Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 PRRC2CP1-201ENST00000404428 159 ntBASIC0.23□□□□□ -2.37
PRKDCP78527 AL449283.1-202ENST00000418249 604 ntBASIC0.23□□□□□ -2.37
PRKDCP78527 MTND2P24-201ENST00000453434 806 ntBASIC0.23□□□□□ -2.37
PRKDCP78527 UBL5P1-201ENST00000507979 193 ntBASIC0.23□□□□□ -2.37
PRKDCP78527 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.23□□□□□ -2.37
PRKDCP78527 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.23□□□□□ -2.37
PRKDCP78527 AC090115.3-201ENST00000553218 849 ntBASIC0.23□□□□□ -2.37
PRKDCP78527 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.23□□□□□ -2.37
PRKDCP78527 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
PRKDCP78527 TAF9BP2-201ENST00000400856 499 ntBASIC0.23□□□□□ -2.37
PRKDCP78527 OFD1P18Y-201ENST00000420889 959 ntBASIC0.23□□□□□ -2.37
PRKDCP78527 RPL37P21-201ENST00000435890 276 ntBASIC0.23□□□□□ -2.37
PRKDCP78527 AL353706.1-201ENST00000436728 494 ntBASIC0.23□□□□□ -2.37
PRKDCP78527 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.23□□□□□ -2.37
PRKDCP78527 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.23□□□□□ -2.37
PRKDCP78527 AL669831.4-202ENST00000590817 238 ntBASIC0.23□□□□□ -2.37
PRKDCP78527 CLIC4P2-201ENST00000601934 717 ntBASIC0.23□□□□□ -2.37
PRKDCP78527 AC068790.6-201ENST00000602558 258 ntBASIC0.23□□□□□ -2.37
PRKDCP78527 AL606490.4-201ENST00000423117 127 ntBASIC0.22□□□□□ -2.37
PRKDCP78527 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.22□□□□□ -2.37
PRKDCP78527 RPL31P53-201ENST00000457065 348 ntBASIC0.22□□□□□ -2.37
PRKDCP78527 AC034114.1-201ENST00000520293 285 ntBASIC0.22□□□□□ -2.37
PRKDCP78527 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.22□□□□□ -2.37
PRKDCP78527 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC0.22□□□□□ -2.37
PRKDCP78527 XIAPP1-201ENST00000603162 600 ntBASIC0.22□□□□□ -2.37
PRKDCP78527 RNU1-96P-201ENST00000364163 162 ntBASIC0.22□□□□□ -2.37
PRKDCP78527 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.22□□□□□ -2.37
PRKDCP78527 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.22□□□□□ -2.37
PRKDCP78527 MTND5P8-201ENST00000449817 1083 ntBASIC0.22□□□□□ -2.37
PRKDCP78527 AC099513.1-201ENST00000490423 301 ntBASIC0.22□□□□□ -2.37
PRKDCP78527 SNORA4.4-201ENST00000515921 135 ntBASIC0.22□□□□□ -2.37
PRKDCP78527 AC067904.2-201ENST00000517322 1283 ntBASIC0.22□□□□□ -2.37
PRKDCP78527 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.22□□□□□ -2.37
PRKDCP78527 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.22□□□□□ -2.37
PRKDCP78527 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.22□□□□□ -2.37
PRKDCP78527 Y_RNA.757-201ENST00000578934 114 ntBASIC0.22□□□□□ -2.37
PRKDCP78527 AC105224.1-201ENST00000587055 421 ntBASIC0.22□□□□□ -2.37
PRKDCP78527 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.22□□□□□ -2.37
PRKDCP78527 AC138393.1-203ENST00000327086 343 ntBASIC0.22□□□□□ -2.37
PRKDCP78527 Y_RNA.476-201ENST00000384347 108 ntBASIC0.22□□□□□ -2.37
PRKDCP78527 HMGN2P39-201ENST00000398005 273 ntBASIC0.22□□□□□ -2.37
PRKDCP78527 AC114737.2-201ENST00000421583 173 ntBASIC0.22□□□□□ -2.37
PRKDCP78527 NDUFB4P7-201ENST00000423198 363 ntBASIC0.22□□□□□ -2.37
PRKDCP78527 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.22□□□□□ -2.37
PRKDCP78527 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.22□□□□□ -2.37
PRKDCP78527 HMGN1P13-201ENST00000505795 138 ntBASIC0.22□□□□□ -2.37
PRKDCP78527 PSMC1P5-201ENST00000512850 177 ntBASIC0.22□□□□□ -2.37
PRKDCP78527 RNU6-322P-201ENST00000516010 103 ntBASIC0.22□□□□□ -2.37
PRKDCP78527 AC006199.1-201ENST00000548728 219 ntBASIC0.22□□□□□ -2.37
PRKDCP78527 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
PRKDCP78527 AC134026.1-201ENST00000623249 2239 ntBASIC0.21□□□□□ -2.38
PRKDCP78527 SNORA29-201ENST00000384183 140 ntBASIC0.21□□□□□ -2.38
PRKDCP78527 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.21□□□□□ -2.38
PRKDCP78527 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.21□□□□□ -2.38
PRKDCP78527 AL592447.1-201ENST00000447592 540 ntBASIC0.21□□□□□ -2.38
PRKDCP78527 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
PRKDCP78527 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.21□□□□□ -2.38
PRKDCP78527 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.21□□□□□ -2.38
PRKDCP78527 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.21□□□□□ -2.38
PRKDCP78527 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.21□□□□□ -2.38
PRKDCP78527 uc_338.14-201ENST00000613162 166 ntBASIC0.21□□□□□ -2.38
PRKDCP78527 AC091965.5-201ENST00000624785 342 ntBASIC0.21□□□□□ -2.38
PRKDCP78527 RNU6-39P-201ENST00000384344 107 ntBASIC0.21□□□□□ -2.38
PRKDCP78527 RNU2-36P-201ENST00000410361 191 ntBASIC0.21□□□□□ -2.38
PRKDCP78527 RNU6-712P-201ENST00000410558 100 ntBASIC0.21□□□□□ -2.38
PRKDCP78527 AC092573.2-201ENST00000434546 243 ntBASIC0.21□□□□□ -2.38
PRKDCP78527 MTCO2P20-201ENST00000437339 673 ntBASIC0.21□□□□□ -2.38
PRKDCP78527 AL135790.2-201ENST00000437701 267 ntBASIC0.21□□□□□ -2.38
PRKDCP78527 ZNF705CP-201ENST00000530515 889 ntBASIC0.21□□□□□ -2.38
PRKDCP78527 AL589743.7-201ENST00000612637 233 ntBASIC0.21□□□□□ -2.38
PRKDCP78527 ZNF663P-202ENST00000641770 1131 ntBASIC0.21□□□□□ -2.38
PRKDCP78527 RNU6-339P-201ENST00000384310 107 ntBASIC0.21□□□□□ -2.38
PRKDCP78527 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.21□□□□□ -2.38
PRKDCP78527 snoU13.9-201ENST00000458927 103 ntBASIC0.21□□□□□ -2.38
PRKDCP78527 RPL21P47-201ENST00000483696 477 ntBASIC0.21□□□□□ -2.38
PRKDCP78527 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.21□□□□□ -2.38
PRKDCP78527 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.21□□□□□ -2.38
PRKDCP78527 RNU6-1308P-201ENST00000516817 103 ntBASIC0.21□□□□□ -2.38
PRKDCP78527 AC107953.1-201ENST00000522216 297 ntBASIC0.21□□□□□ -2.38
PRKDCP78527 AC007834.2-201ENST00000536310 343 ntBASIC0.21□□□□□ -2.38
PRKDCP78527 AC009509.4-201ENST00000619202 509 ntBASIC0.21□□□□□ -2.38
PRKDCP78527 MIR6516-201ENST00000630554 81 ntBASIC0.21□□□□□ -2.38
PRKDCP78527 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.21□□□□□ -2.38
PRKDCP78527 RNU4-73P-201ENST00000363164 141 ntBASIC0.2□□□□□ -2.38
PRKDCP78527 RNU6-271P-201ENST00000363858 105 ntBASIC0.2□□□□□ -2.38
PRKDCP78527 U8.7-201ENST00000364940 136 ntBASIC0.2□□□□□ -2.38
PRKDCP78527 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
PRKDCP78527 AC097463.2-201ENST00000421074 142 ntBASIC0.2□□□□□ -2.38
PRKDCP78527 AL590383.1-201ENST00000428602 75 ntBASIC0.2□□□□□ -2.38
PRKDCP78527 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC0.2□□□□□ -2.38
PRKDCP78527 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.2□□□□□ -2.38
PRKDCP78527 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.2□□□□□ -2.38
PRKDCP78527 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.2□□□□□ -2.38
PRKDCP78527 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.2□□□□□ -2.38
PRKDCP78527 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.2□□□□□ -2.38
PRKDCP78527 SNORD115-3-201ENST00000363100 82 ntBASIC0.2□□□□□ -2.38
PRKDCP78527 RNU6-833P-201ENST00000363486 107 ntBASIC0.2□□□□□ -2.38
PRKDCP78527 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.2□□□□□ -2.38
PRKDCP78527 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.2□□□□□ -2.38
PRKDCP78527 GTF2IP13-201ENST00000438487 386 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms