Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 RNA5SP502-201ENST00000362694 119 ntBASIC4.55□□□□□ -1.68
USP48Q86UV5 RNU6-505P-201ENST00000384427 107 ntBASIC4.55□□□□□ -1.68
USP48Q86UV5 RNU6-790P-201ENST00000384479 105 ntBASIC4.55□□□□□ -1.68
USP48Q86UV5 HSPE1P26-201ENST00000405341 275 ntBASIC4.55□□□□□ -1.68
USP48Q86UV5 TMEM167AP1-201ENST00000423409 219 ntBASIC4.55□□□□□ -1.68
USP48Q86UV5 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.55□□□□□ -1.68
USP48Q86UV5 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.55□□□□□ -1.68
USP48Q86UV5 AC083863.1-201ENST00000438811 231 ntBASIC4.55□□□□□ -1.68
USP48Q86UV5 DAP3P1-201ENST00000441522 278 ntBASIC4.55□□□□□ -1.68
USP48Q86UV5 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.55□□□□□ -1.68
USP48Q86UV5 AL031274.1-201ENST00000450334 232 ntBASIC4.55□□□□□ -1.68
USP48Q86UV5 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.55□□□□□ -1.68
USP48Q86UV5 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.55□□□□□ -1.68
USP48Q86UV5 AC113155.1-201ENST00000511141 769 ntBASIC4.55□□□□□ -1.68
USP48Q86UV5 RPL23AP94-201ENST00000512518 302 ntBASIC4.55□□□□□ -1.68
USP48Q86UV5 MTCO2P24-201ENST00000515611 426 ntBASIC4.55□□□□□ -1.68
USP48Q86UV5 RNA5SP164-201ENST00000516533 110 ntBASIC4.55□□□□□ -1.68
USP48Q86UV5 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.55□□□□□ -1.68
USP48Q86UV5 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.55□□□□□ -1.68
USP48Q86UV5 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.55□□□□□ -1.68
USP48Q86UV5 MIR3149-201ENST00000584629 83 ntBASIC4.55□□□□□ -1.68
USP48Q86UV5 AL355598.1-201ENST00000604169 202 ntBASIC4.55□□□□□ -1.68
USP48Q86UV5 FTX_3.1-201ENST00000610451 147 ntBASIC4.55□□□□□ -1.68
USP48Q86UV5 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
USP48Q86UV5 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.55□□□□□ -1.68
USP48Q86UV5 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.55□□□□□ -1.68
USP48Q86UV5 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.55□□□□□ -1.68
USP48Q86UV5 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
USP48Q86UV5 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
USP48Q86UV5 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.55□□□□□ -1.68
USP48Q86UV5 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
USP48Q86UV5 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
USP48Q86UV5 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
USP48Q86UV5 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
USP48Q86UV5 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
USP48Q86UV5 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
USP48Q86UV5 Y_RNA.452-201ENST00000384202 108 ntBASIC4.54□□□□□ -1.68
USP48Q86UV5 Y_RNA.463-201ENST00000384271 102 ntBASIC4.54□□□□□ -1.68
USP48Q86UV5 RNU6-933P-201ENST00000384424 107 ntBASIC4.54□□□□□ -1.68
USP48Q86UV5 MRPL42P3-201ENST00000401492 326 ntBASIC4.54□□□□□ -1.68
USP48Q86UV5 RPL23AP48-201ENST00000406913 488 ntBASIC4.54□□□□□ -1.68
USP48Q86UV5 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.54□□□□□ -1.68
USP48Q86UV5 HMGB3P2-201ENST00000411913 584 ntBASIC4.54□□□□□ -1.68
USP48Q86UV5 ATP5A1P2-201ENST00000412323 255 ntBASIC4.54□□□□□ -1.68
USP48Q86UV5 SNORD56-201ENST00000413522 71 ntBASIC4.54□□□□□ -1.68
USP48Q86UV5 AC114482.1-201ENST00000418010 247 ntBASIC4.54□□□□□ -1.68
USP48Q86UV5 AC093151.1-201ENST00000427711 313 ntBASIC4.54□□□□□ -1.68
USP48Q86UV5 RPS15AP10-201ENST00000432472 382 ntBASIC4.54□□□□□ -1.68
USP48Q86UV5 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.54□□□□□ -1.68
USP48Q86UV5 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.54□□□□□ -1.68
USP48Q86UV5 FTH1P25-201ENST00000447665 469 ntBASIC4.54□□□□□ -1.68
USP48Q86UV5 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.54□□□□□ -1.68
USP48Q86UV5 RNU6-1037P-201ENST00000459571 107 ntBASIC4.54□□□□□ -1.68
USP48Q86UV5 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.54□□□□□ -1.68
USP48Q86UV5 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.54□□□□□ -1.68
USP48Q86UV5 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.54□□□□□ -1.68
USP48Q86UV5 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
USP48Q86UV5 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.54□□□□□ -1.68
USP48Q86UV5 TRAV32-201ENST00000553993 340 ntBASIC4.54□□□□□ -1.68
USP48Q86UV5 AC109446.1-201ENST00000566172 220 ntBASIC4.54□□□□□ -1.68
USP48Q86UV5 AC008121.1-201ENST00000603244 268 ntBASIC4.54□□□□□ -1.68
USP48Q86UV5 AL121917.1-203ENST00000605534 577 ntBASIC4.54□□□□□ -1.68
USP48Q86UV5 AC005014.2-201ENST00000607795 599 ntBASIC4.54□□□□□ -1.68
USP48Q86UV5 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.54□□□□□ -1.68
USP48Q86UV5 AC027309.3-201ENST00000623419 351 ntBASIC4.54□□□□□ -1.68
USP48Q86UV5 U6.99-201ENST00000637524 83 ntBASIC4.54□□□□□ -1.68
USP48Q86UV5 AL732372.2-225ENST00000642124 456 ntBASIC4.54□□□□□ -1.68
USP48Q86UV5 MFSD8-236ENST00000641509 4050 ntBASIC4.54□□□□□ -1.68
USP48Q86UV5 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
USP48Q86UV5 AL049781.1-201ENST00000623195 3585 ntBASIC4.54□□□□□ -1.68
USP48Q86UV5 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
USP48Q86UV5 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
USP48Q86UV5 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.53□□□□□ -1.68
USP48Q86UV5 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
USP48Q86UV5 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
USP48Q86UV5 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
USP48Q86UV5 RNU6-1059P-201ENST00000363752 98 ntBASIC4.53□□□□□ -1.68
USP48Q86UV5 RNU6-26P-201ENST00000383985 107 ntBASIC4.53□□□□□ -1.68
USP48Q86UV5 Y_RNA.496-201ENST00000384444 101 ntBASIC4.53□□□□□ -1.68
USP48Q86UV5 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.53□□□□□ -1.68
USP48Q86UV5 RNU6-325P-201ENST00000411132 105 ntBASIC4.53□□□□□ -1.68
USP48Q86UV5 AL133396.1-201ENST00000432048 687 ntBASIC4.53□□□□□ -1.68
USP48Q86UV5 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.53□□□□□ -1.68
USP48Q86UV5 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.53□□□□□ -1.68
USP48Q86UV5 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.53□□□□□ -1.68
USP48Q86UV5 RPL12P25-201ENST00000455592 494 ntBASIC4.53□□□□□ -1.68
USP48Q86UV5 AC008571.1-201ENST00000467232 300 ntBASIC4.53□□□□□ -1.68
USP48Q86UV5 AC090877.1-201ENST00000561418 344 ntBASIC4.53□□□□□ -1.68
USP48Q86UV5 MIR4782-201ENST00000577987 79 ntBASIC4.53□□□□□ -1.68
USP48Q86UV5 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.53□□□□□ -1.68
USP48Q86UV5 7SK.7-201ENST00000603504 247 ntBASIC4.53□□□□□ -1.68
USP48Q86UV5 AC083806.3-201ENST00000614016 455 ntBASIC4.53□□□□□ -1.68
USP48Q86UV5 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.53□□□□□ -1.68
USP48Q86UV5 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.53□□□□□ -1.68
USP48Q86UV5 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.53□□□□□ -1.68
USP48Q86UV5 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
USP48Q86UV5 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.53□□□□□ -1.68
USP48Q86UV5 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.52□□□□□ -1.69
USP48Q86UV5 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.52□□□□□ -1.69
USP48Q86UV5 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms