Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
E4F1Q66K89 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
E4F1Q66K89 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
E4F1Q66K89 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
E4F1Q66K89 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
E4F1Q66K89 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
E4F1Q66K89 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
E4F1Q66K89 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
E4F1Q66K89 MTND5P9-201ENST00000503854 1755 ntBASIC4.02□□□□□ -1.77
E4F1Q66K89 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
E4F1Q66K89 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
E4F1Q66K89 MIR30E-201ENST00000362104 92 ntBASIC4.02□□□□□ -1.77
E4F1Q66K89 Y_RNA.106-201ENST00000363189 100 ntBASIC4.02□□□□□ -1.77
E4F1Q66K89 Y_RNA.210-201ENST00000364161 110 ntBASIC4.02□□□□□ -1.77
E4F1Q66K89 RNA5SP189-201ENST00000364920 115 ntBASIC4.02□□□□□ -1.77
E4F1Q66K89 RNU5E-7P-201ENST00000365290 117 ntBASIC4.02□□□□□ -1.77
E4F1Q66K89 RNU6-140P-201ENST00000384566 108 ntBASIC4.02□□□□□ -1.77
E4F1Q66K89 RNU6-1197P-201ENST00000391183 107 ntBASIC4.02□□□□□ -1.77
E4F1Q66K89 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
E4F1Q66K89 AC006989.1-201ENST00000427212 131 ntBASIC4.02□□□□□ -1.77
E4F1Q66K89 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.02□□□□□ -1.77
E4F1Q66K89 CBX3P6-201ENST00000430257 527 ntBASIC4.02□□□□□ -1.77
E4F1Q66K89 AL159987.2-201ENST00000432754 307 ntBASIC4.02□□□□□ -1.77
E4F1Q66K89 AC108059.2-201ENST00000434626 151 ntBASIC4.02□□□□□ -1.77
E4F1Q66K89 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.02□□□□□ -1.77
E4F1Q66K89 RPL21P2-201ENST00000440049 481 ntBASIC4.02□□□□□ -1.77
E4F1Q66K89 RPS3AP46-201ENST00000448352 682 ntBASIC4.02□□□□□ -1.77
E4F1Q66K89 HMGB3P8-201ENST00000449709 577 ntBASIC4.02□□□□□ -1.77
E4F1Q66K89 AC010401.1-201ENST00000463867 348 ntBASIC4.02□□□□□ -1.77
E4F1Q66K89 AP000873.1-201ENST00000463987 400 ntBASIC4.02□□□□□ -1.77
E4F1Q66K89 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.02□□□□□ -1.77
E4F1Q66K89 RNU6-377P-201ENST00000515965 102 ntBASIC4.02□□□□□ -1.77
E4F1Q66K89 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.02□□□□□ -1.77
E4F1Q66K89 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.02□□□□□ -1.77
E4F1Q66K89 AC016727.2-201ENST00000603988 621 ntBASIC4.02□□□□□ -1.77
E4F1Q66K89 AL355297.3-201ENST00000604082 446 ntBASIC4.02□□□□□ -1.77
E4F1Q66K89 MIR8076-201ENST00000611401 83 ntBASIC4.02□□□□□ -1.77
E4F1Q66K89 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.02□□□□□ -1.77
E4F1Q66K89 MIR6830-201ENST00000636015 70 ntBASIC4.02□□□□□ -1.77
E4F1Q66K89 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.02□□□□□ -1.77
E4F1Q66K89 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
E4F1Q66K89 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.02□□□□□ -1.77
E4F1Q66K89 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
E4F1Q66K89 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
E4F1Q66K89 ZNF299P-201ENST00000406845 1804 ntBASIC4.02□□□□□ -1.77
E4F1Q66K89 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
E4F1Q66K89 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.02□□□□□ -1.77
E4F1Q66K89 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
E4F1Q66K89 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
E4F1Q66K89 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
E4F1Q66K89 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
E4F1Q66K89 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.01□□□□□ -1.77
E4F1Q66K89 RNU6-50P-201ENST00000362356 103 ntBASIC4.01□□□□□ -1.77
E4F1Q66K89 Y_RNA.380-201ENST00000365663 111 ntBASIC4.01□□□□□ -1.77
E4F1Q66K89 AC068538.1-201ENST00000376856 336 ntBASIC4.01□□□□□ -1.77
E4F1Q66K89 RNU6-1109P-201ENST00000391187 107 ntBASIC4.01□□□□□ -1.77
E4F1Q66K89 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.01□□□□□ -1.77
E4F1Q66K89 U3.42-201ENST00000408746 214 ntBASIC4.01□□□□□ -1.77
E4F1Q66K89 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.01□□□□□ -1.77
E4F1Q66K89 AL512844.2-201ENST00000433990 593 ntBASIC4.01□□□□□ -1.77
E4F1Q66K89 RPS3AP12-201ENST00000443616 753 ntBASIC4.01□□□□□ -1.77
E4F1Q66K89 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.01□□□□□ -1.77
E4F1Q66K89 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.01□□□□□ -1.77
E4F1Q66K89 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.01□□□□□ -1.77
E4F1Q66K89 RPL23AP14-201ENST00000468281 468 ntBASIC4.01□□□□□ -1.77
E4F1Q66K89 AC084357.1-201ENST00000473404 255 ntBASIC4.01□□□□□ -1.77
E4F1Q66K89 RPL31P13-201ENST00000484151 370 ntBASIC4.01□□□□□ -1.77
E4F1Q66K89 RPL22P13-201ENST00000493291 347 ntBASIC4.01□□□□□ -1.77
E4F1Q66K89 AC005921.1-201ENST00000510589 286 ntBASIC4.01□□□□□ -1.77
E4F1Q66K89 RNU6-612P-201ENST00000516909 102 ntBASIC4.01□□□□□ -1.77
E4F1Q66K89 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.01□□□□□ -1.77
E4F1Q66K89 AC040926.1-201ENST00000530195 238 ntBASIC4.01□□□□□ -1.77
E4F1Q66K89 TGIF1P1-201ENST00000558095 802 ntBASIC4.01□□□□□ -1.77
E4F1Q66K89 MIR4782-201ENST00000577987 79 ntBASIC4.01□□□□□ -1.77
E4F1Q66K89 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.01□□□□□ -1.77
E4F1Q66K89 Z98751.3-201ENST00000604447 521 ntBASIC4.01□□□□□ -1.77
E4F1Q66K89 AC004825.2-201ENST00000616634 455 ntBASIC4.01□□□□□ -1.77
E4F1Q66K89 AC112484.5-201ENST00000624189 228 ntBASIC4.01□□□□□ -1.77
E4F1Q66K89 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.01□□□□□ -1.77
E4F1Q66K89 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4□□□□□ -1.77
E4F1Q66K89 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
E4F1Q66K89 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4□□□□□ -1.77
E4F1Q66K89 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
E4F1Q66K89 Y_RNA.188-201ENST00000363952 111 ntBASIC4□□□□□ -1.77
E4F1Q66K89 RNU6-1318P-201ENST00000365389 103 ntBASIC4□□□□□ -1.77
E4F1Q66K89 SNORA70C-201ENST00000384538 135 ntBASIC4□□□□□ -1.77
E4F1Q66K89 RNU6-1222P-201ENST00000384615 107 ntBASIC4□□□□□ -1.77
E4F1Q66K89 RNU6-700P-201ENST00000391043 107 ntBASIC4□□□□□ -1.77
E4F1Q66K89 RNA5SP129-201ENST00000410276 118 ntBASIC4□□□□□ -1.77
E4F1Q66K89 AC007098.1-201ENST00000420122 367 ntBASIC4□□□□□ -1.77
E4F1Q66K89 AL117339.2-201ENST00000430475 180 ntBASIC4□□□□□ -1.77
E4F1Q66K89 AL162151.2-201ENST00000448875 158 ntBASIC4□□□□□ -1.77
E4F1Q66K89 MTCO3P8-201ENST00000453691 755 ntBASIC4□□□□□ -1.77
E4F1Q66K89 NDUFB4P9-201ENST00000511646 388 ntBASIC4□□□□□ -1.77
E4F1Q66K89 SNORA40.14-201ENST00000516543 86 ntBASIC4□□□□□ -1.77
E4F1Q66K89 RNU6-1271P-201ENST00000517049 105 ntBASIC4□□□□□ -1.77
E4F1Q66K89 Y_RNA.715-201ENST00000517082 110 ntBASIC4□□□□□ -1.77
E4F1Q66K89 AC009812.2-201ENST00000517657 457 ntBASIC4□□□□□ -1.77
E4F1Q66K89 AC144568.1-201ENST00000520139 137 ntBASIC4□□□□□ -1.77
E4F1Q66K89 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms