-201ENST00000511084 513 ntBASIC3.5□□□□□ -1.85
VRK3Q8IV63 APOOP4-201ENST00000513530 597 ntBASIC3.5□□□□□ -1.85
VRK3Q8IV63 RNU6-927P-201ENST00000516199 100 ntBASIC3.5□□□□□ -1.85
VRK3Q8IV63 RNU6-406P-201ENST00000516470 107 ntBASIC3.5□□□□□ -1.85
VRK3Q8IV63 RNU6-911P-201ENST00000516523 104 ntBASIC3.5□□□□□ -1.85
VRK3Q8IV63 RNU6-897P-201ENST00000517135 105 ntBASIC3.5□□□□□ -1.85
VRK3Q8IV63 TRAV32-201ENST00000553993 340 ntBASIC3.5□□□□□ -1.85
VRK3Q8IV63 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.5□□□□□ -1.85
VRK3Q8IV63 AC090517.1-201ENST00000569307 266 ntBASIC3.5□□□□□ -1.85
VRK3Q8IV63 AC006600.1-201ENST00000572529 153 ntBASIC3.5□□□□□ -1.85
VRK3Q8IV63 AC005951.2-201ENST00000576282 495 ntBASIC3.5□□□□□ -1.85
VRK3Q8IV63 MIR4273-201ENST00000582824 84 ntBASIC3.5□□□□□ -1.85
VRK3Q8IV63 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.5□□□□□ -1.85
VRK3Q8IV63 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.5□□□□□ -1.85
VRK3Q8IV63 AL159153.1-201ENST00000619688 317 ntBASIC3.5□□□□□ -1.85
VRK3Q8IV63 U4.6-201ENST00000621618 127 ntBASIC3.5□□□□□ -1.85
VRK3Q8IV63 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.5□□□□□ -1.85
VRK3Q8IV63 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.5□□□□□ -1.85
VRK3Q8IV63 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.5□□□□□ -1.85
VRK3Q8IV63 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.5□□□□□ -1.85
VRK3Q8IV63 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.5□□□□□ -1.85
VRK3Q8IV63 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VRK3Q8IV63 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.5□□□□□ -1.85
VRK3Q8IV63 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VRK3Q8IV63 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VRK3Q8IV63 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.49□□□□□ -1.85
VRK3Q8IV63 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
VRK3Q8IV63 Y_RNA.19-201ENST00000362462 99 ntBASIC3.49□□□□□ -1.85
VRK3Q8IV63 RNU6-200P-201ENST00000364743 107 ntBASIC3.49□□□□□ -1.85
VRK3Q8IV63 Y_RNA.324-201ENST00000365165 102 ntBASIC3.49□□□□□ -1.85
VRK3Q8IV63 U8.8-201ENST00000365399 135 ntBASIC3.49□□□□□ -1.85
VRK3Q8IV63 RNU6-611P-201ENST00000384276 104 ntBASIC3.49□□□□□ -1.85
VRK3Q8IV63 Y_RNA.515-201ENST00000384535 112 ntBASIC3.49□□□□□ -1.85
VRK3Q8IV63 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VRK3Q8IV63 RN7SKP177-201ENST00000410567 355 ntBASIC3.49□□□□□ -1.85
VRK3Q8IV63 RN7SKP27-201ENST00000410684 333 ntBASIC3.49□□□□□ -1.85
VRK3Q8IV63 RNU6-325P-201ENST00000411132 105 ntBASIC3.49□□□□□ -1.85
VRK3Q8IV63 RPS15AP6-201ENST00000420703 385 ntBASIC3.49□□□□□ -1.85
VRK3Q8IV63 AL590135.1-201ENST00000422215 156 ntBASIC3.49□□□□□ -1.85
VRK3Q8IV63 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.49□□□□□ -1.85
VRK3Q8IV63 RPL29P29-201ENST00000448725 423 ntBASIC3.49□□□□□ -1.85
VRK3Q8IV63 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.49□□□□□ -1.85
VRK3Q8IV63 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.49□□□□□ -1.85
VRK3Q8IV63 SUMO2P6-201ENST00000505273 288 ntBASIC3.49□□□□□ -1.85
VRK3Q8IV63 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.49□□□□□ -1.85
VRK3Q8IV63 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.49□□□□□ -1.85
VRK3Q8IV63 ACA59.1-201ENST00000515966 143 ntBASIC3.49□□□□□ -1.85
VRK3Q8IV63 Y_RNA.687-201ENST00000516558 91 ntBASIC3.49□□□□□ -1.85
VRK3Q8IV63 AC144568.1-201ENST00000520139 137 ntBASIC3.49□□□□□ -1.85
VRK3Q8IV63 AP006245.1-201ENST00000522549 120 ntBASIC3.49□□□□□ -1.85
VRK3Q8IV63 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.49□□□□□ -1.85
VRK3Q8IV63 HSPE1P20-201ENST00000538133 289 ntBASIC3.49□□□□□ -1.85
VRK3Q8IV63 AC126177.3-201ENST00000551839 688 ntBASIC3.49□□□□□ -1.85
VRK3Q8IV63 AL161713.1-201ENST00000555538 145 ntBASIC3.49□□□□□ -1.85
VRK3Q8IV63 MIR4458-201ENST00000578872 75 ntBASIC3.49□□□□□ -1.85
VRK3Q8IV63 AL158827.2-201ENST00000602494 330 ntBASIC3.49□□□□□ -1.85
VRK3Q8IV63 AL121917.1-203ENST00000605534 577 ntBASIC3.49□□□□□ -1.85
VRK3Q8IV63 AL691447.3-201ENST00000635020 330 ntBASIC3.49□□□□□ -1.85
VRK3Q8IV63 AL034408.1-202ENST00000636088 415 ntBASIC3.49□□□□□ -1.85
VRK3Q8IV63 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.49□□□□□ -1.85
VRK3Q8IV63 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.49□□□□□ -1.85
VRK3Q8IV63 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 159.8 ms