Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RNF220Q5VTB9 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
RNF220Q5VTB9 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNF220Q5VTB9 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNF220Q5VTB9 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNF220Q5VTB9 RPL21P3-201ENST00000395517 478 ntBASIC3.34□□□□□ -1.87
RNF220Q5VTB9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.34□□□□□ -1.87
RNF220Q5VTB9 RN7SKP156-201ENST00000410308 342 ntBASIC3.34□□□□□ -1.87
RNF220Q5VTB9 AC074085.1-201ENST00000413598 418 ntBASIC3.34□□□□□ -1.87
RNF220Q5VTB9 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.34□□□□□ -1.87
RNF220Q5VTB9 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.34□□□□□ -1.87
RNF220Q5VTB9 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.34□□□□□ -1.87
RNF220Q5VTB9 AL358075.3-201ENST00000426289 226 ntBASIC3.34□□□□□ -1.87
RNF220Q5VTB9 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.34□□□□□ -1.87
RNF220Q5VTB9 AC097713.2-201ENST00000430199 356 ntBASIC3.34□□□□□ -1.87
RNF220Q5VTB9 AL591043.1-201ENST00000432461 424 ntBASIC3.34□□□□□ -1.87
RNF220Q5VTB9 AC124916.1-201ENST00000444020 547 ntBASIC3.34□□□□□ -1.87
RNF220Q5VTB9 AC146507.2-201ENST00000460608 476 ntBASIC3.34□□□□□ -1.87
RNF220Q5VTB9 RN7SL132P-201ENST00000478131 296 ntBASIC3.34□□□□□ -1.87
RNF220Q5VTB9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.34□□□□□ -1.87
RNF220Q5VTB9 MTND4LP22-201ENST00000508209 276 ntBASIC3.34□□□□□ -1.87
RNF220Q5VTB9 AC026402.1-201ENST00000513642 170 ntBASIC3.34□□□□□ -1.87
RNF220Q5VTB9 RNU5F-8P-201ENST00000515941 111 ntBASIC3.34□□□□□ -1.87
RNF220Q5VTB9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.34□□□□□ -1.87
RNF220Q5VTB9 AC105029.1-201ENST00000520250 669 ntBASIC3.34□□□□□ -1.87
RNF220Q5VTB9 AP005639.2-201ENST00000527592 928 ntBASIC3.34□□□□□ -1.87
RNF220Q5VTB9 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.34□□□□□ -1.87
RNF220Q5VTB9 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.34□□□□□ -1.87
RNF220Q5VTB9 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.34□□□□□ -1.87
RNF220Q5VTB9 AC103996.1-201ENST00000555468 102 ntBASIC3.34□□□□□ -1.87
RNF220Q5VTB9 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RNF220Q5VTB9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RNF220Q5VTB9 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RNF220Q5VTB9 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
RNF220Q5VTB9 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
RNF220Q5VTB9 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RNF220Q5VTB9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RNF220Q5VTB9 RNU6-428P-201ENST00000362942 107 ntBASIC3.33□□□□□ -1.88
RNF220Q5VTB9 RNU6-843P-201ENST00000384454 104 ntBASIC3.33□□□□□ -1.88
RNF220Q5VTB9 RNU6-95P-201ENST00000384697 107 ntBASIC3.33□□□□□ -1.88
RNF220Q5VTB9 AL356967.1-201ENST00000406305 431 ntBASIC3.33□□□□□ -1.88
RNF220Q5VTB9 MIR548K-201ENST00000408406 116 ntBASIC3.33□□□□□ -1.88
RNF220Q5VTB9 U3.39-201ENST00000408569 239 ntBASIC3.33□□□□□ -1.88
RNF220Q5VTB9 AC074117.2-201ENST00000417130 397 ntBASIC3.33□□□□□ -1.88
RNF220Q5VTB9 AL590632.1-201ENST00000424289 371 ntBASIC3.33□□□□□ -1.88
RNF220Q5VTB9 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.33□□□□□ -1.88
RNF220Q5VTB9 OSTCP8-201ENST00000445117 448 ntBASIC3.33□□□□□ -1.88
RNF220Q5VTB9 MTND1P17-201ENST00000448961 204 ntBASIC3.33□□□□□ -1.88
RNF220Q5VTB9 AC107399.1-201ENST00000451226 265 ntBASIC3.33□□□□□ -1.88
RNF220Q5VTB9 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.33□□□□□ -1.88
RNF220Q5VTB9 GZMAP1-201ENST00000503054 631 ntBASIC3.33□□□□□ -1.88
RNF220Q5VTB9 RNA5SP385-201ENST00000515947 110 ntBASIC3.33□□□□□ -1.88
RNF220Q5VTB9 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.33□□□□□ -1.88
RNF220Q5VTB9 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF220Q5VTB9 VN1R107P-201ENST00000601784 209 ntBASIC3.33□□□□□ -1.88
RNF220Q5VTB9 AL133393.1-201ENST00000603277 287 ntBASIC3.33□□□□□ -1.88
RNF220Q5VTB9 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF220Q5VTB9 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.33□□□□□ -1.88
RNF220Q5VTB9 AC244517.12-201ENST00000623581 663 ntBASIC3.33□□□□□ -1.88
RNF220Q5VTB9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF220Q5VTB9 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF220Q5VTB9 AC093831.2-201ENST00000624393 3427 ntBASIC3.32□□□□□ -1.88
RNF220Q5VTB9 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
RNF220Q5VTB9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF220Q5VTB9 HAUS6P2-201ENST00000433254 2404 ntBASIC3.32□□□□□ -1.88
RNF220Q5VTB9 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF220Q5VTB9 RNU6-105P-201ENST00000363909 104 ntBASIC3.32□□□□□ -1.88
RNF220Q5VTB9 RNU6-336P-201ENST00000364891 107 ntBASIC3.32□□□□□ -1.88
RNF220Q5VTB9 MT-TD-201ENST00000387419 68 ntBASIC3.32□□□□□ -1.88
RNF220Q5VTB9 MIR147B-201ENST00000390185 80 ntBASIC3.32□□□□□ -1.88
RNF220Q5VTB9 RPS29P13-201ENST00000402041 169 ntBASIC3.32□□□□□ -1.88
RNF220Q5VTB9 RNU2-41P-201ENST00000410991 178 ntBASIC3.32□□□□□ -1.88
RNF220Q5VTB9 RNU6-293P-201ENST00000411259 106 ntBASIC3.32□□□□□ -1.88
RNF220Q5VTB9 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.32□□□□□ -1.88
RNF220Q5VTB9 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF220Q5VTB9 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF220Q5VTB9 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.32□□□□□ -1.88
RNF220Q5VTB9 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.32□□□□□ -1.88
RNF220Q5VTB9 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF220Q5VTB9 RPS29P12-201ENST00000460178 152 ntBASIC3.32□□□□□ -1.88
RNF220Q5VTB9 AC133134.1-201ENST00000466800 359 ntBASIC3.32□□□□□ -1.88
RNF220Q5VTB9 RPS27P27-201ENST00000498779 255 ntBASIC3.32□□□□□ -1.88
RNF220Q5VTB9 MTND5P5-201ENST00000503764 376 ntBASIC3.32□□□□□ -1.88
RNF220Q5VTB9 AC007991.1-201ENST00000522680 631 ntBASIC3.32□□□□□ -1.88
RNF220Q5VTB9 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF220Q5VTB9 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF220Q5VTB9 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.32□□□□□ -1.88
RNF220Q5VTB9 AC005476.1-201ENST00000554427 397 ntBASIC3.32□□□□□ -1.88
RNF220Q5VTB9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.32□□□□□ -1.88
RNF220Q5VTB9 MIR5685-201ENST00000579080 79 ntBASIC3.32□□□□□ -1.88
RNF220Q5VTB9 FGF7P1-201ENST00000582820 288 ntBASIC3.32□□□□□ -1.88
RNF220Q5VTB9 AL160281.1-201ENST00000605307 311 ntBASIC3.32□□□□□ -1.88
RNF220Q5VTB9 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF220Q5VTB9 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.32□□□□□ -1.88
RNF220Q5VTB9 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF220Q5VTB9 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
RNF220Q5VTB9 AC002064.3-201ENST00000623448 346 ntBASIC3.32□□□□□ -1.88
RNF220Q5VTB9 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF220Q5VTB9 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF220Q5VTB9 AC099654.7-201ENST00000635788 2127 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 155.5 ms