Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC7.53□□□□□ -1.2
NCBP3Q53F19 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NCBP3Q53F19 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
NCBP3Q53F19 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
NCBP3Q53F19 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
NCBP3Q53F19 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NCBP3Q53F19 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC7.53□□□□□ -1.2
NCBP3Q53F19 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC7.53□□□□□ -1.2
NCBP3Q53F19 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NCBP3Q53F19 MIR375-201ENST00000362103 64 ntBASIC7.53□□□□□ -1.2
NCBP3Q53F19 SNORA64.1-201ENST00000362600 132 ntBASIC7.53□□□□□ -1.2
NCBP3Q53F19 Y_RNA.111-201ENST00000363248 100 ntBASIC7.53□□□□□ -1.2
NCBP3Q53F19 RNY4P6-201ENST00000363667 96 ntBASIC7.53□□□□□ -1.2
NCBP3Q53F19 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
NCBP3Q53F19 AL139095.1-201ENST00000404326 391 ntBASIC7.53□□□□□ -1.2
NCBP3Q53F19 SNORA11B-201ENST00000408175 129 ntBASIC7.53□□□□□ -1.2
NCBP3Q53F19 RNU7-149P-201ENST00000516739 59 ntBASIC7.53□□□□□ -1.2
NCBP3Q53F19 RNU6-928P-201ENST00000516876 104 ntBASIC7.53□□□□□ -1.2
NCBP3Q53F19 RPS15AP11-201ENST00000594193 385 ntBASIC7.53□□□□□ -1.2
NCBP3Q53F19 HSPE1P7-201ENST00000604681 321 ntBASIC7.53□□□□□ -1.2
NCBP3Q53F19 MIR6729-201ENST00000618194 65 ntBASIC7.53□□□□□ -1.2
NCBP3Q53F19 AC063976.2-201ENST00000425667 3556 ntBASIC7.53□□□□□ -1.2
NCBP3Q53F19 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
NCBP3Q53F19 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NCBP3Q53F19 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
NCBP3Q53F19 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
NCBP3Q53F19 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
NCBP3Q53F19 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
NCBP3Q53F19 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
NCBP3Q53F19 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC7.52□□□□□ -1.21
NCBP3Q53F19 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
NCBP3Q53F19 Y_RNA.486-201ENST00000384398 107 ntBASIC7.52□□□□□ -1.21
NCBP3Q53F19 RNA5SP239-201ENST00000410218 129 ntBASIC7.52□□□□□ -1.21
NCBP3Q53F19 Y_RNA.593-201ENST00000410292 98 ntBASIC7.52□□□□□ -1.21
NCBP3Q53F19 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC7.52□□□□□ -1.21
NCBP3Q53F19 PPIAP20-201ENST00000449839 135 ntBASIC7.52□□□□□ -1.21
NCBP3Q53F19 AL445665.1-202ENST00000452436 324 ntBASIC7.52□□□□□ -1.21
NCBP3Q53F19 RNA5SP20-201ENST00000515976 84 ntBASIC7.52□□□□□ -1.21
NCBP3Q53F19 SNORA70.20-201ENST00000516848 126 ntBASIC7.52□□□□□ -1.21
NCBP3Q53F19 AP004609.2-201ENST00000532177 190 ntBASIC7.52□□□□□ -1.21
NCBP3Q53F19 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC7.52□□□□□ -1.21
NCBP3Q53F19 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC7.52□□□□□ -1.21
NCBP3Q53F19 MIR3202-2-201ENST00000635980 79 ntBASIC7.52□□□□□ -1.21
NCBP3Q53F19 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NCBP3Q53F19 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NCBP3Q53F19 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
NCBP3Q53F19 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NCBP3Q53F19 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NCBP3Q53F19 Y_RNA.78-201ENST00000362970 110 ntBASIC7.51□□□□□ -1.21
NCBP3Q53F19 Y_RNA.203-201ENST00000364106 102 ntBASIC7.51□□□□□ -1.21
NCBP3Q53F19 SNORA51.4-201ENST00000364993 124 ntBASIC7.51□□□□□ -1.21
NCBP3Q53F19 BMS1P17-202ENST00000416720 316 ntBASIC7.51□□□□□ -1.21
NCBP3Q53F19 AC008134.1-201ENST00000420943 193 ntBASIC7.51□□□□□ -1.21
NCBP3Q53F19 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC7.51□□□□□ -1.21
NCBP3Q53F19 RPS29P14-201ENST00000431518 171 ntBASIC7.51□□□□□ -1.21
NCBP3Q53F19 RBMY2UP-201ENST00000453474 324 ntBASIC7.51□□□□□ -1.21
NCBP3Q53F19 AP000873.1-201ENST00000463987 400 ntBASIC7.51□□□□□ -1.21
NCBP3Q53F19 RNA5SP395-201ENST00000516567 118 ntBASIC7.51□□□□□ -1.21
NCBP3Q53F19 IGLV3-30-201ENST00000524362 298 ntBASIC7.51□□□□□ -1.21
NCBP3Q53F19 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC7.51□□□□□ -1.21
NCBP3Q53F19 GNRHR2P1-201ENST00000555315 631 ntBASIC7.51□□□□□ -1.21
NCBP3Q53F19 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.51□□□□□ -1.21
NCBP3Q53F19 MIR6862-1-201ENST00000613016 70 ntBASIC7.51□□□□□ -1.21
NCBP3Q53F19 MIR6862-2-201ENST00000614755 70 ntBASIC7.51□□□□□ -1.21
NCBP3Q53F19 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC7.51□□□□□ -1.21
NCBP3Q53F19 5S_rRNA.13-201ENST00000622298 123 ntBASIC7.51□□□□□ -1.21
NCBP3Q53F19 AC104964.3-201ENST00000606115 2860 ntBASIC7.51□□□□□ -1.21
NCBP3Q53F19 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
NCBP3Q53F19 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
NCBP3Q53F19 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NCBP3Q53F19 ANKRD20A9P-201ENST00000457997 2978 ntBASIC7.5□□□□□ -1.21
NCBP3Q53F19 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NCBP3Q53F19 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
NCBP3Q53F19 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NCBP3Q53F19 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NCBP3Q53F19 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NCBP3Q53F19 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
NCBP3Q53F19 AL590240.1-201ENST00000334118 313 ntBASIC7.5□□□□□ -1.21
NCBP3Q53F19 Y_RNA.244-201ENST00000364484 109 ntBASIC7.5□□□□□ -1.21
NCBP3Q53F19 RNA5SP131-201ENST00000365452 119 ntBASIC7.5□□□□□ -1.21
NCBP3Q53F19 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NCBP3Q53F19 Y_RNA.466-201ENST00000384294 113 ntBASIC7.5□□□□□ -1.21
NCBP3Q53F19 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
NCBP3Q53F19 RN7SKP177-201ENST00000410567 355 ntBASIC7.5□□□□□ -1.21
NCBP3Q53F19 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC7.5□□□□□ -1.21
NCBP3Q53F19 HLA-DPA3-207ENST00000454398 229 ntBASIC7.5□□□□□ -1.21
NCBP3Q53F19 RPS3P1-201ENST00000456781 192 ntBASIC7.5□□□□□ -1.21
NCBP3Q53F19 SNORD11-201ENST00000459124 84 ntBASIC7.5□□□□□ -1.21
NCBP3Q53F19 SNORD65B-201ENST00000459126 73 ntBASIC7.5□□□□□ -1.21
NCBP3Q53F19 snoU13.14-201ENST00000459372 104 ntBASIC7.5□□□□□ -1.21
NCBP3Q53F19 RPL27AP5-201ENST00000469428 449 ntBASIC7.5□□□□□ -1.21
NCBP3Q53F19 HMGN2P9-201ENST00000476875 229 ntBASIC7.5□□□□□ -1.21
NCBP3Q53F19 AC011406.1-201ENST00000512440 370 ntBASIC7.5□□□□□ -1.21
NCBP3Q53F19 RNU6-521P-201ENST00000516663 105 ntBASIC7.5□□□□□ -1.21
NCBP3Q53F19 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.5□□□□□ -1.21
NCBP3Q53F19 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC7.5□□□□□ -1.21
NCBP3Q53F19 RN7SL753P-201ENST00000581238 290 ntBASIC7.5□□□□□ -1.21
NCBP3Q53F19 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC7.5□□□□□ -1.21
NCBP3Q53F19 Six3os1_7.1-201ENST00000621512 201 ntBASIC7.5□□□□□ -1.21
NCBP3Q53F19 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms