Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.12□□□□□ -2.23
H3F3AP84243 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.12□□□□□ -2.23
H3F3AP84243 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.12□□□□□ -2.23
H3F3AP84243 MIR4422-201ENST00000581938 83 ntBASIC1.12□□□□□ -2.23
H3F3AP84243 AC023043.2-201ENST00000589678 1026 ntBASIC1.12□□□□□ -2.23
H3F3AP84243 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.12□□□□□ -2.23
H3F3AP84243 AC098483.2-201ENST00000603158 454 ntBASIC1.12□□□□□ -2.23
H3F3AP84243 AC021755.4-201ENST00000616620 456 ntBASIC1.12□□□□□ -2.23
H3F3AP84243 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.12□□□□□ -2.23
H3F3AP84243 AC099654.9-201ENST00000637055 678 ntBASIC1.12□□□□□ -2.23
H3F3AP84243 AC092447.10-201ENST00000620607 1652 ntBASIC1.12□□□□□ -2.23
H3F3AP84243 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.12□□□□□ -2.23
H3F3AP84243 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
H3F3AP84243 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
H3F3AP84243 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
H3F3AP84243 RNU6-288P-201ENST00000363690 104 ntBASIC1.11□□□□□ -2.23
H3F3AP84243 RNU6-546P-201ENST00000383991 107 ntBASIC1.11□□□□□ -2.23
H3F3AP84243 RNU6-207P-201ENST00000384137 107 ntBASIC1.11□□□□□ -2.23
H3F3AP84243 AL079342.2-201ENST00000403367 482 ntBASIC1.11□□□□□ -2.23
H3F3AP84243 USP9YP35-201ENST00000435696 412 ntBASIC1.11□□□□□ -2.23
H3F3AP84243 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.11□□□□□ -2.23
H3F3AP84243 snoU13.9-201ENST00000458927 103 ntBASIC1.11□□□□□ -2.23
H3F3AP84243 AC104629.1-201ENST00000494226 508 ntBASIC1.11□□□□□ -2.23
H3F3AP84243 RNU2-53P-201ENST00000516257 147 ntBASIC1.11□□□□□ -2.23
H3F3AP84243 RNU6-1225P-201ENST00000516336 65 ntBASIC1.11□□□□□ -2.23
H3F3AP84243 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.11□□□□□ -2.23
H3F3AP84243 AC136619.2-201ENST00000563361 631 ntBASIC1.11□□□□□ -2.23
H3F3AP84243 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.11□□□□□ -2.23
H3F3AP84243 AC073413.2-201ENST00000604332 360 ntBASIC1.11□□□□□ -2.23
H3F3AP84243 AC010900.2-201ENST00000604508 210 ntBASIC1.11□□□□□ -2.23
H3F3AP84243 snoU13.31-201ENST00000607291 104 ntBASIC1.11□□□□□ -2.23
H3F3AP84243 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.11□□□□□ -2.23
H3F3AP84243 AC097655.1-201ENST00000635075 318 ntBASIC1.11□□□□□ -2.23
H3F3AP84243 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.11□□□□□ -2.23
H3F3AP84243 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
H3F3AP84243 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
H3F3AP84243 ZNF29P-201ENST00000225587 168 ntBASIC1.1□□□□□ -2.23
H3F3AP84243 RNU6-744P-201ENST00000365557 107 ntBASIC1.1□□□□□ -2.23
H3F3AP84243 RNU6-1316P-201ENST00000384242 108 ntBASIC1.1□□□□□ -2.23
H3F3AP84243 AC068533.2-201ENST00000411872 306 ntBASIC1.1□□□□□ -2.23
H3F3AP84243 AC004965.1-201ENST00000413033 213 ntBASIC1.1□□□□□ -2.23
H3F3AP84243 Z82205.1-201ENST00000428456 297 ntBASIC1.1□□□□□ -2.23
H3F3AP84243 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.1□□□□□ -2.23
H3F3AP84243 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.1□□□□□ -2.23
H3F3AP84243 ELOCP30-201ENST00000447108 299 ntBASIC1.1□□□□□ -2.23
H3F3AP84243 AC112492.4-201ENST00000456549 352 ntBASIC1.1□□□□□ -2.23
H3F3AP84243 AC108729.1-201ENST00000487812 947 ntBASIC1.1□□□□□ -2.23
H3F3AP84243 MTCYBP16-201ENST00000509187 1129 ntBASIC1.1□□□□□ -2.23
H3F3AP84243 RNU6-150P-201ENST00000516237 95 ntBASIC1.1□□□□□ -2.23
H3F3AP84243 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.1□□□□□ -2.23
H3F3AP84243 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.1□□□□□ -2.23
H3F3AP84243 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.1□□□□□ -2.23
H3F3AP84243 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.1□□□□□ -2.23
H3F3AP84243 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.1□□□□□ -2.23
H3F3AP84243 MIR3124-201ENST00000582636 67 ntBASIC1.1□□□□□ -2.23
H3F3AP84243 BNIP3P27-201ENST00000599991 412 ntBASIC1.1□□□□□ -2.23
H3F3AP84243 AC093788.1-201ENST00000609356 927 ntBASIC1.1□□□□□ -2.23
H3F3AP84243 Z82243.1-201ENST00000609432 473 ntBASIC1.1□□□□□ -2.23
H3F3AP84243 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.1□□□□□ -2.23
H3F3AP84243 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
H3F3AP84243 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
H3F3AP84243 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
H3F3AP84243 RNU6-468P-201ENST00000384003 109 ntBASIC1.09□□□□□ -2.23
H3F3AP84243 RNU6-1274P-201ENST00000384557 107 ntBASIC1.09□□□□□ -2.23
H3F3AP84243 RNU1-78P-201ENST00000391248 165 ntBASIC1.09□□□□□ -2.23
H3F3AP84243 RNA5SP100-201ENST00000410903 110 ntBASIC1.09□□□□□ -2.23
H3F3AP84243 RNA5SP59-201ENST00000410922 110 ntBASIC1.09□□□□□ -2.23
H3F3AP84243 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.09□□□□□ -2.23
H3F3AP84243 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.09□□□□□ -2.23
H3F3AP84243 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.09□□□□□ -2.23
H3F3AP84243 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.09□□□□□ -2.23
H3F3AP84243 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.09□□□□□ -2.23
H3F3AP84243 RPL31P58-201ENST00000469001 379 ntBASIC1.09□□□□□ -2.23
H3F3AP84243 AC099513.1-201ENST00000490423 301 ntBASIC1.09□□□□□ -2.23
H3F3AP84243 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.09□□□□□ -2.23
H3F3AP84243 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.09□□□□□ -2.23
H3F3AP84243 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.09□□□□□ -2.23
H3F3AP84243 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.09□□□□□ -2.23
H3F3AP84243 RNU6-572P-201ENST00000516724 80 ntBASIC1.09□□□□□ -2.23
H3F3AP84243 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.09□□□□□ -2.23
H3F3AP84243 COPS8P3-201ENST00000526024 482 ntBASIC1.09□□□□□ -2.23
H3F3AP84243 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.09□□□□□ -2.23
H3F3AP84243 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.09□□□□□ -2.23
H3F3AP84243 AL133153.1-201ENST00000557756 303 ntBASIC1.09□□□□□ -2.23
H3F3AP84243 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.09□□□□□ -2.23
H3F3AP84243 AC002400.1-201ENST00000569310 726 ntBASIC1.09□□□□□ -2.23
H3F3AP84243 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.09□□□□□ -2.23
H3F3AP84243 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.09□□□□□ -2.23
H3F3AP84243 AL132822.1-201ENST00000617063 513 ntBASIC1.09□□□□□ -2.23
H3F3AP84243 AC078880.5-201ENST00000617845 421 ntBASIC1.09□□□□□ -2.23
H3F3AP84243 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.09□□□□□ -2.23
H3F3AP84243 AP003476.1-201ENST00000623984 516 ntBASIC1.09□□□□□ -2.23
H3F3AP84243 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.08□□□□□ -2.24
H3F3AP84243 TEX21P-201ENST00000447107 1476 ntBASIC1.08□□□□□ -2.24
H3F3AP84243 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.08□□□□□ -2.24
H3F3AP84243 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
H3F3AP84243 CBX3P1-201ENST00000325243 554 ntBASIC1.08□□□□□ -2.24
H3F3AP84243 MIR186-201ENST00000384988 86 ntBASIC1.08□□□□□ -2.24
H3F3AP84243 SNORA48.1-201ENST00000390879 135 ntBASIC1.08□□□□□ -2.24
H3F3AP84243 AL359634.1-202ENST00000404721 284 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms