Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RTP1P59025 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
RTP1P59025 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.24□□□□□ -1.73
RTP1P59025 AL079305.1-201ENST00000623159 3008 ntBASIC4.24□□□□□ -1.73
RTP1P59025 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RTP1P59025 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.24□□□□□ -1.73
RTP1P59025 AC009812.4-201ENST00000569134 1805 ntBASIC4.24□□□□□ -1.73
RTP1P59025 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RTP1P59025 UBE2L2-201ENST00000254302 429 ntBASIC4.24□□□□□ -1.73
RTP1P59025 Y_RNA.19-201ENST00000362462 99 ntBASIC4.24□□□□□ -1.73
RTP1P59025 RNA5SP322-201ENST00000363617 119 ntBASIC4.24□□□□□ -1.73
RTP1P59025 RNA5SP50-201ENST00000363731 107 ntBASIC4.24□□□□□ -1.73
RTP1P59025 SNORA20.1-201ENST00000364790 130 ntBASIC4.24□□□□□ -1.73
RTP1P59025 U8.8-201ENST00000365399 135 ntBASIC4.24□□□□□ -1.73
RTP1P59025 RNU6-1279P-201ENST00000383917 103 ntBASIC4.24□□□□□ -1.73
RTP1P59025 SNORA51.11-201ENST00000384442 131 ntBASIC4.24□□□□□ -1.73
RTP1P59025 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.24□□□□□ -1.73
RTP1P59025 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.24□□□□□ -1.73
RTP1P59025 RPL39P38-201ENST00000467018 153 ntBASIC4.24□□□□□ -1.73
RTP1P59025 HMGN2P13-201ENST00000476476 274 ntBASIC4.24□□□□□ -1.73
RTP1P59025 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.24□□□□□ -1.73
RTP1P59025 NDUFB4P9-201ENST00000511646 388 ntBASIC4.24□□□□□ -1.73
RTP1P59025 RNU6-897P-201ENST00000517135 105 ntBASIC4.24□□□□□ -1.73
RTP1P59025 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.24□□□□□ -1.73
RTP1P59025 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.24□□□□□ -1.73
RTP1P59025 AC006023.2-201ENST00000609916 167 ntBASIC4.24□□□□□ -1.73
RTP1P59025 MIR8058-201ENST00000615737 89 ntBASIC4.24□□□□□ -1.73
RTP1P59025 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.24□□□□□ -1.73
RTP1P59025 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.24□□□□□ -1.73
RTP1P59025 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RTP1P59025 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RTP1P59025 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RTP1P59025 LINC02471-203ENST00000641941 4752 ntBASIC4.23□□□□□ -1.73
RTP1P59025 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RTP1P59025 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RTP1P59025 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RTP1P59025 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.23□□□□□ -1.73
RTP1P59025 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RTP1P59025 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
RTP1P59025 Y_RNA.526-201ENST00000384572 110 ntBASIC4.23□□□□□ -1.73
RTP1P59025 Y_RNA.533-201ENST00000384596 114 ntBASIC4.23□□□□□ -1.73
RTP1P59025 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RTP1P59025 AL513475.1-201ENST00000406602 315 ntBASIC4.23□□□□□ -1.73
RTP1P59025 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.23□□□□□ -1.73
RTP1P59025 AC087650.1-201ENST00000431445 468 ntBASIC4.23□□□□□ -1.73
RTP1P59025 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.23□□□□□ -1.73
RTP1P59025 MTND4LP30-201ENST00000454092 297 ntBASIC4.23□□□□□ -1.73
RTP1P59025 AP001486.1-201ENST00000463339 476 ntBASIC4.23□□□□□ -1.73
RTP1P59025 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.23□□□□□ -1.73
RTP1P59025 FTH1P9-201ENST00000513251 355 ntBASIC4.23□□□□□ -1.73
RTP1P59025 RNU6-397P-201ENST00000516226 104 ntBASIC4.23□□□□□ -1.73
RTP1P59025 SNORA40.15-201ENST00000516884 107 ntBASIC4.23□□□□□ -1.73
RTP1P59025 RNA5SP471-201ENST00000516971 106 ntBASIC4.23□□□□□ -1.73
RTP1P59025 AC144568.1-201ENST00000520139 137 ntBASIC4.23□□□□□ -1.73
RTP1P59025 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RTP1P59025 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.23□□□□□ -1.73
RTP1P59025 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.23□□□□□ -1.73
RTP1P59025 AC004584.2-201ENST00000570407 410 ntBASIC4.23□□□□□ -1.73
RTP1P59025 AL121917.1-203ENST00000605534 577 ntBASIC4.23□□□□□ -1.73
RTP1P59025 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.23□□□□□ -1.73
RTP1P59025 RMST_4.1-201ENST00000616886 107 ntBASIC4.23□□□□□ -1.73
RTP1P59025 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RTP1P59025 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RTP1P59025 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RTP1P59025 AL133412.1-201ENST00000380194 2992 ntBASIC4.23□□□□□ -1.73
RTP1P59025 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
RTP1P59025 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RTP1P59025 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.22□□□□□ -1.73
RTP1P59025 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RTP1P59025 RNU4-50P-201ENST00000364361 141 ntBASIC4.22□□□□□ -1.73
RTP1P59025 RNU6-933P-201ENST00000384424 107 ntBASIC4.22□□□□□ -1.73
RTP1P59025 RNU1-89P-201ENST00000384592 164 ntBASIC4.22□□□□□ -1.73
RTP1P59025 RNU6-1093P-201ENST00000391194 107 ntBASIC4.22□□□□□ -1.73
RTP1P59025 AL591034.2-201ENST00000402839 359 ntBASIC4.22□□□□□ -1.73
RTP1P59025 AL513331.1-201ENST00000411908 397 ntBASIC4.22□□□□□ -1.73
RTP1P59025 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RTP1P59025 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.22□□□□□ -1.73
RTP1P59025 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.22□□□□□ -1.73
RTP1P59025 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.22□□□□□ -1.73
RTP1P59025 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.22□□□□□ -1.73
RTP1P59025 AL590664.1-201ENST00000448065 339 ntBASIC4.22□□□□□ -1.73
RTP1P59025 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RTP1P59025 AC087588.1-201ENST00000462203 316 ntBASIC4.22□□□□□ -1.73
RTP1P59025 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.22□□□□□ -1.73
RTP1P59025 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.22□□□□□ -1.73
RTP1P59025 IGKV2D-23-201ENST00000518179 286 ntBASIC4.22□□□□□ -1.73
RTP1P59025 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.22□□□□□ -1.73
RTP1P59025 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.22□□□□□ -1.73
RTP1P59025 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.22□□□□□ -1.73
RTP1P59025 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.22□□□□□ -1.73
RTP1P59025 AL121603.1-201ENST00000553815 142 ntBASIC4.22□□□□□ -1.73
RTP1P59025 TRAV37-201ENST00000553906 342 ntBASIC4.22□□□□□ -1.73
RTP1P59025 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.22□□□□□ -1.73
RTP1P59025 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.22□□□□□ -1.73
RTP1P59025 MIR1273C-201ENST00000578669 77 ntBASIC4.22□□□□□ -1.73
RTP1P59025 RNU1-30P-201ENST00000606575 163 ntBASIC4.22□□□□□ -1.73
RTP1P59025 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.22□□□□□ -1.73
RTP1P59025 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.22□□□□□ -1.73
RTP1P59025 U6.104-201ENST00000637979 90 ntBASIC4.22□□□□□ -1.73
RTP1P59025 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms