Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 RNU2-68P-201ENST00000410878 191 ntBASIC5.11□□□□□ -1.59
RNF20Q5VTR2 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.11□□□□□ -1.59
RNF20Q5VTR2 RPL23AP52-201ENST00000439311 478 ntBASIC5.11□□□□□ -1.59
RNF20Q5VTR2 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.11□□□□□ -1.59
RNF20Q5VTR2 AL592156.1-201ENST00000508758 304 ntBASIC5.11□□□□□ -1.59
RNF20Q5VTR2 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.11□□□□□ -1.59
RNF20Q5VTR2 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.11□□□□□ -1.59
RNF20Q5VTR2 H3F3AP1-201ENST00000559984 334 ntBASIC5.11□□□□□ -1.59
RNF20Q5VTR2 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.11□□□□□ -1.59
RNF20Q5VTR2 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.11□□□□□ -1.59
RNF20Q5VTR2 RPL23AP88-201ENST00000605759 454 ntBASIC5.11□□□□□ -1.59
RNF20Q5VTR2 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.11□□□□□ -1.59
RNF20Q5VTR2 U6.99-201ENST00000637524 83 ntBASIC5.11□□□□□ -1.59
RNF20Q5VTR2 AC241585.2-209ENST00000638217 143 ntBASIC5.11□□□□□ -1.59
RNF20Q5VTR2 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.11□□□□□ -1.59
RNF20Q5VTR2 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.11□□□□□ -1.59
RNF20Q5VTR2 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNF20Q5VTR2 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNF20Q5VTR2 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RNF20Q5VTR2 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF20Q5VTR2 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC5.11□□□□□ -1.59
RNF20Q5VTR2 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.11□□□□□ -1.59
RNF20Q5VTR2 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.11□□□□□ -1.59
RNF20Q5VTR2 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF20Q5VTR2 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF20Q5VTR2 RNU6-923P-201ENST00000364753 107 ntBASIC5.1□□□□□ -1.59
RNF20Q5VTR2 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RNF20Q5VTR2 RNY1P5-201ENST00000383890 115 ntBASIC5.1□□□□□ -1.59
RNF20Q5VTR2 Y_RNA.418-201ENST00000384029 102 ntBASIC5.1□□□□□ -1.59
RNF20Q5VTR2 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.1□□□□□ -1.59
RNF20Q5VTR2 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF20Q5VTR2 AL157831.1-201ENST00000426134 473 ntBASIC5.1□□□□□ -1.59
RNF20Q5VTR2 AP000907.1-201ENST00000428428 510 ntBASIC5.1□□□□□ -1.59
RNF20Q5VTR2 DNAJC19P7-201ENST00000428811 344 ntBASIC5.1□□□□□ -1.59
RNF20Q5VTR2 AL356867.1-201ENST00000429623 299 ntBASIC5.1□□□□□ -1.59
RNF20Q5VTR2 HLA-N-201ENST00000437516 135 ntBASIC5.1□□□□□ -1.59
RNF20Q5VTR2 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.1□□□□□ -1.59
RNF20Q5VTR2 RPL23AP49-201ENST00000492925 468 ntBASIC5.1□□□□□ -1.59
RNF20Q5VTR2 RNA5SP73-201ENST00000516744 108 ntBASIC5.1□□□□□ -1.59
RNF20Q5VTR2 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF20Q5VTR2 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF20Q5VTR2 MIR3921-201ENST00000577308 85 ntBASIC5.1□□□□□ -1.59
RNF20Q5VTR2 AC011921.3-201ENST00000605540 361 ntBASIC5.1□□□□□ -1.59
RNF20Q5VTR2 MIR432-201ENST00000606207 94 ntBASIC5.1□□□□□ -1.59
RNF20Q5VTR2 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF20Q5VTR2 AC090132.2-201ENST00000615881 347 ntBASIC5.1□□□□□ -1.59
RNF20Q5VTR2 RN7SL722P-201ENST00000617780 284 ntBASIC5.1□□□□□ -1.59
RNF20Q5VTR2 RN7SL565P-201ENST00000618246 284 ntBASIC5.1□□□□□ -1.59
RNF20Q5VTR2 AC008785.1-201ENST00000624475 456 ntBASIC5.1□□□□□ -1.59
RNF20Q5VTR2 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
RNF20Q5VTR2 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RNF20Q5VTR2 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
RNF20Q5VTR2 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
RNF20Q5VTR2 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF20Q5VTR2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF20Q5VTR2 ZNF826P-207ENST00000622273 1910 ntBASIC5.09□□□□□ -1.59
RNF20Q5VTR2 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RNF20Q5VTR2 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF20Q5VTR2 RNA5SP447-201ENST00000363749 119 ntBASIC5.09□□□□□ -1.59
RNF20Q5VTR2 Y_RNA.233-201ENST00000364407 101 ntBASIC5.09□□□□□ -1.59
RNF20Q5VTR2 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF20Q5VTR2 RNA5SP44-201ENST00000410446 133 ntBASIC5.09□□□□□ -1.59
RNF20Q5VTR2 ELOCP19-201ENST00000411919 318 ntBASIC5.09□□□□□ -1.59
RNF20Q5VTR2 RAB9AP3-201ENST00000412737 573 ntBASIC5.09□□□□□ -1.59
RNF20Q5VTR2 AC016769.2-201ENST00000414815 475 ntBASIC5.09□□□□□ -1.59
RNF20Q5VTR2 NDUFB4P7-201ENST00000423198 363 ntBASIC5.09□□□□□ -1.59
RNF20Q5VTR2 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF20Q5VTR2 AC124916.1-201ENST00000444020 547 ntBASIC5.09□□□□□ -1.59
RNF20Q5VTR2 RAB9AP1-201ENST00000449393 573 ntBASIC5.09□□□□□ -1.59
RNF20Q5VTR2 AL451050.1-201ENST00000450126 415 ntBASIC5.09□□□□□ -1.59
RNF20Q5VTR2 snoU13.1-201ENST00000459157 104 ntBASIC5.09□□□□□ -1.59
RNF20Q5VTR2 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF20Q5VTR2 MIR3144-201ENST00000579460 79 ntBASIC5.09□□□□□ -1.59
RNF20Q5VTR2 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.09□□□□□ -1.59
RNF20Q5VTR2 RMST_6.1-201ENST00000611980 203 ntBASIC5.09□□□□□ -1.59
RNF20Q5VTR2 MIR7702-201ENST00000621931 59 ntBASIC5.09□□□□□ -1.59
RNF20Q5VTR2 MIR4727-201ENST00000622232 55 ntBASIC5.09□□□□□ -1.59
RNF20Q5VTR2 AP000346.3-201ENST00000622821 210 ntBASIC5.09□□□□□ -1.59
RNF20Q5VTR2 U6.106-201ENST00000636360 105 ntBASIC5.09□□□□□ -1.59
RNF20Q5VTR2 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF20Q5VTR2 BX322639.1-202ENST00000423987 2213 ntBASIC5.09□□□□□ -1.59
RNF20Q5VTR2 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF20Q5VTR2 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF20Q5VTR2 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
RNF20Q5VTR2 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
RNF20Q5VTR2 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
RNF20Q5VTR2 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
RNF20Q5VTR2 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF20Q5VTR2 AC008725.1-201ENST00000605123 2263 ntBASIC5.08□□□□□ -1.6
RNF20Q5VTR2 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.08□□□□□ -1.6
RNF20Q5VTR2 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF20Q5VTR2 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF20Q5VTR2 Y_RNA.275-201ENST00000364726 110 ntBASIC5.08□□□□□ -1.6
RNF20Q5VTR2 Y_RNA.304-201ENST00000365011 112 ntBASIC5.08□□□□□ -1.6
RNF20Q5VTR2 RNU6-514P-201ENST00000384208 107 ntBASIC5.08□□□□□ -1.6
RNF20Q5VTR2 RNU6-1081P-201ENST00000384537 107 ntBASIC5.08□□□□□ -1.6
RNF20Q5VTR2 RNU5A-5P-201ENST00000411054 116 ntBASIC5.08□□□□□ -1.6
RNF20Q5VTR2 RPL19P1-201ENST00000411635 428 ntBASIC5.08□□□□□ -1.6
RNF20Q5VTR2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF20Q5VTR2 AC245028.1-201ENST00000423259 256 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms