Protein–RNA interactions for Protein: Q01831

XPC, DNA repair protein complementing XP-C cells, humanhuman

Predicted RBP Predictions only

Length 940 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPCQ01831 RN7SL429P-201ENST00000479090 223 ntBASIC4.79□□□□□ -1.64
XPCQ01831 RN7SL489P-201ENST00000486185 223 ntBASIC4.79□□□□□ -1.64
XPCQ01831 RN7SL327P-201ENST00000488659 223 ntBASIC4.79□□□□□ -1.64
XPCQ01831 AC069499.1-201ENST00000489433 509 ntBASIC4.79□□□□□ -1.64
XPCQ01831 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.79□□□□□ -1.64
XPCQ01831 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.79□□□□□ -1.64
XPCQ01831 RNA5SP384-201ENST00000516615 116 ntBASIC4.79□□□□□ -1.64
XPCQ01831 SNORA31.19-201ENST00000517079 126 ntBASIC4.79□□□□□ -1.64
XPCQ01831 RN7SKP295-201ENST00000517264 153 ntBASIC4.79□□□□□ -1.64
XPCQ01831 RNU6-6P-201ENST00000606623 107 ntBASIC4.79□□□□□ -1.64
XPCQ01831 AC006023.2-201ENST00000609916 167 ntBASIC4.79□□□□□ -1.64
XPCQ01831 RN7SL853P-201ENST00000617250 223 ntBASIC4.79□□□□□ -1.64
XPCQ01831 AL732372.2-225ENST00000642124 456 ntBASIC4.79□□□□□ -1.64
XPCQ01831 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
XPCQ01831 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
XPCQ01831 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.79□□□□□ -1.64
XPCQ01831 HSPA8P1-201ENST00000425843 1833 ntBASIC4.79□□□□□ -1.64
XPCQ01831 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.78□□□□□ -1.64
XPCQ01831 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.78□□□□□ -1.64
XPCQ01831 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.78□□□□□ -1.64
XPCQ01831 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
XPCQ01831 Y_RNA.145-201ENST00000363527 102 ntBASIC4.78□□□□□ -1.64
XPCQ01831 RNU6-842P-201ENST00000384269 107 ntBASIC4.78□□□□□ -1.64
XPCQ01831 RN7SKP53-201ENST00000411337 315 ntBASIC4.78□□□□□ -1.64
XPCQ01831 AC092047.1-201ENST00000424997 240 ntBASIC4.78□□□□□ -1.64
XPCQ01831 SNRPEP9-201ENST00000436794 238 ntBASIC4.78□□□□□ -1.64
XPCQ01831 NDUFB4P6-201ENST00000436819 366 ntBASIC4.78□□□□□ -1.64
XPCQ01831 AL356535.1-201ENST00000440335 398 ntBASIC4.78□□□□□ -1.64
XPCQ01831 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.78□□□□□ -1.64
XPCQ01831 AC113155.1-201ENST00000511141 769 ntBASIC4.78□□□□□ -1.64
XPCQ01831 RNU6-470P-201ENST00000515954 104 ntBASIC4.78□□□□□ -1.64
XPCQ01831 SCARNA16.2-201ENST00000516520 172 ntBASIC4.78□□□□□ -1.64
XPCQ01831 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.78□□□□□ -1.64
XPCQ01831 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.78□□□□□ -1.64
XPCQ01831 MIR5004-201ENST00000579078 107 ntBASIC4.78□□□□□ -1.64
XPCQ01831 AC008737.2-201ENST00000599446 118 ntBASIC4.78□□□□□ -1.64
XPCQ01831 AP001836.1-201ENST00000604675 523 ntBASIC4.78□□□□□ -1.64
XPCQ01831 MIR486-1-201ENST00000612171 68 ntBASIC4.78□□□□□ -1.64
XPCQ01831 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.78□□□□□ -1.64
XPCQ01831 AC099506.2-201ENST00000623074 221 ntBASIC4.78□□□□□ -1.64
XPCQ01831 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
XPCQ01831 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
XPCQ01831 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
XPCQ01831 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
XPCQ01831 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
XPCQ01831 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
XPCQ01831 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
XPCQ01831 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
XPCQ01831 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
XPCQ01831 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
XPCQ01831 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
XPCQ01831 Y_RNA.148-201ENST00000363557 117 ntBASIC4.77□□□□□ -1.65
XPCQ01831 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
XPCQ01831 DEFB109C-201ENST00000382575 264 ntBASIC4.77□□□□□ -1.65
XPCQ01831 DEFB109B-201ENST00000382656 264 ntBASIC4.77□□□□□ -1.65
XPCQ01831 RNU6-166P-201ENST00000384371 107 ntBASIC4.77□□□□□ -1.65
XPCQ01831 MIR10A-201ENST00000385043 110 ntBASIC4.77□□□□□ -1.65
XPCQ01831 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
XPCQ01831 AC007560.1-201ENST00000426912 237 ntBASIC4.77□□□□□ -1.65
XPCQ01831 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.77□□□□□ -1.65
XPCQ01831 ANP32BP2-201ENST00000454525 545 ntBASIC4.77□□□□□ -1.65
XPCQ01831 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.77□□□□□ -1.65
XPCQ01831 RNU6-572P-201ENST00000516724 80 ntBASIC4.77□□□□□ -1.65
XPCQ01831 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
XPCQ01831 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.77□□□□□ -1.65
XPCQ01831 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.77□□□□□ -1.65
XPCQ01831 MIR4276-201ENST00000584832 70 ntBASIC4.77□□□□□ -1.65
XPCQ01831 AL645944.1-201ENST00000603857 493 ntBASIC4.77□□□□□ -1.65
XPCQ01831 AL121917.1-203ENST00000605534 577 ntBASIC4.77□□□□□ -1.65
XPCQ01831 Z69720.2-201ENST00000624755 279 ntBASIC4.77□□□□□ -1.65
XPCQ01831 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
XPCQ01831 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
XPCQ01831 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
XPCQ01831 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
XPCQ01831 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
XPCQ01831 RNU6-140P-201ENST00000384566 108 ntBASIC4.76□□□□□ -1.65
XPCQ01831 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
XPCQ01831 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.76□□□□□ -1.65
XPCQ01831 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.76□□□□□ -1.65
XPCQ01831 AC011742.1-201ENST00000431448 434 ntBASIC4.76□□□□□ -1.65
XPCQ01831 ATP5HP2-201ENST00000433885 485 ntBASIC4.76□□□□□ -1.65
XPCQ01831 AC092573.2-201ENST00000434546 243 ntBASIC4.76□□□□□ -1.65
XPCQ01831 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.76□□□□□ -1.65
XPCQ01831 AC092798.1-201ENST00000458542 409 ntBASIC4.76□□□□□ -1.65
XPCQ01831 AC008571.1-201ENST00000467232 300 ntBASIC4.76□□□□□ -1.65
XPCQ01831 AC006445.1-201ENST00000491925 405 ntBASIC4.76□□□□□ -1.65
XPCQ01831 RPL30P5-201ENST00000494923 336 ntBASIC4.76□□□□□ -1.65
XPCQ01831 PTP4A1P4-201ENST00000512479 322 ntBASIC4.76□□□□□ -1.65
XPCQ01831 TRAV32-201ENST00000553993 340 ntBASIC4.76□□□□□ -1.65
XPCQ01831 HMGB1P14-201ENST00000557424 591 ntBASIC4.76□□□□□ -1.65
XPCQ01831 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.76□□□□□ -1.65
XPCQ01831 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.76□□□□□ -1.65
XPCQ01831 AL162713.1-201ENST00000604480 262 ntBASIC4.76□□□□□ -1.65
XPCQ01831 AL591516.1-201ENST00000611326 274 ntBASIC4.76□□□□□ -1.65
XPCQ01831 AC083806.3-201ENST00000614016 455 ntBASIC4.76□□□□□ -1.65
XPCQ01831 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
XPCQ01831 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
XPCQ01831 AC008725.1-201ENST00000605123 2263 ntBASIC4.76□□□□□ -1.65
XPCQ01831 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.76□□□□□ -1.65
XPCQ01831 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms