Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 Y_RNA.689-201ENST00000516589 107 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 RNU2-46P-201ENST00000517038 113 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.18□□□□□ -2.06
ATL3Q6DD88 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.18□□□□□ -2.06
ATL3Q6DD88 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.18□□□□□ -2.06
ATL3Q6DD88 AL121821.2-201ENST00000556081 394 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.18□□□□□ -2.06
ATL3Q6DD88 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.18□□□□□ -2.06
ATL3Q6DD88 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.18□□□□□ -2.06
ATL3Q6DD88 MIR1273C-201ENST00000578669 77 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 AC009977.1-201ENST00000586015 570 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 NRBF2P1-201ENST00000587407 859 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.18□□□□□ -2.06
ATL3Q6DD88 MIR15A-201ENST00000607334 83 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 MIR6715A-201ENST00000615929 79 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 AC098657.3-201ENST00000620434 263 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 AL603839.4-201ENST00000624658 1005 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ATL3Q6DD88 CDC27P3-201ENST00000635418 1910 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 AL359851.1-201ENST00000569460 4997 ntBASIC2.18□□□□□ -2.06
ATL3Q6DD88 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
ATL3Q6DD88 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ATL3Q6DD88 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.17□□□□□ -2.06
ATL3Q6DD88 RNU6-39P-201ENST00000384344 107 ntBASIC2.17□□□□□ -2.06
ATL3Q6DD88 MIR17-201ENST00000385012 84 ntBASIC2.17□□□□□ -2.06
ATL3Q6DD88 MIR301A-201ENST00000385261 86 ntBASIC2.17□□□□□ -2.06
ATL3Q6DD88 SNORA40C-201ENST00000391285 128 ntBASIC2.17□□□□□ -2.06
ATL3Q6DD88 RNU2-40P-201ENST00000410833 196 ntBASIC2.17□□□□□ -2.06
ATL3Q6DD88 EIF1AXP1-201ENST00000419267 435 ntBASIC2.17□□□□□ -2.06
ATL3Q6DD88 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.17□□□□□ -2.06
ATL3Q6DD88 CYCSP46-201ENST00000423569 204 ntBASIC2.17□□□□□ -2.06
ATL3Q6DD88 AC007283.2-201ENST00000424739 197 ntBASIC2.17□□□□□ -2.06
ATL3Q6DD88 AL591212.2-201ENST00000433923 257 ntBASIC2.17□□□□□ -2.06
ATL3Q6DD88 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.17□□□□□ -2.06
ATL3Q6DD88 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.17□□□□□ -2.06
ATL3Q6DD88 AC093899.1-201ENST00000457984 376 ntBASIC2.17□□□□□ -2.06
ATL3Q6DD88 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.17□□□□□ -2.06
ATL3Q6DD88 AC117503.1-201ENST00000472241 394 ntBASIC2.17□□□□□ -2.06
ATL3Q6DD88 AC018437.1-201ENST00000492214 406 ntBASIC2.17□□□□□ -2.06
ATL3Q6DD88 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.17□□□□□ -2.06
ATL3Q6DD88 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.17□□□□□ -2.06
ATL3Q6DD88 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.17□□□□□ -2.06
ATL3Q6DD88 AC007375.1-201ENST00000554513 578 ntBASIC2.17□□□□□ -2.06
ATL3Q6DD88 LINC00933-203ENST00000559812 219 ntBASIC2.17□□□□□ -2.06
ATL3Q6DD88 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.17□□□□□ -2.06
ATL3Q6DD88 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.17□□□□□ -2.06
ATL3Q6DD88 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.17□□□□□ -2.06
ATL3Q6DD88 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.17□□□□□ -2.06
ATL3Q6DD88 AC063944.3-201ENST00000609969 533 ntBASIC2.17□□□□□ -2.06
ATL3Q6DD88 AL161423.1-201ENST00000613700 262 ntBASIC2.17□□□□□ -2.06
ATL3Q6DD88 AL590808.1-201ENST00000618696 141 ntBASIC2.17□□□□□ -2.06
ATL3Q6DD88 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.17□□□□□ -2.06
ATL3Q6DD88 IGHVIII-44-202ENST00000636235 289 ntBASIC2.17□□□□□ -2.06
ATL3Q6DD88 HSPA8P4-201ENST00000511877 1920 ntBASIC2.17□□□□□ -2.06
ATL3Q6DD88 KPNA2P1-201ENST00000458289 1591 ntBASIC2.16□□□□□ -2.06
ATL3Q6DD88 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
ATL3Q6DD88 RNU4-21P-201ENST00000362802 126 ntBASIC2.16□□□□□ -2.06
ATL3Q6DD88 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.16□□□□□ -2.06
ATL3Q6DD88 SNORA75B-201ENST00000384053 137 ntBASIC2.16□□□□□ -2.06
ATL3Q6DD88 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.16□□□□□ -2.06
ATL3Q6DD88 RPL23AP32-201ENST00000395315 459 ntBASIC2.16□□□□□ -2.06
ATL3Q6DD88 MIR1302-8-201ENST00000408342 128 ntBASIC2.16□□□□□ -2.06
ATL3Q6DD88 Y_RNA.598-201ENST00000410480 95 ntBASIC2.16□□□□□ -2.06
ATL3Q6DD88 RN7SKP223-201ENST00000410582 62 ntBASIC2.16□□□□□ -2.06
ATL3Q6DD88 Z98742.3-201ENST00000418637 326 ntBASIC2.16□□□□□ -2.06
ATL3Q6DD88 AL109913.1-201ENST00000421173 514 ntBASIC2.16□□□□□ -2.06
ATL3Q6DD88 AC137499.1-201ENST00000427602 88 ntBASIC2.16□□□□□ -2.06
ATL3Q6DD88 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.16□□□□□ -2.06
ATL3Q6DD88 MTND1P30-201ENST00000441241 901 ntBASIC2.16□□□□□ -2.06
ATL3Q6DD88 AC124916.1-201ENST00000444020 547 ntBASIC2.16□□□□□ -2.06
ATL3Q6DD88 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.16□□□□□ -2.06
ATL3Q6DD88 AC022493.1-201ENST00000492984 337 ntBASIC2.16□□□□□ -2.06
ATL3Q6DD88 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.16□□□□□ -2.06
ATL3Q6DD88 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.16□□□□□ -2.06
ATL3Q6DD88 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.16□□□□□ -2.06
ATL3Q6DD88 RNU6-581P-201ENST00000516214 105 ntBASIC2.16□□□□□ -2.06
ATL3Q6DD88 RNU7-51P-201ENST00000516560 62 ntBASIC2.16□□□□□ -2.06
ATL3Q6DD88 RNU6-677P-201ENST00000516914 101 ntBASIC2.16□□□□□ -2.06
ATL3Q6DD88 RNU6-1315P-201ENST00000517187 99 ntBASIC2.16□□□□□ -2.06
ATL3Q6DD88 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.16□□□□□ -2.06
ATL3Q6DD88 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.16□□□□□ -2.06
ATL3Q6DD88 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.16□□□□□ -2.06
ATL3Q6DD88 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ATL3Q6DD88 MIR548AB-201ENST00000584917 84 ntBASIC2.16□□□□□ -2.06
ATL3Q6DD88 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
ATL3Q6DD88 AF246928.1-201ENST00000623768 87 ntBASIC2.16□□□□□ -2.06
ATL3Q6DD88 AL512643.1-201ENST00000635735 524 ntBASIC2.16□□□□□ -2.06
ATL3Q6DD88 AC073343.1-201ENST00000328239 651 ntBASIC2.15□□□□□ -2.07
ATL3Q6DD88 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
ATL3Q6DD88 MIR449A-201ENST00000362113 91 ntBASIC2.15□□□□□ -2.07
ATL3Q6DD88 U8.3-201ENST00000363321 132 ntBASIC2.15□□□□□ -2.07
ATL3Q6DD88 RNU6-166P-201ENST00000384371 107 ntBASIC2.15□□□□□ -2.07
ATL3Q6DD88 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.15□□□□□ -2.07
ATL3Q6DD88 AL356379.1-201ENST00000414105 126 ntBASIC2.15□□□□□ -2.07
ATL3Q6DD88 AL031779.1-201ENST00000415663 330 ntBASIC2.15□□□□□ -2.07
ATL3Q6DD88 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.15□□□□□ -2.07
ATL3Q6DD88 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.15□□□□□ -2.07
ATL3Q6DD88 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.15□□□□□ -2.07
ATL3Q6DD88 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
ATL3Q6DD88 MTND6P13-201ENST00000443510 523 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms