Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RNU6-946P-201ENST00000383878 107 ntBASIC1.84□□□□□ -2.11
CX3CR1P49238 MIR95-201ENST00000385072 81 ntBASIC1.84□□□□□ -2.11
CX3CR1P49238 MIR561-201ENST00000385216 97 ntBASIC1.84□□□□□ -2.11
CX3CR1P49238 AC127391.1-201ENST00000411737 98 ntBASIC1.84□□□□□ -2.11
CX3CR1P49238 CYCSP46-201ENST00000423569 204 ntBASIC1.84□□□□□ -2.11
CX3CR1P49238 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.84□□□□□ -2.11
CX3CR1P49238 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.84□□□□□ -2.11
CX3CR1P49238 AL021397.1-201ENST00000451806 248 ntBASIC1.84□□□□□ -2.11
CX3CR1P49238 AC010486.2-201ENST00000505572 483 ntBASIC1.84□□□□□ -2.11
CX3CR1P49238 AC010587.1-201ENST00000505809 469 ntBASIC1.84□□□□□ -2.11
CX3CR1P49238 RNU2-10P-201ENST00000516375 211 ntBASIC1.84□□□□□ -2.11
CX3CR1P49238 Y_RNA.689-201ENST00000516589 107 ntBASIC1.84□□□□□ -2.11
CX3CR1P49238 AC106038.2-201ENST00000520706 568 ntBASIC1.84□□□□□ -2.11
CX3CR1P49238 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.84□□□□□ -2.11
CX3CR1P49238 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.84□□□□□ -2.11
CX3CR1P49238 DUXAP5-201ENST00000529668 529 ntBASIC1.84□□□□□ -2.11
CX3CR1P49238 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.84□□□□□ -2.11
CX3CR1P49238 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.84□□□□□ -2.11
CX3CR1P49238 SNRPGP18-201ENST00000553000 214 ntBASIC1.84□□□□□ -2.11
CX3CR1P49238 AC012414.6-201ENST00000568241 401 ntBASIC1.84□□□□□ -2.11
CX3CR1P49238 MIR4529-201ENST00000578110 78 ntBASIC1.84□□□□□ -2.11
CX3CR1P49238 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.84□□□□□ -2.11
CX3CR1P49238 MIR4672-201ENST00000583126 81 ntBASIC1.84□□□□□ -2.11
CX3CR1P49238 MIR5002-201ENST00000584713 97 ntBASIC1.84□□□□□ -2.11
CX3CR1P49238 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CX3CR1P49238 AC174048.1-201ENST00000603389 144 ntBASIC1.84□□□□□ -2.11
CX3CR1P49238 AC112191.3-201ENST00000604371 277 ntBASIC1.84□□□□□ -2.11
CX3CR1P49238 NDUFA8P1-201ENST00000605525 367 ntBASIC1.84□□□□□ -2.11
CX3CR1P49238 AC092354.1-201ENST00000606057 376 ntBASIC1.84□□□□□ -2.11
CX3CR1P49238 MIR15A-201ENST00000607334 83 ntBASIC1.84□□□□□ -2.11
CX3CR1P49238 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.84□□□□□ -2.11
CX3CR1P49238 AC122133.1-201ENST00000613964 233 ntBASIC1.84□□□□□ -2.11
CX3CR1P49238 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
CX3CR1P49238 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.84□□□□□ -2.11
CX3CR1P49238 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
CX3CR1P49238 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CX3CR1P49238 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CX3CR1P49238 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CX3CR1P49238 RNU6-960P-201ENST00000364056 120 ntBASIC1.83□□□□□ -2.12
CX3CR1P49238 SNORA25B-201ENST00000365507 128 ntBASIC1.83□□□□□ -2.12
CX3CR1P49238 RNU6-1032P-201ENST00000384100 107 ntBASIC1.83□□□□□ -2.12
CX3CR1P49238 SNORA46.1-201ENST00000391069 153 ntBASIC1.83□□□□□ -2.12
CX3CR1P49238 RNA5SP338-201ENST00000410495 85 ntBASIC1.83□□□□□ -2.12
CX3CR1P49238 AC114491.1-201ENST00000416095 246 ntBASIC1.83□□□□□ -2.12
CX3CR1P49238 AC016831.2-201ENST00000417179 352 ntBASIC1.83□□□□□ -2.12
CX3CR1P49238 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.83□□□□□ -2.12
CX3CR1P49238 Z99497.1-201ENST00000421282 135 ntBASIC1.83□□□□□ -2.12
CX3CR1P49238 AC006366.1-201ENST00000422002 759 ntBASIC1.83□□□□□ -2.12
CX3CR1P49238 HMGN2P38-201ENST00000423806 265 ntBASIC1.83□□□□□ -2.12
CX3CR1P49238 MTND5P25-201ENST00000430499 799 ntBASIC1.83□□□□□ -2.12
CX3CR1P49238 MYL8P-204ENST00000431574 518 ntBASIC1.83□□□□□ -2.12
CX3CR1P49238 UBE2D3P4-201ENST00000441973 436 ntBASIC1.83□□□□□ -2.12
CX3CR1P49238 AL022238.1-201ENST00000442557 355 ntBASIC1.83□□□□□ -2.12
CX3CR1P49238 RPL23AP7-203ENST00000449021 469 ntBASIC1.83□□□□□ -2.12
CX3CR1P49238 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.83□□□□□ -2.12
CX3CR1P49238 AC117522.2-201ENST00000510049 657 ntBASIC1.83□□□□□ -2.12
CX3CR1P49238 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.83□□□□□ -2.12
CX3CR1P49238 FABP5P5-201ENST00000515537 406 ntBASIC1.83□□□□□ -2.12
CX3CR1P49238 AC022878.1-201ENST00000530684 149 ntBASIC1.83□□□□□ -2.12
CX3CR1P49238 AC135279.1-201ENST00000543493 504 ntBASIC1.83□□□□□ -2.12
CX3CR1P49238 AC009977.1-201ENST00000586015 570 ntBASIC1.83□□□□□ -2.12
CX3CR1P49238 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.83□□□□□ -2.12
CX3CR1P49238 AC002984.1-201ENST00000591692 448 ntBASIC1.83□□□□□ -2.12
CX3CR1P49238 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.83□□□□□ -2.12
CX3CR1P49238 AC087045.1-201ENST00000605856 382 ntBASIC1.83□□□□□ -2.12
CX3CR1P49238 AL451064.1-201ENST00000607718 471 ntBASIC1.83□□□□□ -2.12
CX3CR1P49238 AC009878.1-201ENST00000621819 340 ntBASIC1.83□□□□□ -2.12
CX3CR1P49238 AL603839.4-201ENST00000624658 1005 ntBASIC1.83□□□□□ -2.12
CX3CR1P49238 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.83□□□□□ -2.12
CX3CR1P49238 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.82□□□□□ -2.12
CX3CR1P49238 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CX3CR1P49238 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CX3CR1P49238 RNU6-858P-201ENST00000362436 107 ntBASIC1.82□□□□□ -2.12
CX3CR1P49238 Y_RNA.22-201ENST00000362492 102 ntBASIC1.82□□□□□ -2.12
CX3CR1P49238 RNU6-1159P-201ENST00000362933 107 ntBASIC1.82□□□□□ -2.12
CX3CR1P49238 RNA5SP160-201ENST00000364866 120 ntBASIC1.82□□□□□ -2.12
CX3CR1P49238 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.82□□□□□ -2.12
CX3CR1P49238 RNU6-190P-201ENST00000384154 102 ntBASIC1.82□□□□□ -2.12
CX3CR1P49238 HMGN2P39-201ENST00000398005 273 ntBASIC1.82□□□□□ -2.12
CX3CR1P49238 AL591034.2-201ENST00000402839 359 ntBASIC1.82□□□□□ -2.12
CX3CR1P49238 AL031779.1-201ENST00000415663 330 ntBASIC1.82□□□□□ -2.12
CX3CR1P49238 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.82□□□□□ -2.12
CX3CR1P49238 AL365203.2-201ENST00000423444 196 ntBASIC1.82□□□□□ -2.12
CX3CR1P49238 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.82□□□□□ -2.12
CX3CR1P49238 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.82□□□□□ -2.12
CX3CR1P49238 MTND1P26-201ENST00000440488 538 ntBASIC1.82□□□□□ -2.12
CX3CR1P49238 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.82□□□□□ -2.12
CX3CR1P49238 USP9YP12-201ENST00000450481 570 ntBASIC1.82□□□□□ -2.12
CX3CR1P49238 AC003071.1-201ENST00000451219 789 ntBASIC1.82□□□□□ -2.12
CX3CR1P49238 AC007182.2-201ENST00000489251 402 ntBASIC1.82□□□□□ -2.12
CX3CR1P49238 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
CX3CR1P49238 RNA5SP137-201ENST00000516833 135 ntBASIC1.82□□□□□ -2.12
CX3CR1P49238 RNA5SP364-201ENST00000516938 78 ntBASIC1.82□□□□□ -2.12
CX3CR1P49238 RNU2-46P-201ENST00000517038 113 ntBASIC1.82□□□□□ -2.12
CX3CR1P49238 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.82□□□□□ -2.12
CX3CR1P49238 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.82□□□□□ -2.12
CX3CR1P49238 OR11H5P-201ENST00000554039 926 ntBASIC1.82□□□□□ -2.12
CX3CR1P49238 RPL21P5-201ENST00000554662 472 ntBASIC1.82□□□□□ -2.12
CX3CR1P49238 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.82□□□□□ -2.12
CX3CR1P49238 AC026464.5-201ENST00000562497 722 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms