Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 AC007919.1-201ENST00000429380 217 ntBASIC0.71□□□□□ -2.3
CPSF1Q10570 RPL31P54-201ENST00000429803 370 ntBASIC0.71□□□□□ -2.3
CPSF1Q10570 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.71□□□□□ -2.3
CPSF1Q10570 MTCO2P20-201ENST00000437339 673 ntBASIC0.71□□□□□ -2.3
CPSF1Q10570 AL135790.2-201ENST00000437701 267 ntBASIC0.71□□□□□ -2.3
CPSF1Q10570 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.71□□□□□ -2.3
CPSF1Q10570 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.71□□□□□ -2.3
CPSF1Q10570 AP003034.1-201ENST00000534621 422 ntBASIC0.71□□□□□ -2.3
CPSF1Q10570 AL132857.1-201ENST00000555180 708 ntBASIC0.71□□□□□ -2.3
CPSF1Q10570 AP005229.2-201ENST00000609980 697 ntBASIC0.71□□□□□ -2.3
CPSF1Q10570 AC022513.1-201ENST00000624512 117 ntBASIC0.71□□□□□ -2.3
CPSF1Q10570 OR4G3P-201ENST00000633500 913 ntBASIC0.71□□□□□ -2.3
CPSF1Q10570 AC083865.1-201ENST00000636634 831 ntBASIC0.71□□□□□ -2.3
CPSF1Q10570 SNORD115-3-201ENST00000363100 82 ntBASIC0.7□□□□□ -2.3
CPSF1Q10570 CST2P1-201ENST00000425770 87 ntBASIC0.7□□□□□ -2.3
CPSF1Q10570 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CPSF1Q10570 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.7□□□□□ -2.3
CPSF1Q10570 RPL30P7-201ENST00000479312 323 ntBASIC0.7□□□□□ -2.3
CPSF1Q10570 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
CPSF1Q10570 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.7□□□□□ -2.3
CPSF1Q10570 VN1R88P-201ENST00000596787 292 ntBASIC0.7□□□□□ -2.3
CPSF1Q10570 AC091152.3-201ENST00000604227 325 ntBASIC0.7□□□□□ -2.3
CPSF1Q10570 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
CPSF1Q10570 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.7□□□□□ -2.3
CPSF1Q10570 RNA5SP511-201ENST00000410487 115 ntBASIC0.69□□□□□ -2.3
CPSF1Q10570 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.69□□□□□ -2.3
CPSF1Q10570 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.69□□□□□ -2.3
CPSF1Q10570 RPL9P9-202ENST00000466501 579 ntBASIC0.69□□□□□ -2.3
CPSF1Q10570 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.69□□□□□ -2.3
CPSF1Q10570 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.69□□□□□ -2.3
CPSF1Q10570 AC004067.1-201ENST00000608733 700 ntBASIC0.69□□□□□ -2.3
CPSF1Q10570 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.69□□□□□ -2.3
CPSF1Q10570 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.68□□□□□ -2.3
CPSF1Q10570 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.68□□□□□ -2.3
CPSF1Q10570 RNU2-33P-201ENST00000410344 192 ntBASIC0.68□□□□□ -2.3
CPSF1Q10570 RN7SKP200-201ENST00000410564 320 ntBASIC0.68□□□□□ -2.3
CPSF1Q10570 UBE2V2P3-201ENST00000433562 437 ntBASIC0.68□□□□□ -2.3
CPSF1Q10570 AP001324.2-201ENST00000461163 319 ntBASIC0.68□□□□□ -2.3
CPSF1Q10570 AK3P2-201ENST00000507976 429 ntBASIC0.68□□□□□ -2.3
CPSF1Q10570 SNORA48.9-201ENST00000516419 162 ntBASIC0.68□□□□□ -2.3
CPSF1Q10570 AP003355.1-201ENST00000518956 587 ntBASIC0.68□□□□□ -2.3
CPSF1Q10570 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.68□□□□□ -2.3
CPSF1Q10570 RAB11AP2-201ENST00000545905 639 ntBASIC0.68□□□□□ -2.3
CPSF1Q10570 AC125611.1-201ENST00000549563 229 ntBASIC0.68□□□□□ -2.3
CPSF1Q10570 AC021739.1-201ENST00000559631 174 ntBASIC0.68□□□□□ -2.3
CPSF1Q10570 AC002400.1-201ENST00000569310 726 ntBASIC0.68□□□□□ -2.3
CPSF1Q10570 MIR3167-201ENST00000579623 85 ntBASIC0.68□□□□□ -2.3
CPSF1Q10570 DUXAP11-201ENST00000603858 526 ntBASIC0.68□□□□□ -2.3
CPSF1Q10570 ELOCP5-201ENST00000604924 333 ntBASIC0.68□□□□□ -2.3
CPSF1Q10570 AC090970.3-201ENST00000612566 866 ntBASIC0.68□□□□□ -2.3
CPSF1Q10570 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CPSF1Q10570 MTCO1P23-201ENST00000415223 1526 ntBASIC0.67□□□□□ -2.3
CPSF1Q10570 VTRNA1-3-201ENST00000365645 89 ntBASIC0.67□□□□□ -2.3
CPSF1Q10570 MTCYBP32-201ENST00000427945 1084 ntBASIC0.67□□□□□ -2.3
CPSF1Q10570 RPL36AP48-201ENST00000485521 314 ntBASIC0.67□□□□□ -2.3
CPSF1Q10570 AP001025.1-201ENST00000486139 332 ntBASIC0.67□□□□□ -2.3
CPSF1Q10570 AC108078.1-201ENST00000508073 725 ntBASIC0.67□□□□□ -2.3
CPSF1Q10570 RNA5SP404-201ENST00000517118 132 ntBASIC0.67□□□□□ -2.3
CPSF1Q10570 AP006587.4-201ENST00000526053 529 ntBASIC0.67□□□□□ -2.3
CPSF1Q10570 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CPSF1Q10570 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.67□□□□□ -2.3
CPSF1Q10570 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.67□□□□□ -2.3
CPSF1Q10570 AC090079.2-201ENST00000575289 768 ntBASIC0.67□□□□□ -2.3
CPSF1Q10570 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.67□□□□□ -2.3
CPSF1Q10570 AC243829.6-201ENST00000612652 106 ntBASIC0.67□□□□□ -2.3
CPSF1Q10570 MIR2909-201ENST00000617113 69 ntBASIC0.67□□□□□ -2.3
CPSF1Q10570 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.67□□□□□ -2.3
CPSF1Q10570 AC119674.1-220ENST00000641502 1048 ntBASIC0.67□□□□□ -2.3
CPSF1Q10570 MTND5P11-201ENST00000511037 1812 ntBASIC0.67□□□□□ -2.3
CPSF1Q10570 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CPSF1Q10570 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CPSF1Q10570 RNU6-878P-201ENST00000384578 110 ntBASIC0.66□□□□□ -2.3
CPSF1Q10570 AL591034.2-201ENST00000402839 359 ntBASIC0.66□□□□□ -2.3
CPSF1Q10570 RNA5SP127-201ENST00000411051 133 ntBASIC0.66□□□□□ -2.3
CPSF1Q10570 AC078974.1-201ENST00000411597 223 ntBASIC0.66□□□□□ -2.3
CPSF1Q10570 PSMA6P3-201ENST00000428242 164 ntBASIC0.66□□□□□ -2.3
CPSF1Q10570 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.66□□□□□ -2.3
CPSF1Q10570 AC244505.3-201ENST00000454598 187 ntBASIC0.66□□□□□ -2.3
CPSF1Q10570 RPS26P55-201ENST00000471178 356 ntBASIC0.66□□□□□ -2.3
CPSF1Q10570 AL133373.1-201ENST00000497098 94 ntBASIC0.66□□□□□ -2.3
CPSF1Q10570 AC090115.3-201ENST00000553218 849 ntBASIC0.66□□□□□ -2.3
CPSF1Q10570 AC242628.1-201ENST00000606810 391 ntBASIC0.66□□□□□ -2.3
CPSF1Q10570 AC024257.5-201ENST00000612739 531 ntBASIC0.66□□□□□ -2.3
CPSF1Q10570 AC106800.4-201ENST00000614905 153 ntBASIC0.66□□□□□ -2.3
CPSF1Q10570 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
CPSF1Q10570 RNU6-733P-201ENST00000410759 104 ntBASIC0.65□□□□□ -2.3
CPSF1Q10570 CCDC58P2-201ENST00000417131 366 ntBASIC0.65□□□□□ -2.3
CPSF1Q10570 AC009518.2-201ENST00000418056 731 ntBASIC0.65□□□□□ -2.3
CPSF1Q10570 AC245102.2-201ENST00000448956 180 ntBASIC0.65□□□□□ -2.3
CPSF1Q10570 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.65□□□□□ -2.3
CPSF1Q10570 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
CPSF1Q10570 SNORA25.11-201ENST00000515935 105 ntBASIC0.65□□□□□ -2.3
CPSF1Q10570 ADAM3B-201ENST00000569937 840 ntBASIC0.65□□□□□ -2.3
CPSF1Q10570 AL360085.1-201ENST00000604713 532 ntBASIC0.65□□□□□ -2.3
CPSF1Q10570 AF129408.1-201ENST00000608767 431 ntBASIC0.65□□□□□ -2.3
CPSF1Q10570 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.65□□□□□ -2.3
CPSF1Q10570 AC091965.5-201ENST00000624785 342 ntBASIC0.65□□□□□ -2.3
CPSF1Q10570 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
CPSF1Q10570 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
CPSF1Q10570 MIR1197-201ENST00000408818 88 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms