Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.8□□□□□ -1.96
CLDN20P56880 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.8□□□□□ -1.96
CLDN20P56880 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.8□□□□□ -1.96
CLDN20P56880 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.8□□□□□ -1.96
CLDN20P56880 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.8□□□□□ -1.96
CLDN20P56880 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.8□□□□□ -1.96
CLDN20P56880 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.8□□□□□ -1.96
CLDN20P56880 RPS29P20-201ENST00000489592 171 ntBASIC2.8□□□□□ -1.96
CLDN20P56880 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
CLDN20P56880 AC008885.1-201ENST00000514930 301 ntBASIC2.8□□□□□ -1.96
CLDN20P56880 RPL7P20-201ENST00000520308 745 ntBASIC2.8□□□□□ -1.96
CLDN20P56880 CYCSP27-201ENST00000527643 293 ntBASIC2.8□□□□□ -1.96
CLDN20P56880 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.8□□□□□ -1.96
CLDN20P56880 AC023050.3-201ENST00000541142 333 ntBASIC2.8□□□□□ -1.96
CLDN20P56880 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.8□□□□□ -1.96
CLDN20P56880 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.8□□□□□ -1.96
CLDN20P56880 CYCSP39-201ENST00000565821 309 ntBASIC2.8□□□□□ -1.96
CLDN20P56880 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.8□□□□□ -1.96
CLDN20P56880 HMGN2P15-201ENST00000585707 270 ntBASIC2.8□□□□□ -1.96
CLDN20P56880 BNIP3P25-201ENST00000596023 559 ntBASIC2.8□□□□□ -1.96
CLDN20P56880 ATP1B3P1-201ENST00000605365 821 ntBASIC2.8□□□□□ -1.96
CLDN20P56880 AC004852.3-201ENST00000614131 326 ntBASIC2.8□□□□□ -1.96
CLDN20P56880 AL161629.2-201ENST00000615347 275 ntBASIC2.8□□□□□ -1.96
CLDN20P56880 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.8□□□□□ -1.96
CLDN20P56880 MIR6733-201ENST00000635723 61 ntBASIC2.8□□□□□ -1.96
CLDN20P56880 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.8□□□□□ -1.96
CLDN20P56880 AC110491.1-201ENST00000562191 2010 ntBASIC2.8□□□□□ -1.96
CLDN20P56880 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CLDN20P56880 AC093536.2-201ENST00000565257 1406 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.79□□□□□ -1.96
CLDN20P56880 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CLDN20P56880 Y_RNA.160-201ENST00000363677 92 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 U8.9-201ENST00000365667 134 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 Y_RNA.530-201ENST00000384587 101 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 MIR128-1-201ENST00000384921 82 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 MIR10A-201ENST00000385043 110 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 MIR34A-201ENST00000385130 110 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 SNORA48.2-201ENST00000390926 124 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 EIF4E2P1-201ENST00000393781 255 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 AC138393.2-201ENST00000414742 246 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.79□□□□□ -1.96
CLDN20P56880 AL139281.1-201ENST00000422120 335 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 BPY2DP-201ENST00000422208 265 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.79□□□□□ -1.96
CLDN20P56880 MTATP6P23-201ENST00000440153 476 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 AC098831.1-201ENST00000440661 216 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 MTND3P10-201ENST00000450967 341 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 AC006483.1-201ENST00000487308 313 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 AC098799.2-201ENST00000509466 868 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 AC025465.4-201ENST00000513422 638 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 SNORA14.1-201ENST00000516113 141 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 RNA5SP341-201ENST00000516261 117 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 SNORA20.3-201ENST00000516880 132 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 RNU6-1314P-201ENST00000517139 104 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 SNORA31.21-201ENST00000517180 77 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.79□□□□□ -1.96
CLDN20P56880 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.79□□□□□ -1.96
CLDN20P56880 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.79□□□□□ -1.96
CLDN20P56880 LINC00933-203ENST00000559812 219 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 MIR548S-201ENST00000581352 82 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.79□□□□□ -1.96
CLDN20P56880 AL627309.6-201ENST00000606857 840 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.79□□□□□ -1.96
CLDN20P56880 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CLDN20P56880 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CLDN20P56880 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.79□□□□□ -1.96
CLDN20P56880 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CLDN20P56880 GABRG2-229ENST00000641017 3628 ntBASIC2.79□□□□□ -1.96
CLDN20P56880 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
CLDN20P56880 AC103988.1-201ENST00000566382 2177 ntBASIC2.78□□□□□ -1.96
CLDN20P56880 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CLDN20P56880 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.78□□□□□ -1.96
CLDN20P56880 MIR422A-201ENST00000362286 90 ntBASIC2.78□□□□□ -1.96
CLDN20P56880 RNU6-266P-201ENST00000364225 107 ntBASIC2.78□□□□□ -1.96
CLDN20P56880 Z98749.2-208ENST00000381646 500 ntBASIC2.78□□□□□ -1.96
CLDN20P56880 MIR181B1-201ENST00000385240 110 ntBASIC2.78□□□□□ -1.96
CLDN20P56880 SNORA48.5-201ENST00000391143 135 ntBASIC2.78□□□□□ -1.96
CLDN20P56880 RPL21P111-201ENST00000418453 477 ntBASIC2.78□□□□□ -1.96
CLDN20P56880 USP9YP20-201ENST00000419224 558 ntBASIC2.78□□□□□ -1.96
CLDN20P56880 AL645937.1-202ENST00000421799 937 ntBASIC2.78□□□□□ -1.96
CLDN20P56880 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.78□□□□□ -1.96
CLDN20P56880 RPS12P18-201ENST00000442381 270 ntBASIC2.78□□□□□ -1.96
CLDN20P56880 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.78□□□□□ -1.96
CLDN20P56880 AC083904.1-201ENST00000487828 231 ntBASIC2.78□□□□□ -1.96
CLDN20P56880 MTCO2P30-201ENST00000503662 364 ntBASIC2.78□□□□□ -1.96
CLDN20P56880 FAM206BP-201ENST00000510179 541 ntBASIC2.78□□□□□ -1.96
CLDN20P56880 AC010486.1-201ENST00000511793 424 ntBASIC2.78□□□□□ -1.96
CLDN20P56880 SNORA25.17-201ENST00000517184 124 ntBASIC2.78□□□□□ -1.96
CLDN20P56880 AC134698.4-201ENST00000523451 826 ntBASIC2.78□□□□□ -1.96
CLDN20P56880 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.78□□□□□ -1.96
CLDN20P56880 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.78□□□□□ -1.96
CLDN20P56880 PSMA3P-201ENST00000555485 635 ntBASIC2.78□□□□□ -1.96
CLDN20P56880 AC087045.1-201ENST00000605856 382 ntBASIC2.78□□□□□ -1.96
CLDN20P56880 AC002044.1-201ENST00000606707 158 ntBASIC2.78□□□□□ -1.96
CLDN20P56880 AC004832.5-201ENST00000608677 401 ntBASIC2.78□□□□□ -1.96
CLDN20P56880 AL162274.2-201ENST00000614406 332 ntBASIC2.78□□□□□ -1.96
CLDN20P56880 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.78□□□□□ -1.96
CLDN20P56880 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.78□□□□□ -1.96
CLDN20P56880 MIR622-201ENST00000638396 96 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms