Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 WWP1P1-201ENST00000466609 2769 ntBASIC1.96□□□□□ -2.1
ACLYP53396 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.96□□□□□ -2.1
ACLYP53396 RNA5SP240-201ENST00000365355 128 ntBASIC1.96□□□□□ -2.1
ACLYP53396 RNU6-925P-201ENST00000384629 104 ntBASIC1.96□□□□□ -2.1
ACLYP53396 MIR518D-201ENST00000385014 87 ntBASIC1.96□□□□□ -2.1
ACLYP53396 U8.14-201ENST00000390843 143 ntBASIC1.96□□□□□ -2.1
ACLYP53396 SNORA40C-201ENST00000391285 128 ntBASIC1.96□□□□□ -2.1
ACLYP53396 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.96□□□□□ -2.1
ACLYP53396 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.96□□□□□ -2.1
ACLYP53396 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.96□□□□□ -2.1
ACLYP53396 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.96□□□□□ -2.1
ACLYP53396 AL591704.1-201ENST00000432574 275 ntBASIC1.96□□□□□ -2.1
ACLYP53396 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.96□□□□□ -2.1
ACLYP53396 CYP2C59P-201ENST00000457790 269 ntBASIC1.96□□□□□ -2.1
ACLYP53396 AC112771.1-201ENST00000463581 102 ntBASIC1.96□□□□□ -2.1
ACLYP53396 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
ACLYP53396 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.96□□□□□ -2.1
ACLYP53396 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.96□□□□□ -2.1
ACLYP53396 HSPE1P23-201ENST00000509838 286 ntBASIC1.96□□□□□ -2.1
ACLYP53396 RNU6-1003P-201ENST00000517099 105 ntBASIC1.96□□□□□ -2.1
ACLYP53396 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.96□□□□□ -2.1
ACLYP53396 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.96□□□□□ -2.1
ACLYP53396 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
ACLYP53396 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.96□□□□□ -2.1
ACLYP53396 AC007375.1-201ENST00000554513 578 ntBASIC1.96□□□□□ -2.1
ACLYP53396 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.96□□□□□ -2.1
ACLYP53396 AC105148.1-201ENST00000604961 409 ntBASIC1.96□□□□□ -2.1
ACLYP53396 AC022893.3-201ENST00000607665 437 ntBASIC1.96□□□□□ -2.1
ACLYP53396 MIR6840-201ENST00000611937 71 ntBASIC1.96□□□□□ -2.1
ACLYP53396 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.96□□□□□ -2.1
ACLYP53396 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.96□□□□□ -2.1
ACLYP53396 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.96□□□□□ -2.1
ACLYP53396 AC092104.1-201ENST00000497346 1441 ntBASIC1.96□□□□□ -2.1
ACLYP53396 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.96□□□□□ -2.1
ACLYP53396 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
ACLYP53396 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.95□□□□□ -2.1
ACLYP53396 Y_RNA.269-201ENST00000364685 89 ntBASIC1.95□□□□□ -2.1
ACLYP53396 RPS20P2-201ENST00000402520 389 ntBASIC1.95□□□□□ -2.1
ACLYP53396 HMGN2P38-201ENST00000423806 265 ntBASIC1.95□□□□□ -2.1
ACLYP53396 AL353777.1-201ENST00000425552 326 ntBASIC1.95□□□□□ -2.1
ACLYP53396 AL645568.3-201ENST00000433683 316 ntBASIC1.95□□□□□ -2.1
ACLYP53396 AC009238.1-201ENST00000442165 424 ntBASIC1.95□□□□□ -2.1
ACLYP53396 AC009237.6-201ENST00000446969 424 ntBASIC1.95□□□□□ -2.1
ACLYP53396 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.95□□□□□ -2.1
ACLYP53396 DUXAP8-207ENST00000456786 622 ntBASIC1.95□□□□□ -2.1
ACLYP53396 MTND2P39-201ENST00000457230 764 ntBASIC1.95□□□□□ -2.1
ACLYP53396 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.95□□□□□ -2.1
ACLYP53396 AC055731.1-201ENST00000474387 401 ntBASIC1.95□□□□□ -2.1
ACLYP53396 AC140059.1-201ENST00000489238 361 ntBASIC1.95□□□□□ -2.1
ACLYP53396 RNU6-914P-201ENST00000516749 109 ntBASIC1.95□□□□□ -2.1
ACLYP53396 RNU6-1092P-201ENST00000516955 87 ntBASIC1.95□□□□□ -2.1
ACLYP53396 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.95□□□□□ -2.1
ACLYP53396 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.95□□□□□ -2.1
ACLYP53396 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.95□□□□□ -2.1
ACLYP53396 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.95□□□□□ -2.1
ACLYP53396 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.95□□□□□ -2.1
ACLYP53396 AL139022.2-201ENST00000606934 443 ntBASIC1.95□□□□□ -2.1
ACLYP53396 RNU6-91P-201ENST00000607774 107 ntBASIC1.95□□□□□ -2.1
ACLYP53396 AP001486.3-201ENST00000615334 372 ntBASIC1.95□□□□□ -2.1
ACLYP53396 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
ACLYP53396 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.95□□□□□ -2.1
ACLYP53396 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.95□□□□□ -2.1
ACLYP53396 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.95□□□□□ -2.1
ACLYP53396 AC106754.1-201ENST00000562632 1513 ntBASIC1.95□□□□□ -2.1
ACLYP53396 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.94□□□□□ -2.1
ACLYP53396 Y_RNA.18-201ENST00000362461 102 ntBASIC1.94□□□□□ -2.1
ACLYP53396 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
ACLYP53396 Y_RNA.508-201ENST00000384502 114 ntBASIC1.94□□□□□ -2.1
ACLYP53396 MIR17-201ENST00000385012 84 ntBASIC1.94□□□□□ -2.1
ACLYP53396 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
ACLYP53396 AL133475.1-201ENST00000404414 305 ntBASIC1.94□□□□□ -2.1
ACLYP53396 CIR1P3-201ENST00000405137 479 ntBASIC1.94□□□□□ -2.1
ACLYP53396 RNU6-1025P-201ENST00000410629 104 ntBASIC1.94□□□□□ -2.1
ACLYP53396 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.94□□□□□ -2.1
ACLYP53396 EDDM3CP-201ENST00000415977 425 ntBASIC1.94□□□□□ -2.1
ACLYP53396 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.94□□□□□ -2.1
ACLYP53396 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.94□□□□□ -2.1
ACLYP53396 MTND1P20-201ENST00000430341 950 ntBASIC1.94□□□□□ -2.1
ACLYP53396 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.94□□□□□ -2.1
ACLYP53396 CR769776.1-201ENST00000441254 787 ntBASIC1.94□□□□□ -2.1
ACLYP53396 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.94□□□□□ -2.1
ACLYP53396 GPM6BP3-201ENST00000442797 145 ntBASIC1.94□□□□□ -2.1
ACLYP53396 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.94□□□□□ -2.1
ACLYP53396 RNU7-95P-201ENST00000459222 64 ntBASIC1.94□□□□□ -2.1
ACLYP53396 RPS3AP22-201ENST00000488297 769 ntBASIC1.94□□□□□ -2.1
ACLYP53396 AC109927.2-201ENST00000506416 303 ntBASIC1.94□□□□□ -2.1
ACLYP53396 RNU5A-4P-201ENST00000516588 111 ntBASIC1.94□□□□□ -2.1
ACLYP53396 RNU6-201P-201ENST00000517100 61 ntBASIC1.94□□□□□ -2.1
ACLYP53396 AL157871.3-201ENST00000557231 293 ntBASIC1.94□□□□□ -2.1
ACLYP53396 MTND1P8-201ENST00000571424 950 ntBASIC1.94□□□□□ -2.1
ACLYP53396 MIR3126-201ENST00000577443 74 ntBASIC1.94□□□□□ -2.1
ACLYP53396 AC007229.1-201ENST00000590455 412 ntBASIC1.94□□□□□ -2.1
ACLYP53396 AL031281.1-201ENST00000604049 488 ntBASIC1.94□□□□□ -2.1
ACLYP53396 AC130324.3-201ENST00000614165 542 ntBASIC1.94□□□□□ -2.1
ACLYP53396 AC006338.1-201ENST00000618453 749 ntBASIC1.94□□□□□ -2.1
ACLYP53396 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
ACLYP53396 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
ACLYP53396 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
ACLYP53396 AC138393.1-203ENST00000327086 343 ntBASIC1.93□□□□□ -2.1
ACLYP53396 Y_RNA.97-201ENST00000363094 102 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms