Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC139453.3-201ENST00000493276 369 ntBASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 VWA8P1-201ENST00000510889 176 ntBASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 AC010265.1-201ENST00000513509 211 ntBASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 PARP1P2-201ENST00000556806 195 ntBASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 AL670379.2-201ENST00000604983 252 ntBASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 AL357075.2-201ENST00000614906 189 ntBASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 AC083809.1-201ENST00000615051 472 ntBASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 MIR6129-201ENST00000616087 109 ntBASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 AC092628.2-201ENST00000622492 339 ntBASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 AC010329.2-201ENST00000595195 2737 ntBASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 RNA5SP197-201ENST00000363357 119 ntBASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 HLFP1-201ENST00000402375 499 ntBASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 AL390729.2-201ENST00000416137 156 ntBASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 BTF3P11-201ENST00000426582 477 ntBASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 RPL23AP24-201ENST00000458203 385 ntBASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 RPL21P13-201ENST00000488305 481 ntBASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 AC091874.1-201ENST00000511402 339 ntBASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 RNU6-659P-201ENST00000516454 104 ntBASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 AL020997.2-201ENST00000602607 184 ntBASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 AL645944.1-201ENST00000603857 493 ntBASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 Y_RNA.802-201ENST00000614892 130 ntBASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 AC026951.1-201ENST00000559530 2459 ntBASIC4.77□□□□□ -1.65
FOXR1Q6PIV2 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 FTLP6-201ENST00000355274 422 ntBASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 RNU6-834P-201ENST00000362367 110 ntBASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 RNA5SP502-201ENST00000362694 119 ntBASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 SNORD115-32-201ENST00000364079 82 ntBASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 Y_RNA.420-201ENST00000384043 110 ntBASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 SNORA11-201ENST00000408789 128 ntBASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 AL049874.1-201ENST00000489560 388 ntBASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 AC110491.1-201ENST00000562191 2010 ntBASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 AC005176.2-201ENST00000596933 147 ntBASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 AL391358.1-201ENST00000605342 190 ntBASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 AC092593.1-201ENST00000515413 1815 ntBASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 AC009812.4-201ENST00000569134 1805 ntBASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
FOXR1Q6PIV2 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 MTND5P32-201ENST00000560711 1802 ntBASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 Y_RNA.121-201ENST00000363309 113 ntBASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 Y_RNA.230-201ENST00000364348 109 ntBASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 RNU6-275P-201ENST00000364910 107 ntBASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 RNU5E-7P-201ENST00000365290 117 ntBASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 RNU6-1145P-201ENST00000384246 107 ntBASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 MIR153-2-201ENST00000385225 87 ntBASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 AL357515.1-201ENST00000402967 542 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms