Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 SNORA26.9-201ENST00000391322 122 ntBASIC1.36□□□□□ -2.19
ACTBP60709 MIR1305-201ENST00000408300 86 ntBASIC1.36□□□□□ -2.19
ACTBP60709 RNU2-48P-201ENST00000410694 191 ntBASIC1.36□□□□□ -2.19
ACTBP60709 AC007098.1-201ENST00000420122 367 ntBASIC1.36□□□□□ -2.19
ACTBP60709 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.36□□□□□ -2.19
ACTBP60709 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.36□□□□□ -2.19
ACTBP60709 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.36□□□□□ -2.19
ACTBP60709 HMGB1P18-201ENST00000438801 619 ntBASIC1.36□□□□□ -2.19
ACTBP60709 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.36□□□□□ -2.19
ACTBP60709 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.36□□□□□ -2.19
ACTBP60709 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.36□□□□□ -2.19
ACTBP60709 AC016550.1-201ENST00000505348 785 ntBASIC1.36□□□□□ -2.19
ACTBP60709 RNU6-237P-201ENST00000515985 71 ntBASIC1.36□□□□□ -2.19
ACTBP60709 RNU6-250P-201ENST00000516958 103 ntBASIC1.36□□□□□ -2.19
ACTBP60709 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.36□□□□□ -2.19
ACTBP60709 AP004607.1-201ENST00000524456 203 ntBASIC1.36□□□□□ -2.19
ACTBP60709 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.36□□□□□ -2.19
ACTBP60709 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.36□□□□□ -2.19
ACTBP60709 AL354943.1-201ENST00000572103 781 ntBASIC1.36□□□□□ -2.19
ACTBP60709 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.36□□□□□ -2.19
ACTBP60709 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.36□□□□□ -2.19
ACTBP60709 AC007363.1-201ENST00000604736 620 ntBASIC1.36□□□□□ -2.19
ACTBP60709 BCRP9-201ENST00000605312 388 ntBASIC1.36□□□□□ -2.19
ACTBP60709 AL353997.5-201ENST00000618886 171 ntBASIC1.36□□□□□ -2.19
ACTBP60709 MTND5P10-201ENST00000603719 1809 ntBASIC1.36□□□□□ -2.19
ACTBP60709 RNA5SP432-201ENST00000362480 116 ntBASIC1.35□□□□□ -2.19
ACTBP60709 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
ACTBP60709 SNORD116-12-201ENST00000384468 92 ntBASIC1.35□□□□□ -2.19
ACTBP60709 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.35□□□□□ -2.19
ACTBP60709 AL133475.1-201ENST00000404414 305 ntBASIC1.35□□□□□ -2.19
ACTBP60709 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.35□□□□□ -2.19
ACTBP60709 AC008267.5-201ENST00000424928 265 ntBASIC1.35□□□□□ -2.19
ACTBP60709 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.35□□□□□ -2.19
ACTBP60709 LARP1BP3-201ENST00000437229 869 ntBASIC1.35□□□□□ -2.19
ACTBP60709 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.35□□□□□ -2.19
ACTBP60709 HMGN2P23-201ENST00000456759 269 ntBASIC1.35□□□□□ -2.19
ACTBP60709 RPS3AP22-201ENST00000488297 769 ntBASIC1.35□□□□□ -2.19
ACTBP60709 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.35□□□□□ -2.19
ACTBP60709 AC114801.2-201ENST00000503825 781 ntBASIC1.35□□□□□ -2.19
ACTBP60709 AC021146.2-201ENST00000504736 556 ntBASIC1.35□□□□□ -2.19
ACTBP60709 AC109927.2-201ENST00000506416 303 ntBASIC1.35□□□□□ -2.19
ACTBP60709 Y_RNA.675-201ENST00000516389 149 ntBASIC1.35□□□□□ -2.19
ACTBP60709 SNORA31.19-201ENST00000517079 126 ntBASIC1.35□□□□□ -2.19
ACTBP60709 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.35□□□□□ -2.19
ACTBP60709 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.35□□□□□ -2.19
ACTBP60709 MIR4422-201ENST00000581938 83 ntBASIC1.35□□□□□ -2.19
ACTBP60709 AC009977.1-201ENST00000586015 570 ntBASIC1.35□□□□□ -2.19
ACTBP60709 CYP2C61P-201ENST00000604072 290 ntBASIC1.35□□□□□ -2.19
ACTBP60709 PRR13P7-201ENST00000605538 430 ntBASIC1.35□□□□□ -2.19
ACTBP60709 MIR502-201ENST00000606349 86 ntBASIC1.35□□□□□ -2.19
ACTBP60709 AC098614.4-201ENST00000607601 462 ntBASIC1.35□□□□□ -2.19
ACTBP60709 MIR8081-201ENST00000611533 95 ntBASIC1.35□□□□□ -2.19
ACTBP60709 PART1_2.1-201ENST00000612397 250 ntBASIC1.35□□□□□ -2.19
ACTBP60709 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.35□□□□□ -2.19
ACTBP60709 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.35□□□□□ -2.19
ACTBP60709 AC099654.8-201ENST00000637757 681 ntBASIC1.35□□□□□ -2.19
ACTBP60709 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
ACTBP60709 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.35□□□□□ -2.19
ACTBP60709 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.35□□□□□ -2.19
ACTBP60709 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
ACTBP60709 AC092125.1-201ENST00000562568 1995 ntBASIC1.34□□□□□ -2.19
ACTBP60709 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.34□□□□□ -2.19
ACTBP60709 RNU6-701P-201ENST00000384059 107 ntBASIC1.34□□□□□ -2.19
ACTBP60709 RNU6-166P-201ENST00000384371 107 ntBASIC1.34□□□□□ -2.19
ACTBP60709 MIR320A-201ENST00000385302 82 ntBASIC1.34□□□□□ -2.19
ACTBP60709 RPS12P24-201ENST00000412619 387 ntBASIC1.34□□□□□ -2.19
ACTBP60709 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.34□□□□□ -2.19
ACTBP60709 BX510359.4-201ENST00000423750 193 ntBASIC1.34□□□□□ -2.19
ACTBP60709 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.34□□□□□ -2.19
ACTBP60709 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.34□□□□□ -2.19
ACTBP60709 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.34□□□□□ -2.19
ACTBP60709 AL591704.1-201ENST00000432574 275 ntBASIC1.34□□□□□ -2.19
ACTBP60709 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.34□□□□□ -2.19
ACTBP60709 MTCO2P20-201ENST00000437339 673 ntBASIC1.34□□□□□ -2.19
ACTBP60709 AP000949.1-201ENST00000438328 629 ntBASIC1.34□□□□□ -2.19
ACTBP60709 AL354941.1-201ENST00000438600 464 ntBASIC1.34□□□□□ -2.19
ACTBP60709 AL117351.1-201ENST00000438864 766 ntBASIC1.34□□□□□ -2.19
ACTBP60709 NEFMP1-201ENST00000443423 1006 ntBASIC1.34□□□□□ -2.19
ACTBP60709 AL358794.1-201ENST00000445689 381 ntBASIC1.34□□□□□ -2.19
ACTBP60709 AC104058.1-201ENST00000448028 297 ntBASIC1.34□□□□□ -2.19
ACTBP60709 BTF3P15-201ENST00000455606 336 ntBASIC1.34□□□□□ -2.19
ACTBP60709 AC108059.3-201ENST00000456388 214 ntBASIC1.34□□□□□ -2.19
ACTBP60709 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.34□□□□□ -2.19
ACTBP60709 FAM92A1P2-202ENST00000504766 877 ntBASIC1.34□□□□□ -2.19
ACTBP60709 RNU6-276P-201ENST00000516114 96 ntBASIC1.34□□□□□ -2.19
ACTBP60709 SNORA19.3-201ENST00000516165 130 ntBASIC1.34□□□□□ -2.19
ACTBP60709 SNORA25.15-201ENST00000516487 89 ntBASIC1.34□□□□□ -2.19
ACTBP60709 RNU6-667P-201ENST00000517186 102 ntBASIC1.34□□□□□ -2.19
ACTBP60709 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.34□□□□□ -2.19
ACTBP60709 CYCSP27-201ENST00000527643 293 ntBASIC1.34□□□□□ -2.19
ACTBP60709 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.34□□□□□ -2.19
ACTBP60709 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.34□□□□□ -2.19
ACTBP60709 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.34□□□□□ -2.19
ACTBP60709 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.34□□□□□ -2.19
ACTBP60709 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.34□□□□□ -2.19
ACTBP60709 BNIP3P9-201ENST00000603714 553 ntBASIC1.34□□□□□ -2.19
ACTBP60709 AC112220.3-201ENST00000605502 502 ntBASIC1.34□□□□□ -2.19
ACTBP60709 AC096772.1-201ENST00000609146 564 ntBASIC1.34□□□□□ -2.19
ACTBP60709 AL355472.4-201ENST00000610233 626 ntBASIC1.34□□□□□ -2.19
ACTBP60709 AC091834.1-201ENST00000614543 472 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms