Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MTND5P19-201ENST00000424872 1794 ntBASIC3.39□□□□□ -1.87
COPB1P53618 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
COPB1P53618 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COPB1P53618 AL360182.1-201ENST00000397433 468 ntBASIC3.39□□□□□ -1.87
COPB1P53618 AL357075.1-201ENST00000404107 726 ntBASIC3.39□□□□□ -1.87
COPB1P53618 BTF3L4P3-201ENST00000418879 476 ntBASIC3.39□□□□□ -1.87
COPB1P53618 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.39□□□□□ -1.87
COPB1P53618 AL356867.1-201ENST00000429623 299 ntBASIC3.39□□□□□ -1.87
COPB1P53618 VDAC1P3-201ENST00000434069 851 ntBASIC3.39□□□□□ -1.87
COPB1P53618 AC236972.2-201ENST00000434979 310 ntBASIC3.39□□□□□ -1.87
COPB1P53618 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.39□□□□□ -1.87
COPB1P53618 AC009969.1-201ENST00000438726 172 ntBASIC3.39□□□□□ -1.87
COPB1P53618 AC107399.1-201ENST00000451226 265 ntBASIC3.39□□□□□ -1.87
COPB1P53618 Y_RNA.635-201ENST00000459041 101 ntBASIC3.39□□□□□ -1.87
COPB1P53618 RPL31P60-201ENST00000478450 367 ntBASIC3.39□□□□□ -1.87
COPB1P53618 AC022493.1-201ENST00000492984 337 ntBASIC3.39□□□□□ -1.87
COPB1P53618 AC008526.1-201ENST00000509149 338 ntBASIC3.39□□□□□ -1.87
COPB1P53618 MTND3P25-201ENST00000509243 135 ntBASIC3.39□□□□□ -1.87
COPB1P53618 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.39□□□□□ -1.87
COPB1P53618 RNU6-559P-201ENST00000516151 98 ntBASIC3.39□□□□□ -1.87
COPB1P53618 RN7SKP43-201ENST00000516173 320 ntBASIC3.39□□□□□ -1.87
COPB1P53618 RNU6-1315P-201ENST00000517187 99 ntBASIC3.39□□□□□ -1.87
COPB1P53618 RN7SKP57-201ENST00000517248 293 ntBASIC3.39□□□□□ -1.87
COPB1P53618 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.39□□□□□ -1.87
COPB1P53618 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.39□□□□□ -1.87
COPB1P53618 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.39□□□□□ -1.87
COPB1P53618 MIR4790-201ENST00000577799 79 ntBASIC3.39□□□□□ -1.87
COPB1P53618 MIR1273C-201ENST00000578669 77 ntBASIC3.39□□□□□ -1.87
COPB1P53618 MIR548AC-201ENST00000585049 88 ntBASIC3.39□□□□□ -1.87
COPB1P53618 SCARNA15.3-201ENST00000626315 122 ntBASIC3.39□□□□□ -1.87
COPB1P53618 SCARNA4.1-201ENST00000628597 123 ntBASIC3.39□□□□□ -1.87
COPB1P53618 MIR3651-201ENST00000630427 90 ntBASIC3.39□□□□□ -1.87
COPB1P53618 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.39□□□□□ -1.87
COPB1P53618 AL512643.1-201ENST00000635735 524 ntBASIC3.39□□□□□ -1.87
COPB1P53618 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.39□□□□□ -1.87
COPB1P53618 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COPB1P53618 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.39□□□□□ -1.87
COPB1P53618 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
COPB1P53618 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.39□□□□□ -1.87
COPB1P53618 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
COPB1P53618 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.38□□□□□ -1.87
COPB1P53618 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
COPB1P53618 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
COPB1P53618 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
COPB1P53618 Y_RNA.259-201ENST00000364619 101 ntBASIC3.38□□□□□ -1.87
COPB1P53618 SNORA75B-201ENST00000384053 137 ntBASIC3.38□□□□□ -1.87
COPB1P53618 SNORA48.8-201ENST00000391324 134 ntBASIC3.38□□□□□ -1.87
COPB1P53618 MIR1302-11-201ENST00000408051 138 ntBASIC3.38□□□□□ -1.87
COPB1P53618 MIR1302-9-201ENST00000408365 138 ntBASIC3.38□□□□□ -1.87
COPB1P53618 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.38□□□□□ -1.87
COPB1P53618 MIR1302-10-201ENST00000408734 138 ntBASIC3.38□□□□□ -1.87
COPB1P53618 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
COPB1P53618 RNU2-33P-201ENST00000410344 192 ntBASIC3.38□□□□□ -1.87
COPB1P53618 RNU6-607P-201ENST00000411283 108 ntBASIC3.38□□□□□ -1.87
COPB1P53618 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.38□□□□□ -1.87
COPB1P53618 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.38□□□□□ -1.87
COPB1P53618 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.38□□□□□ -1.87
COPB1P53618 AC005534.2-201ENST00000431047 433 ntBASIC3.38□□□□□ -1.87
COPB1P53618 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.38□□□□□ -1.87
COPB1P53618 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.38□□□□□ -1.87
COPB1P53618 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.38□□□□□ -1.87
COPB1P53618 RPS15AP34-201ENST00000487776 387 ntBASIC3.38□□□□□ -1.87
COPB1P53618 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.38□□□□□ -1.87
COPB1P53618 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
COPB1P53618 Y_RNA.718-201ENST00000517110 102 ntBASIC3.38□□□□□ -1.87
COPB1P53618 AP003122.3-201ENST00000526316 255 ntBASIC3.38□□□□□ -1.87
COPB1P53618 AC084851.1-201ENST00000529105 249 ntBASIC3.38□□□□□ -1.87
COPB1P53618 AC007151.1-201ENST00000572774 483 ntBASIC3.38□□□□□ -1.87
COPB1P53618 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COPB1P53618 AC138761.3-201ENST00000579993 334 ntBASIC3.38□□□□□ -1.87
COPB1P53618 LRRC37A5P-203ENST00000580181 585 ntBASIC3.38□□□□□ -1.87
COPB1P53618 MIR3690-201ENST00000580266 75 ntBASIC3.38□□□□□ -1.87
COPB1P53618 MIR5692A1-201ENST00000580523 69 ntBASIC3.38□□□□□ -1.87
COPB1P53618 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.38□□□□□ -1.87
COPB1P53618 AC106900.2-201ENST00000604994 317 ntBASIC3.38□□□□□ -1.87
COPB1P53618 AC002044.1-201ENST00000606707 158 ntBASIC3.38□□□□□ -1.87
COPB1P53618 MIR1302-2-201ENST00000607096 138 ntBASIC3.38□□□□□ -1.87
COPB1P53618 AC064836.2-201ENST00000609491 462 ntBASIC3.38□□□□□ -1.87
COPB1P53618 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.38□□□□□ -1.87
COPB1P53618 MTND4LP32-201ENST00000636111 270 ntBASIC3.38□□□□□ -1.87
COPB1P53618 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COPB1P53618 AC008264.2-201ENST00000610193 3731 ntBASIC3.38□□□□□ -1.87
COPB1P53618 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.38□□□□□ -1.87
COPB1P53618 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
COPB1P53618 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.37□□□□□ -1.87
COPB1P53618 Y_RNA.138-201ENST00000363462 102 ntBASIC3.37□□□□□ -1.87
COPB1P53618 RNU6-266P-201ENST00000364225 107 ntBASIC3.37□□□□□ -1.87
COPB1P53618 RNU6-1297P-201ENST00000384415 104 ntBASIC3.37□□□□□ -1.87
COPB1P53618 RNU2-3P-201ENST00000410144 191 ntBASIC3.37□□□□□ -1.87
COPB1P53618 RPL37P10-201ENST00000412884 288 ntBASIC3.37□□□□□ -1.87
COPB1P53618 CYCSP33-201ENST00000414485 327 ntBASIC3.37□□□□□ -1.87
COPB1P53618 AL353621.1-201ENST00000418219 243 ntBASIC3.37□□□□□ -1.87
COPB1P53618 RPL7P37-201ENST00000425095 738 ntBASIC3.37□□□□□ -1.87
COPB1P53618 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.37□□□□□ -1.87
COPB1P53618 Z75741.1-201ENST00000446793 314 ntBASIC3.37□□□□□ -1.87
COPB1P53618 AL160314.1-201ENST00000490836 438 ntBASIC3.37□□□□□ -1.87
COPB1P53618 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.37□□□□□ -1.87
COPB1P53618 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.37□□□□□ -1.87
COPB1P53618 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.37□□□□□ -1.87
COPB1P53618 RN7SKP24-201ENST00000515888 284 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 190.7 ms