Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AL359821.1-201ENST00000605519 182 ntBASIC2.75□□□□□ -1.97
LBX1P52954 AL157786.1-207ENST00000627771 695 ntBASIC2.75□□□□□ -1.97
LBX1P52954 ZNF680P1-201ENST00000436625 1469 ntBASIC2.75□□□□□ -1.97
LBX1P52954 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LBX1P52954 TPTE2P4-201ENST00000258589 1605 ntBASIC2.75□□□□□ -1.97
LBX1P52954 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.74□□□□□ -1.97
LBX1P52954 UBE2L2-201ENST00000254302 429 ntBASIC2.74□□□□□ -1.97
LBX1P52954 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LBX1P52954 RNU6-190P-201ENST00000384154 102 ntBASIC2.74□□□□□ -1.97
LBX1P52954 RNU6-1215P-201ENST00000384441 102 ntBASIC2.74□□□□□ -1.97
LBX1P52954 RNU6-456P-201ENST00000384493 107 ntBASIC2.74□□□□□ -1.97
LBX1P52954 FAT1P1-201ENST00000406588 507 ntBASIC2.74□□□□□ -1.97
LBX1P52954 RNU6-387P-201ENST00000411331 105 ntBASIC2.74□□□□□ -1.97
LBX1P52954 RPS12P24-201ENST00000412619 387 ntBASIC2.74□□□□□ -1.97
LBX1P52954 EEF1A1P40-201ENST00000412883 573 ntBASIC2.74□□□□□ -1.97
LBX1P52954 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.74□□□□□ -1.97
LBX1P52954 AC245054.2-201ENST00000415639 319 ntBASIC2.74□□□□□ -1.97
LBX1P52954 ZNF885P-201ENST00000420174 1098 ntBASIC2.74□□□□□ -1.97
LBX1P52954 TMEM167AP1-201ENST00000423409 219 ntBASIC2.74□□□□□ -1.97
LBX1P52954 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.74□□□□□ -1.97
LBX1P52954 AC233279.1-201ENST00000455300 423 ntBASIC2.74□□□□□ -1.97
LBX1P52954 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.74□□□□□ -1.97
LBX1P52954 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.74□□□□□ -1.97
LBX1P52954 RPL39P36-201ENST00000490784 156 ntBASIC2.74□□□□□ -1.97
LBX1P52954 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.74□□□□□ -1.97
LBX1P52954 AC109927.2-201ENST00000506416 303 ntBASIC2.74□□□□□ -1.97
LBX1P52954 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.74□□□□□ -1.97
LBX1P52954 AC026436.1-201ENST00000510537 270 ntBASIC2.74□□□□□ -1.97
LBX1P52954 RNA5SP385-201ENST00000515947 110 ntBASIC2.74□□□□□ -1.97
LBX1P52954 SNORA31.1-201ENST00000515993 133 ntBASIC2.74□□□□□ -1.97
LBX1P52954 SNORA31.5-201ENST00000516190 133 ntBASIC2.74□□□□□ -1.97
LBX1P52954 RNU6-506P-201ENST00000516553 94 ntBASIC2.74□□□□□ -1.97
LBX1P52954 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.74□□□□□ -1.97
LBX1P52954 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.74□□□□□ -1.97
LBX1P52954 MIR3605-201ENST00000583214 100 ntBASIC2.74□□□□□ -1.97
LBX1P52954 BNIP3P30-201ENST00000601184 574 ntBASIC2.74□□□□□ -1.97
LBX1P52954 AC068790.6-201ENST00000602558 258 ntBASIC2.74□□□□□ -1.97
LBX1P52954 AL360085.1-201ENST00000604713 532 ntBASIC2.74□□□□□ -1.97
LBX1P52954 AC022893.3-201ENST00000607665 437 ntBASIC2.74□□□□□ -1.97
LBX1P52954 AC090517.2-201ENST00000614966 680 ntBASIC2.74□□□□□ -1.97
LBX1P52954 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.74□□□□□ -1.97
LBX1P52954 AC011155.2-201ENST00000623202 216 ntBASIC2.74□□□□□ -1.97
LBX1P52954 MIR6863-201ENST00000636112 90 ntBASIC2.74□□□□□ -1.97
LBX1P52954 MTND5P19-201ENST00000424872 1794 ntBASIC2.74□□□□□ -1.97
LBX1P52954 API5P2-201ENST00000397055 1498 ntBASIC2.73□□□□□ -1.97
LBX1P52954 OR4G2P-201ENST00000328113 903 ntBASIC2.73□□□□□ -1.97
LBX1P52954 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.73□□□□□ -1.97
LBX1P52954 SNORD115-7-201ENST00000365306 82 ntBASIC2.73□□□□□ -1.97
LBX1P52954 RNU6-641P-201ENST00000384006 107 ntBASIC2.73□□□□□ -1.97
LBX1P52954 MIR181A1-201ENST00000385026 110 ntBASIC2.73□□□□□ -1.97
LBX1P52954 RNU6-780P-201ENST00000391030 104 ntBASIC2.73□□□□□ -1.97
LBX1P52954 RNA5SP252-201ENST00000391131 119 ntBASIC2.73□□□□□ -1.97
LBX1P52954 RNU6-1158P-201ENST00000391167 107 ntBASIC2.73□□□□□ -1.97
LBX1P52954 RN7SKP123-201ENST00000410732 291 ntBASIC2.73□□□□□ -1.97
LBX1P52954 AF274854.1-201ENST00000413236 615 ntBASIC2.73□□□□□ -1.97
LBX1P52954 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.73□□□□□ -1.97
LBX1P52954 OR51A5P-201ENST00000415429 942 ntBASIC2.73□□□□□ -1.97
LBX1P52954 MTCO1P21-201ENST00000416634 589 ntBASIC2.73□□□□□ -1.97
LBX1P52954 BTF3P4-201ENST00000418852 495 ntBASIC2.73□□□□□ -1.97
LBX1P52954 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.73□□□□□ -1.97
LBX1P52954 TIMM9P3-201ENST00000428659 274 ntBASIC2.73□□□□□ -1.97
LBX1P52954 AC244505.4-201ENST00000434905 287 ntBASIC2.73□□□□□ -1.97
LBX1P52954 SSXP5-201ENST00000443473 287 ntBASIC2.73□□□□□ -1.97
LBX1P52954 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.73□□□□□ -1.97
LBX1P52954 DDX3P2-201ENST00000446138 111 ntBASIC2.73□□□□□ -1.97
LBX1P52954 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.73□□□□□ -1.97
LBX1P52954 MTND1P18-201ENST00000448191 573 ntBASIC2.73□□□□□ -1.97
LBX1P52954 PSPHP1-201ENST00000450062 261 ntBASIC2.73□□□□□ -1.97
LBX1P52954 AC003071.1-201ENST00000451219 789 ntBASIC2.73□□□□□ -1.97
LBX1P52954 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.73□□□□□ -1.97
LBX1P52954 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.73□□□□□ -1.97
LBX1P52954 RNU6-677P-201ENST00000516914 101 ntBASIC2.73□□□□□ -1.97
LBX1P52954 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.73□□□□□ -1.97
LBX1P52954 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
LBX1P52954 AC104383.1-201ENST00000530297 370 ntBASIC2.73□□□□□ -1.97
LBX1P52954 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.73□□□□□ -1.97
LBX1P52954 AK6P1-201ENST00000540219 478 ntBASIC2.73□□□□□ -1.97
LBX1P52954 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.73□□□□□ -1.97
LBX1P52954 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.73□□□□□ -1.97
LBX1P52954 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.73□□□□□ -1.97
LBX1P52954 MIR3609-201ENST00000582661 80 ntBASIC2.73□□□□□ -1.97
LBX1P52954 FTX_3.1-201ENST00000610451 147 ntBASIC2.73□□□□□ -1.97
LBX1P52954 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
LBX1P52954 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.73□□□□□ -1.97
LBX1P52954 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.73□□□□□ -1.97
LBX1P52954 MIR219B-201ENST00000637023 88 ntBASIC2.73□□□□□ -1.97
LBX1P52954 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LBX1P52954 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.73□□□□□ -1.97
LBX1P52954 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LBX1P52954 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
LBX1P52954 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.72□□□□□ -1.97
LBX1P52954 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.72□□□□□ -1.97
LBX1P52954 AC092881.1-201ENST00000638218 2733 ntBASIC2.72□□□□□ -1.97
LBX1P52954 MTND5P7-201ENST00000413558 1798 ntBASIC2.72□□□□□ -1.97
LBX1P52954 RNU6-179P-201ENST00000363350 107 ntBASIC2.72□□□□□ -1.97
LBX1P52954 SNORA14A-201ENST00000364773 135 ntBASIC2.72□□□□□ -1.97
LBX1P52954 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LBX1P52954 SNORA75B-201ENST00000384053 137 ntBASIC2.72□□□□□ -1.97
LBX1P52954 Y_RNA.576-201ENST00000384781 102 ntBASIC2.72□□□□□ -1.97
LBX1P52954 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms