Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AC008725.1-201ENST00000605123 2263 ntBASIC4□□□□□ -1.77
HERVK_113P62684 SNORA31-201ENST00000362607 130 ntBASIC4□□□□□ -1.77
HERVK_113P62684 RNA5SP374-201ENST00000362939 125 ntBASIC4□□□□□ -1.77
HERVK_113P62684 RNU6-490P-201ENST00000362985 107 ntBASIC4□□□□□ -1.77
HERVK_113P62684 Y_RNA.245-201ENST00000364493 95 ntBASIC4□□□□□ -1.77
HERVK_113P62684 RNU6-790P-201ENST00000384479 105 ntBASIC4□□□□□ -1.77
HERVK_113P62684 MIR607-201ENST00000385241 96 ntBASIC4□□□□□ -1.77
HERVK_113P62684 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4□□□□□ -1.77
HERVK_113P62684 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4□□□□□ -1.77
HERVK_113P62684 RPS24P13-201ENST00000442520 397 ntBASIC4□□□□□ -1.77
HERVK_113P62684 FTH1P25-201ENST00000447665 469 ntBASIC4□□□□□ -1.77
HERVK_113P62684 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4□□□□□ -1.77
HERVK_113P62684 BTF3P15-201ENST00000455606 336 ntBASIC4□□□□□ -1.77
HERVK_113P62684 RPL21P13-201ENST00000488305 481 ntBASIC4□□□□□ -1.77
HERVK_113P62684 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4□□□□□ -1.77
HERVK_113P62684 RNA5SP309-201ENST00000516670 106 ntBASIC4□□□□□ -1.77
HERVK_113P62684 RNU6-307P-201ENST00000516743 106 ntBASIC4□□□□□ -1.77
HERVK_113P62684 RNA5SP290-201ENST00000517133 127 ntBASIC4□□□□□ -1.77
HERVK_113P62684 RNU6-264P-201ENST00000517134 104 ntBASIC4□□□□□ -1.77
HERVK_113P62684 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HERVK_113P62684 OR5D17P-201ENST00000531492 978 ntBASIC4□□□□□ -1.77
HERVK_113P62684 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4□□□□□ -1.77
HERVK_113P62684 AC109446.1-201ENST00000566172 220 ntBASIC4□□□□□ -1.77
HERVK_113P62684 MIR3671-201ENST00000580455 88 ntBASIC4□□□□□ -1.77
HERVK_113P62684 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4□□□□□ -1.77
HERVK_113P62684 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4□□□□□ -1.77
HERVK_113P62684 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4□□□□□ -1.77
HERVK_113P62684 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
HERVK_113P62684 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HERVK_113P62684 CEP170P1-201ENST00000502249 4587 ntBASIC4□□□□□ -1.77
HERVK_113P62684 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4□□□□□ -1.77
HERVK_113P62684 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4□□□□□ -1.77
HERVK_113P62684 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4□□□□□ -1.77
HERVK_113P62684 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HERVK_113P62684 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HERVK_113P62684 Y_RNA.158-201ENST00000363651 101 ntBASIC3.99□□□□□ -1.77
HERVK_113P62684 Y_RNA.252-201ENST00000364556 101 ntBASIC3.99□□□□□ -1.77
HERVK_113P62684 RNY1P14-201ENST00000384426 108 ntBASIC3.99□□□□□ -1.77
HERVK_113P62684 U3.39-201ENST00000408569 239 ntBASIC3.99□□□□□ -1.77
HERVK_113P62684 MIR1290-201ENST00000408735 78 ntBASIC3.99□□□□□ -1.77
HERVK_113P62684 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.99□□□□□ -1.77
HERVK_113P62684 UBE2D3P2-201ENST00000424409 445 ntBASIC3.99□□□□□ -1.77
HERVK_113P62684 AL358176.2-201ENST00000425769 204 ntBASIC3.99□□□□□ -1.77
HERVK_113P62684 Z75741.1-201ENST00000446793 314 ntBASIC3.99□□□□□ -1.77
HERVK_113P62684 GSTA11P-201ENST00000452866 669 ntBASIC3.99□□□□□ -1.77
HERVK_113P62684 AP001486.1-201ENST00000463339 476 ntBASIC3.99□□□□□ -1.77
HERVK_113P62684 AC008571.1-201ENST00000467232 300 ntBASIC3.99□□□□□ -1.77
HERVK_113P62684 RPS20P22-201ENST00000473700 357 ntBASIC3.99□□□□□ -1.77
HERVK_113P62684 AL135752.1-201ENST00000479477 471 ntBASIC3.99□□□□□ -1.77
HERVK_113P62684 RPL31P13-201ENST00000484151 370 ntBASIC3.99□□□□□ -1.77
HERVK_113P62684 AL160314.1-201ENST00000490836 438 ntBASIC3.99□□□□□ -1.77
HERVK_113P62684 SNORA31.8-201ENST00000516327 108 ntBASIC3.99□□□□□ -1.77
HERVK_113P62684 AC004024.1-201ENST00000549244 247 ntBASIC3.99□□□□□ -1.77
HERVK_113P62684 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.99□□□□□ -1.77
HERVK_113P62684 MIR4325-201ENST00000583049 90 ntBASIC3.99□□□□□ -1.77
HERVK_113P62684 AC123912.5-201ENST00000605470 343 ntBASIC3.99□□□□□ -1.77
HERVK_113P62684 AL121655.1-201ENST00000605811 308 ntBASIC3.99□□□□□ -1.77
HERVK_113P62684 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.99□□□□□ -1.77
HERVK_113P62684 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HERVK_113P62684 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HERVK_113P62684 AL356274.2-201ENST00000624379 3752 ntBASIC3.98□□□□□ -1.77
HERVK_113P62684 CDC27P3-201ENST00000635418 1910 ntBASIC3.98□□□□□ -1.77
HERVK_113P62684 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.98□□□□□ -1.77
HERVK_113P62684 Y_RNA.133-201ENST00000363428 110 ntBASIC3.98□□□□□ -1.77
HERVK_113P62684 RNA5SP42-201ENST00000364278 115 ntBASIC3.98□□□□□ -1.77
HERVK_113P62684 Y_RNA.428-201ENST00000384078 102 ntBASIC3.98□□□□□ -1.77
HERVK_113P62684 RNU6-574P-201ENST00000384265 107 ntBASIC3.98□□□□□ -1.77
HERVK_113P62684 RNU6-842P-201ENST00000384269 107 ntBASIC3.98□□□□□ -1.77
HERVK_113P62684 RNU6-463P-201ENST00000384340 107 ntBASIC3.98□□□□□ -1.77
HERVK_113P62684 Y_RNA.527-201ENST00000384573 102 ntBASIC3.98□□□□□ -1.77
HERVK_113P62684 Z85995.1-201ENST00000415547 335 ntBASIC3.98□□□□□ -1.77
HERVK_113P62684 RPL21P66-201ENST00000426566 466 ntBASIC3.98□□□□□ -1.77
HERVK_113P62684 PIGFP3-201ENST00000441918 722 ntBASIC3.98□□□□□ -1.77
HERVK_113P62684 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.98□□□□□ -1.77
HERVK_113P62684 FCF1P8-201ENST00000510322 597 ntBASIC3.98□□□□□ -1.77
HERVK_113P62684 SNORD116.3-201ENST00000517176 78 ntBASIC3.98□□□□□ -1.77
HERVK_113P62684 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.98□□□□□ -1.77
HERVK_113P62684 AP003122.3-201ENST00000526316 255 ntBASIC3.98□□□□□ -1.77
HERVK_113P62684 ATP5F1P5-201ENST00000526403 760 ntBASIC3.98□□□□□ -1.77
HERVK_113P62684 AC084851.1-201ENST00000529105 249 ntBASIC3.98□□□□□ -1.77
HERVK_113P62684 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.98□□□□□ -1.77
HERVK_113P62684 AC005899.2-201ENST00000584353 90 ntBASIC3.98□□□□□ -1.77
HERVK_113P62684 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.98□□□□□ -1.77
HERVK_113P62684 RNVU1-4-201ENST00000612985 164 ntBASIC3.98□□□□□ -1.77
HERVK_113P62684 AL132822.1-201ENST00000617063 513 ntBASIC3.98□□□□□ -1.77
HERVK_113P62684 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.98□□□□□ -1.77
HERVK_113P62684 7SK.10-201ENST00000621414 298 ntBASIC3.98□□□□□ -1.77
HERVK_113P62684 SCARNA15.3-201ENST00000626315 122 ntBASIC3.98□□□□□ -1.77
HERVK_113P62684 SCARNA4.1-201ENST00000628597 123 ntBASIC3.98□□□□□ -1.77
HERVK_113P62684 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
HERVK_113P62684 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HERVK_113P62684 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HERVK_113P62684 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.98□□□□□ -1.77
HERVK_113P62684 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.98□□□□□ -1.77
HERVK_113P62684 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HERVK_113P62684 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.97□□□□□ -1.77
HERVK_113P62684 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HERVK_113P62684 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.97□□□□□ -1.77
HERVK_113P62684 Z83843.1-201ENST00000604070 3685 ntBASIC3.97□□□□□ -1.77
HERVK_113P62684 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms