Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
GABPAQ06546 CISD1P1-201ENST00000393907 327 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 AC096649.2-201ENST00000416186 393 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 MTND3P17-201ENST00000416968 344 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 TOMM20P4-201ENST00000427861 435 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 GPR143P-201ENST00000434155 205 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 MTCO1P19-201ENST00000443487 500 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.5□□□□□ -2.01
GABPAQ06546 AC027673.1-201ENST00000456245 405 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 AC010424.1-201ENST00000506336 297 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.5□□□□□ -2.01
GABPAQ06546 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 SCARNA17.1-201ENST00000516211 143 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 RNU6-581P-201ENST00000516214 105 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 SCARNA17.2-201ENST00000516334 143 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 SNORA31.19-201ENST00000517079 126 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.5□□□□□ -2.01
GABPAQ06546 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.5□□□□□ -2.01
GABPAQ06546 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
GABPAQ06546 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
GABPAQ06546 AC006199.1-201ENST00000548728 219 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.5□□□□□ -2.01
GABPAQ06546 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.5□□□□□ -2.01
GABPAQ06546 LINC00933-203ENST00000559812 219 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 MIR4528-201ENST00000577763 90 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.5□□□□□ -2.01
GABPAQ06546 MIR5002-201ENST00000584713 97 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.5□□□□□ -2.01
GABPAQ06546 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.5□□□□□ -2.01
GABPAQ06546 RN7SKP299-201ENST00000606679 301 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 AC010678.1-201ENST00000614118 713 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 SCARNA17.4-201ENST00000614296 143 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
GABPAQ06546 AC072046.2-201ENST00000618366 268 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 MIR7843-201ENST00000622274 79 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 AL157786.1-207ENST00000627771 695 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 AC241585.2-209ENST00000638217 143 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 ZNF355P-201ENST00000427301 3216 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
GABPAQ06546 AC103710.2-202ENST00000641454 2853 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
GABPAQ06546 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
GABPAQ06546 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
GABPAQ06546 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
GABPAQ06546 CKAP2P1-201ENST00000555477 2049 ntBASIC2.49□□□□□ -2.01
GABPAQ06546 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.49□□□□□ -2.01
GABPAQ06546 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
GABPAQ06546 RNU6-61P-201ENST00000365528 109 ntBASIC2.49□□□□□ -2.01
GABPAQ06546 RNU6-348P-201ENST00000384386 107 ntBASIC2.49□□□□□ -2.01
GABPAQ06546 Y_RNA.553-201ENST00000384670 102 ntBASIC2.49□□□□□ -2.01
GABPAQ06546 GSTA9P-201ENST00000406231 611 ntBASIC2.49□□□□□ -2.01
GABPAQ06546 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.49□□□□□ -2.01
GABPAQ06546 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.49□□□□□ -2.01
GABPAQ06546 PIGFP2-201ENST00000421400 651 ntBASIC2.49□□□□□ -2.01
GABPAQ06546 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.49□□□□□ -2.01
GABPAQ06546 AL161651.1-201ENST00000440882 223 ntBASIC2.49□□□□□ -2.01
GABPAQ06546 MTND2P22-201ENST00000444325 1033 ntBASIC2.49□□□□□ -2.01
GABPAQ06546 OSTCP8-201ENST00000445117 448 ntBASIC2.49□□□□□ -2.01
GABPAQ06546 AL360221.1-201ENST00000445989 335 ntBASIC2.49□□□□□ -2.01
GABPAQ06546 MTCYBP1-201ENST00000454315 1119 ntBASIC2.49□□□□□ -2.01
GABPAQ06546 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.49□□□□□ -2.01
GABPAQ06546 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.49□□□□□ -2.01
GABPAQ06546 MTCO3P28-201ENST00000513351 515 ntBASIC2.49□□□□□ -2.01
GABPAQ06546 AC022447.1-201ENST00000515358 464 ntBASIC2.49□□□□□ -2.01
GABPAQ06546 RNU6-410P-201ENST00000517006 107 ntBASIC2.49□□□□□ -2.01
GABPAQ06546 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.49□□□□□ -2.01
GABPAQ06546 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.49□□□□□ -2.01
GABPAQ06546 AC012213.3-201ENST00000577199 777 ntBASIC2.49□□□□□ -2.01
GABPAQ06546 DEFB131E-202ENST00000602581 683 ntBASIC2.49□□□□□ -2.01
GABPAQ06546 AC135507.1-201ENST00000607214 561 ntBASIC2.49□□□□□ -2.01
GABPAQ06546 AC009318.2-201ENST00000610917 651 ntBASIC2.49□□□□□ -2.01
GABPAQ06546 AC093648.1-201ENST00000623546 606 ntBASIC2.49□□□□□ -2.01
GABPAQ06546 AC090582.1-201ENST00000636321 199 ntBASIC2.49□□□□□ -2.01
GABPAQ06546 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.49□□□□□ -2.01
GABPAQ06546 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.49□□□□□ -2.01
GABPAQ06546 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
GABPAQ06546 RNA5SP432-201ENST00000362480 116 ntBASIC2.48□□□□□ -2.01
GABPAQ06546 SNORA68.1-201ENST00000364537 132 ntBASIC2.48□□□□□ -2.01
GABPAQ06546 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
GABPAQ06546 SNORD116-1-201ENST00000384335 95 ntBASIC2.48□□□□□ -2.01
GABPAQ06546 MIR627-201ENST00000384979 97 ntBASIC2.48□□□□□ -2.01
GABPAQ06546 OR51A5P-201ENST00000415429 942 ntBASIC2.48□□□□□ -2.01
GABPAQ06546 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.48□□□□□ -2.01
GABPAQ06546 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.48□□□□□ -2.01
GABPAQ06546 MTCO2P34-201ENST00000421994 607 ntBASIC2.48□□□□□ -2.01
GABPAQ06546 AL160275.3-201ENST00000423876 471 ntBASIC2.48□□□□□ -2.01
GABPAQ06546 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.48□□□□□ -2.01
GABPAQ06546 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.48□□□□□ -2.01
GABPAQ06546 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.48□□□□□ -2.01
GABPAQ06546 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.48□□□□□ -2.01
GABPAQ06546 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.48□□□□□ -2.01
GABPAQ06546 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.48□□□□□ -2.01
GABPAQ06546 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.48□□□□□ -2.01
GABPAQ06546 AC079781.2-201ENST00000446424 169 ntBASIC2.48□□□□□ -2.01
GABPAQ06546 KLF3P2-201ENST00000465138 268 ntBASIC2.48□□□□□ -2.01
GABPAQ06546 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.48□□□□□ -2.01
GABPAQ06546 AC026801.1-201ENST00000497178 464 ntBASIC2.48□□□□□ -2.01
GABPAQ06546 GZMAP1-201ENST00000503054 631 ntBASIC2.48□□□□□ -2.01
GABPAQ06546 COX6CP5-201ENST00000527162 228 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms