Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.16□□□□□ -2.06
MSH6P52701 RNU6-415P-201ENST00000516252 97 ntBASIC2.16□□□□□ -2.06
MSH6P52701 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.16□□□□□ -2.06
MSH6P52701 MTATP6P15-201ENST00000527233 835 ntBASIC2.16□□□□□ -2.06
MSH6P52701 AC016957.1-201ENST00000534895 309 ntBASIC2.16□□□□□ -2.06
MSH6P52701 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.16□□□□□ -2.06
MSH6P52701 AP000403.1-201ENST00000603349 851 ntBASIC2.16□□□□□ -2.06
MSH6P52701 AC098657.3-201ENST00000620434 263 ntBASIC2.16□□□□□ -2.06
MSH6P52701 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.16□□□□□ -2.06
MSH6P52701 Y_RNA.18-201ENST00000362461 102 ntBASIC2.15□□□□□ -2.07
MSH6P52701 RNU6-1214P-201ENST00000363650 109 ntBASIC2.15□□□□□ -2.07
MSH6P52701 RNU6-461P-201ENST00000364195 107 ntBASIC2.15□□□□□ -2.07
MSH6P52701 SNORA6-201ENST00000384033 151 ntBASIC2.15□□□□□ -2.07
MSH6P52701 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.15□□□□□ -2.07
MSH6P52701 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.15□□□□□ -2.07
MSH6P52701 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.15□□□□□ -2.07
MSH6P52701 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.15□□□□□ -2.07
MSH6P52701 AL354941.1-201ENST00000438600 464 ntBASIC2.15□□□□□ -2.07
MSH6P52701 AC098831.1-201ENST00000440661 216 ntBASIC2.15□□□□□ -2.07
MSH6P52701 FABP5P15-201ENST00000453566 214 ntBASIC2.15□□□□□ -2.07
MSH6P52701 RNA5SP165-201ENST00000517142 115 ntBASIC2.15□□□□□ -2.07
MSH6P52701 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.15□□□□□ -2.07
MSH6P52701 AP006587.4-201ENST00000526053 529 ntBASIC2.15□□□□□ -2.07
MSH6P52701 NACAP3-201ENST00000552100 481 ntBASIC2.15□□□□□ -2.07
MSH6P52701 AC008015.1-201ENST00000555505 465 ntBASIC2.15□□□□□ -2.07
MSH6P52701 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.15□□□□□ -2.07
MSH6P52701 RPS15AP11-201ENST00000594193 385 ntBASIC2.15□□□□□ -2.07
MSH6P52701 AP000811.1-201ENST00000603803 651 ntBASIC2.15□□□□□ -2.07
MSH6P52701 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.15□□□□□ -2.07
MSH6P52701 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.15□□□□□ -2.07
MSH6P52701 AC068057.2-201ENST00000624047 895 ntBASIC2.15□□□□□ -2.07
MSH6P52701 MIR7515-201ENST00000637837 67 ntBASIC2.15□□□□□ -2.07
MSH6P52701 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
MSH6P52701 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
MSH6P52701 AC110491.1-201ENST00000562191 2010 ntBASIC2.14□□□□□ -2.07
MSH6P52701 Y_RNA.97-201ENST00000363094 102 ntBASIC2.14□□□□□ -2.07
MSH6P52701 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
MSH6P52701 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.14□□□□□ -2.07
MSH6P52701 HMGN2P19-201ENST00000425149 265 ntBASIC2.14□□□□□ -2.07
MSH6P52701 HMGB1P9-201ENST00000429856 646 ntBASIC2.14□□□□□ -2.07
MSH6P52701 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.14□□□□□ -2.07
MSH6P52701 RNU6-703P-201ENST00000516946 107 ntBASIC2.14□□□□□ -2.07
MSH6P52701 RNU6-201P-201ENST00000517100 61 ntBASIC2.14□□□□□ -2.07
MSH6P52701 SCARNA11.3-201ENST00000517276 130 ntBASIC2.14□□□□□ -2.07
MSH6P52701 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.14□□□□□ -2.07
MSH6P52701 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.14□□□□□ -2.07
MSH6P52701 AP003461.1-201ENST00000528866 78 ntBASIC2.14□□□□□ -2.07
MSH6P52701 AL356432.3-201ENST00000568952 465 ntBASIC2.14□□□□□ -2.07
MSH6P52701 MIR3146-201ENST00000580367 79 ntBASIC2.14□□□□□ -2.07
MSH6P52701 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.14□□□□□ -2.07
MSH6P52701 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.14□□□□□ -2.07
MSH6P52701 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.14□□□□□ -2.07
MSH6P52701 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.14□□□□□ -2.07
MSH6P52701 MIR6078-201ENST00000611069 100 ntBASIC2.14□□□□□ -2.07
MSH6P52701 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.14□□□□□ -2.07
MSH6P52701 DUSP12P1-201ENST00000612874 516 ntBASIC2.14□□□□□ -2.07
MSH6P52701 AC025594.3-201ENST00000613068 790 ntBASIC2.14□□□□□ -2.07
MSH6P52701 AC245884.12-201ENST00000615364 59 ntBASIC2.14□□□□□ -2.07
MSH6P52701 AC007490.1-201ENST00000624321 703 ntBASIC2.14□□□□□ -2.07
MSH6P52701 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
MSH6P52701 RNU6-512P-201ENST00000364438 103 ntBASIC2.13□□□□□ -2.07
MSH6P52701 RPS20P2-201ENST00000402520 389 ntBASIC2.13□□□□□ -2.07
MSH6P52701 RNU2-49P-201ENST00000410666 184 ntBASIC2.13□□□□□ -2.07
MSH6P52701 AC098592.1-201ENST00000419352 333 ntBASIC2.13□□□□□ -2.07
MSH6P52701 MED14P1-201ENST00000430517 648 ntBASIC2.13□□□□□ -2.07
MSH6P52701 GPM6BP2-201ENST00000432046 144 ntBASIC2.13□□□□□ -2.07
MSH6P52701 RPL37P21-201ENST00000435890 276 ntBASIC2.13□□□□□ -2.07
MSH6P52701 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.13□□□□□ -2.07
MSH6P52701 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.13□□□□□ -2.07
MSH6P52701 OSTCP8-201ENST00000445117 448 ntBASIC2.13□□□□□ -2.07
MSH6P52701 GPM6BP1-201ENST00000446387 144 ntBASIC2.13□□□□□ -2.07
MSH6P52701 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.13□□□□□ -2.07
MSH6P52701 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.13□□□□□ -2.07
MSH6P52701 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.13□□□□□ -2.07
MSH6P52701 AC098591.2-201ENST00000510152 315 ntBASIC2.13□□□□□ -2.07
MSH6P52701 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.13□□□□□ -2.07
MSH6P52701 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.13□□□□□ -2.07
MSH6P52701 AC084851.1-201ENST00000529105 249 ntBASIC2.13□□□□□ -2.07
MSH6P52701 MRPS36P5-201ENST00000551909 298 ntBASIC2.13□□□□□ -2.07
MSH6P52701 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.13□□□□□ -2.07
MSH6P52701 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.13□□□□□ -2.07
MSH6P52701 AC009127.3-201ENST00000570531 403 ntBASIC2.13□□□□□ -2.07
MSH6P52701 MIR4658-201ENST00000584344 65 ntBASIC2.13□□□□□ -2.07
MSH6P52701 AC008751.2-201ENST00000597885 980 ntBASIC2.13□□□□□ -2.07
MSH6P52701 AC012493.3-201ENST00000604494 112 ntBASIC2.13□□□□□ -2.07
MSH6P52701 AC090970.3-201ENST00000612566 866 ntBASIC2.13□□□□□ -2.07
MSH6P52701 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.13□□□□□ -2.07
MSH6P52701 AC010889.1-201ENST00000566193 2666 ntBASIC2.13□□□□□ -2.07
MSH6P52701 RNU6-660P-201ENST00000364566 109 ntBASIC2.12□□□□□ -2.07
MSH6P52701 RNU6-701P-201ENST00000384059 107 ntBASIC2.12□□□□□ -2.07
MSH6P52701 U3.40-201ENST00000408706 208 ntBASIC2.12□□□□□ -2.07
MSH6P52701 RNU6-1328P-201ENST00000410938 106 ntBASIC2.12□□□□□ -2.07
MSH6P52701 AC096649.2-201ENST00000416186 393 ntBASIC2.12□□□□□ -2.07
MSH6P52701 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.12□□□□□ -2.07
MSH6P52701 MTND4LP16-201ENST00000440828 295 ntBASIC2.12□□□□□ -2.07
MSH6P52701 GDI2P2-201ENST00000445131 608 ntBASIC2.12□□□□□ -2.07
MSH6P52701 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
MSH6P52701 AC105252.1-201ENST00000503089 286 ntBASIC2.12□□□□□ -2.07
MSH6P52701 AF131216.2-201ENST00000512316 564 ntBASIC2.12□□□□□ -2.07
MSH6P52701 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms