Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC-0.46□□□□□ -2.48
RPL39P62891 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC-0.46□□□□□ -2.48
RPL39P62891 SNORA70.16-201ENST00000516390 95 ntBASIC-0.46□□□□□ -2.48
RPL39P62891 AL121579.1-201ENST00000555129 305 ntBASIC-0.46□□□□□ -2.48
RPL39P62891 PSMA3P-201ENST00000555485 635 ntBASIC-0.46□□□□□ -2.48
RPL39P62891 PCNAP1-202ENST00000595299 752 ntBASIC-0.46□□□□□ -2.48
RPL39P62891 MIR8087-201ENST00000612745 78 ntBASIC-0.46□□□□□ -2.48
RPL39P62891 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.46□□□□□ -2.48
RPL39P62891 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.46□□□□□ -2.48
RPL39P62891 Y_RNA.124-201ENST00000363339 93 ntBASIC-0.47□□□□□ -2.48
RPL39P62891 RNY1-201ENST00000364228 113 ntBASIC-0.47□□□□□ -2.48
RPL39P62891 Y_RNA.226-201ENST00000364337 114 ntBASIC-0.47□□□□□ -2.48
RPL39P62891 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC-0.47□□□□□ -2.48
RPL39P62891 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC-0.47□□□□□ -2.48
RPL39P62891 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.47□□□□□ -2.48
RPL39P62891 AC016065.2-201ENST00000514530 444 ntBASIC-0.47□□□□□ -2.48
RPL39P62891 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.47□□□□□ -2.48
RPL39P62891 AC060771.1-201ENST00000582031 164 ntBASIC-0.47□□□□□ -2.48
RPL39P62891 AC243773.3-201ENST00000613270 256 ntBASIC-0.47□□□□□ -2.48
RPL39P62891 AL357075.2-201ENST00000614906 189 ntBASIC-0.47□□□□□ -2.48
RPL39P62891 AC090517.2-201ENST00000614966 680 ntBASIC-0.47□□□□□ -2.48
RPL39P62891 AC024581.2-201ENST00000619986 252 ntBASIC-0.47□□□□□ -2.48
RPL39P62891 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.47□□□□□ -2.49
RPL39P62891 AC092125.1-201ENST00000562568 1995 ntBASIC-0.48□□□□□ -2.49
RPL39P62891 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC-0.48□□□□□ -2.49
RPL39P62891 RNU6-263P-201ENST00000363811 107 ntBASIC-0.48□□□□□ -2.49
RPL39P62891 RNU6-670P-201ENST00000364312 104 ntBASIC-0.48□□□□□ -2.49
RPL39P62891 SNORA25B-201ENST00000365507 128 ntBASIC-0.48□□□□□ -2.49
RPL39P62891 RNU11-3P-201ENST00000391111 133 ntBASIC-0.48□□□□□ -2.49
RPL39P62891 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.48□□□□□ -2.49
RPL39P62891 AC063976.4-201ENST00000421971 163 ntBASIC-0.48□□□□□ -2.49
RPL39P62891 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC-0.48□□□□□ -2.49
RPL39P62891 RAC1P8-201ENST00000427086 527 ntBASIC-0.48□□□□□ -2.49
RPL39P62891 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC-0.48□□□□□ -2.49
RPL39P62891 AC233266.1-201ENST00000454518 96 ntBASIC-0.48□□□□□ -2.49
RPL39P62891 snoU13.7-201ENST00000459220 104 ntBASIC-0.48□□□□□ -2.49
RPL39P62891 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC-0.48□□□□□ -2.49
RPL39P62891 AC092436.3-201ENST00000511788 257 ntBASIC-0.48□□□□□ -2.49
RPL39P62891 AC011406.1-201ENST00000512440 370 ntBASIC-0.48□□□□□ -2.49
RPL39P62891 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC-0.48□□□□□ -2.49
RPL39P62891 ARL2BPP5-201ENST00000523141 481 ntBASIC-0.48□□□□□ -2.49
RPL39P62891 AP003049.1-201ENST00000529418 457 ntBASIC-0.48□□□□□ -2.49
RPL39P62891 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.48□□□□□ -2.49
RPL39P62891 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC-0.48□□□□□ -2.49
RPL39P62891 AC068790.6-201ENST00000602558 258 ntBASIC-0.48□□□□□ -2.49
RPL39P62891 AL121652.1-201ENST00000608851 448 ntBASIC-0.48□□□□□ -2.49
RPL39P62891 AC242852.1-201ENST00000612151 96 ntBASIC-0.48□□□□□ -2.49
RPL39P62891 uc_338.34-201ENST00000617467 174 ntBASIC-0.48□□□□□ -2.49
RPL39P62891 AC244015.1-201ENST00000622301 99 ntBASIC-0.48□□□□□ -2.49
RPL39P62891 AL138955.1-201ENST00000622881 1040 ntBASIC-0.48□□□□□ -2.49
RPL39P62891 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC-0.49□□□□□ -2.49
RPL39P62891 RNA5SP258-201ENST00000362750 119 ntBASIC-0.49□□□□□ -2.49
RPL39P62891 MIR518E-201ENST00000385252 88 ntBASIC-0.49□□□□□ -2.49
RPL39P62891 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.49□□□□□ -2.49
RPL39P62891 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC-0.49□□□□□ -2.49
RPL39P62891 AC010587.2-201ENST00000511727 448 ntBASIC-0.49□□□□□ -2.49
RPL39P62891 SNORA31.17-201ENST00000516953 127 ntBASIC-0.49□□□□□ -2.49
RPL39P62891 HSPA8P13-201ENST00000523715 472 ntBASIC-0.49□□□□□ -2.49
RPL39P62891 HAUS1P3-201ENST00000523909 662 ntBASIC-0.49□□□□□ -2.49
RPL39P62891 NDUFA5P6-201ENST00000542110 379 ntBASIC-0.49□□□□□ -2.49
RPL39P62891 CR383656.8-201ENST00000549046 145 ntBASIC-0.49□□□□□ -2.49
RPL39P62891 MIR1273G-201ENST00000577677 100 ntBASIC-0.49□□□□□ -2.49
RPL39P62891 SNRPGP17-201ENST00000603780 214 ntBASIC-0.49□□□□□ -2.49
RPL39P62891 AC009237.15-201ENST00000610252 501 ntBASIC-0.49□□□□□ -2.49
RPL39P62891 AL353149.1-201ENST00000610667 244 ntBASIC-0.49□□□□□ -2.49
RPL39P62891 AC067863.3-201ENST00000624172 122 ntBASIC-0.49□□□□□ -2.49
RPL39P62891 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.5□□□□□ -2.49
RPL39P62891 RNA5SP214-201ENST00000363378 118 ntBASIC-0.5□□□□□ -2.49
RPL39P62891 RNA5SP240-201ENST00000365355 128 ntBASIC-0.5□□□□□ -2.49
RPL39P62891 RNU6-716P-201ENST00000365621 103 ntBASIC-0.5□□□□□ -2.49
RPL39P62891 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC-0.5□□□□□ -2.49
RPL39P62891 RNA5SP56-201ENST00000410277 118 ntBASIC-0.5□□□□□ -2.49
RPL39P62891 RPL26P27-201ENST00000414397 437 ntBASIC-0.5□□□□□ -2.49
RPL39P62891 AL353777.1-201ENST00000425552 326 ntBASIC-0.5□□□□□ -2.49
RPL39P62891 AC243964.1-201ENST00000441814 261 ntBASIC-0.5□□□□□ -2.49
RPL39P62891 OR2AQ1P-201ENST00000451972 200 ntBASIC-0.5□□□□□ -2.49
RPL39P62891 AC113410.1-201ENST00000505029 247 ntBASIC-0.5□□□□□ -2.49
RPL39P62891 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.5□□□□□ -2.49
RPL39P62891 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC-0.5□□□□□ -2.49
RPL39P62891 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC-0.5□□□□□ -2.49
RPL39P62891 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC-0.5□□□□□ -2.49
RPL39P62891 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.5□□□□□ -2.49
RPL39P62891 BNIP3P27-201ENST00000599991 412 ntBASIC-0.5□□□□□ -2.49
RPL39P62891 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC-0.5□□□□□ -2.49
RPL39P62891 AL589743.7-201ENST00000612637 233 ntBASIC-0.5□□□□□ -2.49
RPL39P62891 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC-0.5□□□□□ -2.49
RPL39P62891 Y_RNA.122-201ENST00000363331 96 ntBASIC-0.51□□□□□ -2.49
RPL39P62891 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.51□□□□□ -2.49
RPL39P62891 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC-0.51□□□□□ -2.49
RPL39P62891 RNA5SP219-201ENST00000390940 113 ntBASIC-0.51□□□□□ -2.49
RPL39P62891 MIR942-201ENST00000401111 86 ntBASIC-0.51□□□□□ -2.49
RPL39P62891 STAT4-203ENST00000409995 709 ntTSL 5 BASIC-0.51□□□□□ -2.49
RPL39P62891 RNU4-78P-201ENST00000410940 126 ntBASIC-0.51□□□□□ -2.49
RPL39P62891 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.51□□□□□ -2.49
RPL39P62891 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.51□□□□□ -2.49
RPL39P62891 RAB11AP1-201ENST00000442978 646 ntBASIC-0.51□□□□□ -2.49
RPL39P62891 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.51□□□□□ -2.49
RPL39P62891 MTND5P30-201ENST00000452896 1731 ntBASIC-0.51□□□□□ -2.49
RPL39P62891 AC005741.1-201ENST00000511094 432 ntBASIC-0.51□□□□□ -2.49
RPL39P62891 Y_RNA.676-201ENST00000516393 96 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms