Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.15□□□□□ -2.23
LSM6P62312 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.15□□□□□ -2.23
LSM6P62312 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
LSM6P62312 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
LSM6P62312 RNU6-898P-201ENST00000365627 104 ntBASIC1.14□□□□□ -2.23
LSM6P62312 AL359634.1-202ENST00000404721 284 ntBASIC1.14□□□□□ -2.23
LSM6P62312 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.14□□□□□ -2.23
LSM6P62312 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.14□□□□□ -2.23
LSM6P62312 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.14□□□□□ -2.23
LSM6P62312 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.14□□□□□ -2.23
LSM6P62312 CR769776.1-201ENST00000441254 787 ntBASIC1.14□□□□□ -2.23
LSM6P62312 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.14□□□□□ -2.23
LSM6P62312 MTND1P31-201ENST00000449206 961 ntBASIC1.14□□□□□ -2.23
LSM6P62312 MTND2P3-201ENST00000452458 470 ntBASIC1.14□□□□□ -2.23
LSM6P62312 AC024589.1-201ENST00000512207 263 ntBASIC1.14□□□□□ -2.23
LSM6P62312 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.14□□□□□ -2.23
LSM6P62312 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.14□□□□□ -2.23
LSM6P62312 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.14□□□□□ -2.23
LSM6P62312 AP003033.1-201ENST00000527244 415 ntBASIC1.14□□□□□ -2.23
LSM6P62312 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.14□□□□□ -2.23
LSM6P62312 AC068338.1-201ENST00000565567 176 ntBASIC1.14□□□□□ -2.23
LSM6P62312 AC126365.2-201ENST00000580630 379 ntBASIC1.14□□□□□ -2.23
LSM6P62312 AC090970.3-201ENST00000612566 866 ntBASIC1.14□□□□□ -2.23
LSM6P62312 AC021755.4-201ENST00000616620 456 ntBASIC1.14□□□□□ -2.23
LSM6P62312 MIR7843-201ENST00000622274 79 ntBASIC1.14□□□□□ -2.23
LSM6P62312 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
LSM6P62312 MIR186-201ENST00000384988 86 ntBASIC1.13□□□□□ -2.23
LSM6P62312 RNA5SP213-201ENST00000391031 106 ntBASIC1.13□□□□□ -2.23
LSM6P62312 MRPS36P1-201ENST00000421291 307 ntBASIC1.13□□□□□ -2.23
LSM6P62312 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.13□□□□□ -2.23
LSM6P62312 AP000949.1-201ENST00000438328 629 ntBASIC1.13□□□□□ -2.23
LSM6P62312 PTENP1-201ENST00000447117 1215 ntBASIC1.13□□□□□ -2.23
LSM6P62312 AL353718.1-201ENST00000451028 517 ntBASIC1.13□□□□□ -2.23
LSM6P62312 AC012308.1-201ENST00000451232 178 ntBASIC1.13□□□□□ -2.23
LSM6P62312 RN7SKP210-201ENST00000459176 261 ntBASIC1.13□□□□□ -2.23
LSM6P62312 AC005908.1-201ENST00000468701 347 ntBASIC1.13□□□□□ -2.23
LSM6P62312 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.13□□□□□ -2.23
LSM6P62312 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.13□□□□□ -2.23
LSM6P62312 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.13□□□□□ -2.23
LSM6P62312 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.13□□□□□ -2.23
LSM6P62312 AC104417.1-201ENST00000523974 751 ntBASIC1.13□□□□□ -2.23
LSM6P62312 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.13□□□□□ -2.23
LSM6P62312 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.13□□□□□ -2.23
LSM6P62312 TRAV32-201ENST00000553993 340 ntBASIC1.13□□□□□ -2.23
LSM6P62312 AL133153.1-201ENST00000557756 303 ntBASIC1.13□□□□□ -2.23
LSM6P62312 AL731537.2-201ENST00000561565 951 ntBASIC1.13□□□□□ -2.23
LSM6P62312 AC002400.1-201ENST00000569310 726 ntBASIC1.13□□□□□ -2.23
LSM6P62312 MTATP6P25-201ENST00000574491 261 ntBASIC1.13□□□□□ -2.23
LSM6P62312 MIR4421-201ENST00000578133 69 ntBASIC1.13□□□□□ -2.23
LSM6P62312 MIR3660-201ENST00000584845 100 ntBASIC1.13□□□□□ -2.23
LSM6P62312 AP001981.2-201ENST00000603241 418 ntBASIC1.13□□□□□ -2.23
LSM6P62312 AL355802.3-201ENST00000607571 545 ntBASIC1.13□□□□□ -2.23
LSM6P62312 uc_338.15-201ENST00000615470 191 ntBASIC1.13□□□□□ -2.23
LSM6P62312 AL121890.5-201ENST00000620848 304 ntBASIC1.13□□□□□ -2.23
LSM6P62312 AP000676.3-201ENST00000623299 569 ntBASIC1.13□□□□□ -2.23
LSM6P62312 Y_RNA.99-201ENST00000363138 105 ntBASIC1.12□□□□□ -2.23
LSM6P62312 RNU6-744P-201ENST00000365557 107 ntBASIC1.12□□□□□ -2.23
LSM6P62312 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
LSM6P62312 RNU6-1316P-201ENST00000384242 108 ntBASIC1.12□□□□□ -2.23
LSM6P62312 SNORA40.6-201ENST00000391153 128 ntBASIC1.12□□□□□ -2.23
LSM6P62312 SNORA17.3-201ENST00000391159 129 ntBASIC1.12□□□□□ -2.23
LSM6P62312 SNORA11.2-201ENST00000408318 127 ntBASIC1.12□□□□□ -2.23
LSM6P62312 RNU2-41P-201ENST00000410991 178 ntBASIC1.12□□□□□ -2.23
LSM6P62312 USP9YP18-201ENST00000425912 695 ntBASIC1.12□□□□□ -2.23
LSM6P62312 AC015922.2-201ENST00000435593 184 ntBASIC1.12□□□□□ -2.23
LSM6P62312 USP9YP35-201ENST00000435696 412 ntBASIC1.12□□□□□ -2.23
LSM6P62312 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.12□□□□□ -2.23
LSM6P62312 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.12□□□□□ -2.23
LSM6P62312 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.12□□□□□ -2.23
LSM6P62312 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.12□□□□□ -2.23
LSM6P62312 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.12□□□□□ -2.23
LSM6P62312 RNU6-572P-201ENST00000516724 80 ntBASIC1.12□□□□□ -2.23
LSM6P62312 RN7SKP256-201ENST00000517201 314 ntBASIC1.12□□□□□ -2.23
LSM6P62312 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.12□□□□□ -2.23
LSM6P62312 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.12□□□□□ -2.23
LSM6P62312 AP003034.1-201ENST00000534621 422 ntBASIC1.12□□□□□ -2.23
LSM6P62312 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.12□□□□□ -2.23
LSM6P62312 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.12□□□□□ -2.23
LSM6P62312 AP001542.1-201ENST00000591314 200 ntBASIC1.12□□□□□ -2.23
LSM6P62312 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.12□□□□□ -2.23
LSM6P62312 AC078880.5-201ENST00000617845 421 ntBASIC1.12□□□□□ -2.23
LSM6P62312 AL353997.5-201ENST00000618886 171 ntBASIC1.12□□□□□ -2.23
LSM6P62312 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.12□□□□□ -2.23
LSM6P62312 AC090517.3-201ENST00000625170 141 ntBASIC1.12□□□□□ -2.23
LSM6P62312 AC099654.9-201ENST00000637055 678 ntBASIC1.12□□□□□ -2.23
LSM6P62312 HAUS6P2-201ENST00000433254 2404 ntBASIC1.12□□□□□ -2.23
LSM6P62312 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.12□□□□□ -2.23
LSM6P62312 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.12□□□□□ -2.23
LSM6P62312 FARSBP1-201ENST00000435808 1778 ntBASIC1.11□□□□□ -2.23
LSM6P62312 SNORA25.8-201ENST00000364831 128 ntBASIC1.11□□□□□ -2.23
LSM6P62312 MIR618-201ENST00000385287 98 ntBASIC1.11□□□□□ -2.23
LSM6P62312 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.11□□□□□ -2.23
LSM6P62312 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.11□□□□□ -2.23
LSM6P62312 SNRPEP7-201ENST00000438350 220 ntBASIC1.11□□□□□ -2.23
LSM6P62312 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.11□□□□□ -2.23
LSM6P62312 AL035666.1-201ENST00000446195 348 ntBASIC1.11□□□□□ -2.23
LSM6P62312 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.11□□□□□ -2.23
LSM6P62312 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.11□□□□□ -2.23
LSM6P62312 RNU7-59P-201ENST00000459101 61 ntBASIC1.11□□□□□ -2.23
LSM6P62312 AC004223.1-201ENST00000479840 271 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms