Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
TPM4P67936 AL603865.2-201ENST00000401679 213 ntBASIC1.36□□□□□ -2.19
TPM4P67936 AC138623.1-201ENST00000418060 216 ntBASIC1.36□□□□□ -2.19
TPM4P67936 TIMM9P2-201ENST00000419324 266 ntBASIC1.36□□□□□ -2.19
TPM4P67936 CYCSP49-201ENST00000420810 319 ntBASIC1.36□□□□□ -2.19
TPM4P67936 AL592045.1-201ENST00000429867 352 ntBASIC1.36□□□□□ -2.19
TPM4P67936 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.36□□□□□ -2.19
TPM4P67936 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.36□□□□□ -2.19
TPM4P67936 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.36□□□□□ -2.19
TPM4P67936 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.36□□□□□ -2.19
TPM4P67936 AC117532.1-201ENST00000514638 323 ntBASIC1.36□□□□□ -2.19
TPM4P67936 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.36□□□□□ -2.19
TPM4P67936 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.36□□□□□ -2.19
TPM4P67936 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.36□□□□□ -2.19
TPM4P67936 FARSBP1-201ENST00000435808 1778 ntBASIC1.35□□□□□ -2.19
TPM4P67936 RNU6-289P-201ENST00000364093 107 ntBASIC1.35□□□□□ -2.19
TPM4P67936 MIR19A-201ENST00000384878 82 ntBASIC1.35□□□□□ -2.19
TPM4P67936 SNORA40.6-201ENST00000391153 128 ntBASIC1.35□□□□□ -2.19
TPM4P67936 MTCO1P56-201ENST00000401674 224 ntBASIC1.35□□□□□ -2.19
TPM4P67936 MIR1285-1-201ENST00000408593 84 ntBASIC1.35□□□□□ -2.19
TPM4P67936 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.35□□□□□ -2.19
TPM4P67936 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.35□□□□□ -2.19
TPM4P67936 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.35□□□□□ -2.19
TPM4P67936 HMGB1P31-201ENST00000437242 427 ntBASIC1.35□□□□□ -2.19
TPM4P67936 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.35□□□□□ -2.19
TPM4P67936 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.35□□□□□ -2.19
TPM4P67936 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.35□□□□□ -2.19
TPM4P67936 snoU13.9-201ENST00000458927 103 ntBASIC1.35□□□□□ -2.19
TPM4P67936 RNVU1-2-201ENST00000516326 135 ntBASIC1.35□□□□□ -2.19
TPM4P67936 RNU6-143P-201ENST00000516942 93 ntBASIC1.35□□□□□ -2.19
TPM4P67936 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.35□□□□□ -2.19
TPM4P67936 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.35□□□□□ -2.19
TPM4P67936 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.35□□□□□ -2.19
TPM4P67936 AC012360.2-201ENST00000609349 391 ntBASIC1.35□□□□□ -2.19
TPM4P67936 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.35□□□□□ -2.19
TPM4P67936 AC112204.3-201ENST00000623822 332 ntBASIC1.35□□□□□ -2.19
TPM4P67936 AC090517.3-201ENST00000625170 141 ntBASIC1.35□□□□□ -2.19
TPM4P67936 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.34□□□□□ -2.19
TPM4P67936 RNU5B-4P-201ENST00000363508 111 ntBASIC1.34□□□□□ -2.19
TPM4P67936 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
TPM4P67936 RNU6-14P-201ENST00000384630 106 ntBASIC1.34□□□□□ -2.19
TPM4P67936 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.34□□□□□ -2.19
TPM4P67936 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.34□□□□□ -2.19
TPM4P67936 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.34□□□□□ -2.19
TPM4P67936 SNRPEP7-201ENST00000438350 220 ntBASIC1.34□□□□□ -2.19
TPM4P67936 RPL32P28-201ENST00000443577 397 ntBASIC1.34□□□□□ -2.19
TPM4P67936 AC245517.4-201ENST00000448601 281 ntBASIC1.34□□□□□ -2.19
TPM4P67936 AC004223.1-201ENST00000479840 271 ntBASIC1.34□□□□□ -2.19
TPM4P67936 RPL39P36-201ENST00000490784 156 ntBASIC1.34□□□□□ -2.19
TPM4P67936 AC025465.3-201ENST00000510570 311 ntBASIC1.34□□□□□ -2.19
TPM4P67936 SNORA31.19-201ENST00000517079 126 ntBASIC1.34□□□□□ -2.19
TPM4P67936 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TPM4P67936 AP006587.4-201ENST00000526053 529 ntBASIC1.34□□□□□ -2.19
TPM4P67936 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.34□□□□□ -2.19
TPM4P67936 MIR4293-201ENST00000584305 78 ntBASIC1.34□□□□□ -2.19
TPM4P67936 AP001981.2-201ENST00000603241 418 ntBASIC1.34□□□□□ -2.19
TPM4P67936 uc_338.15-201ENST00000615470 191 ntBASIC1.34□□□□□ -2.19
TPM4P67936 PCMTD1P7-201ENST00000634506 357 ntBASIC1.34□□□□□ -2.19
TPM4P67936 AC006927.2-201ENST00000639256 389 ntBASIC1.34□□□□□ -2.19
TPM4P67936 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
TPM4P67936 RNU6-1284P-201ENST00000363701 100 ntBASIC1.33□□□□□ -2.2
TPM4P67936 RNU6-853P-201ENST00000364306 107 ntBASIC1.33□□□□□ -2.2
TPM4P67936 snoZ40.1-201ENST00000364540 72 ntBASIC1.33□□□□□ -2.2
TPM4P67936 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.33□□□□□ -2.2
TPM4P67936 AL591704.2-201ENST00000421658 181 ntBASIC1.33□□□□□ -2.2
TPM4P67936 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.33□□□□□ -2.2
TPM4P67936 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.33□□□□□ -2.2
TPM4P67936 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.33□□□□□ -2.2
TPM4P67936 AL078601.1-201ENST00000444542 271 ntBASIC1.33□□□□□ -2.2
TPM4P67936 RPS3AP22-201ENST00000488297 769 ntBASIC1.33□□□□□ -2.2
TPM4P67936 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.33□□□□□ -2.2
TPM4P67936 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.33□□□□□ -2.2
TPM4P67936 RNA5SP445-201ENST00000515889 115 ntBASIC1.33□□□□□ -2.2
TPM4P67936 RNU6-64P-201ENST00000517119 105 ntBASIC1.33□□□□□ -2.2
TPM4P67936 RNU6-902P-201ENST00000517212 91 ntBASIC1.33□□□□□ -2.2
TPM4P67936 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.33□□□□□ -2.2
TPM4P67936 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.33□□□□□ -2.2
TPM4P67936 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.33□□□□□ -2.2
TPM4P67936 AL512347.1-201ENST00000566420 503 ntBASIC1.33□□□□□ -2.2
TPM4P67936 BNIP3P9-201ENST00000603714 553 ntBASIC1.33□□□□□ -2.2
TPM4P67936 RPL21P136-201ENST00000605378 396 ntBASIC1.33□□□□□ -2.2
TPM4P67936 AC097468.3-201ENST00000607956 456 ntBASIC1.33□□□□□ -2.2
TPM4P67936 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
TPM4P67936 AC009269.6-201ENST00000621778 588 ntBASIC1.33□□□□□ -2.2
TPM4P67936 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
TPM4P67936 DDX43P2-201ENST00000604753 1354 ntBASIC1.33□□□□□ -2.2
TPM4P67936 AC092125.1-201ENST00000562568 1995 ntBASIC1.32□□□□□ -2.2
TPM4P67936 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
TPM4P67936 Y_RNA.99-201ENST00000363138 105 ntBASIC1.32□□□□□ -2.2
TPM4P67936 RNU6-529P-201ENST00000363383 104 ntBASIC1.32□□□□□ -2.2
TPM4P67936 SNORA40C-201ENST00000391285 128 ntBASIC1.32□□□□□ -2.2
TPM4P67936 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.32□□□□□ -2.2
TPM4P67936 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.32□□□□□ -2.2
TPM4P67936 AL953862.1-201ENST00000423016 168 ntBASIC1.32□□□□□ -2.2
TPM4P67936 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.32□□□□□ -2.2
TPM4P67936 USP9YP18-201ENST00000425912 695 ntBASIC1.32□□□□□ -2.2
TPM4P67936 MTCO1P44-201ENST00000441935 243 ntBASIC1.32□□□□□ -2.2
TPM4P67936 MED28P2-201ENST00000475771 317 ntBASIC1.32□□□□□ -2.2
TPM4P67936 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC1.32□□□□□ -2.2
TPM4P67936 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms