Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 AL355497.1-201ENST00000406262 551 ntBASIC1.79□□□□□ -2.12
BRCA1P38398 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.79□□□□□ -2.12
BRCA1P38398 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.79□□□□□ -2.12
BRCA1P38398 HMGN2P18-201ENST00000450680 270 ntBASIC1.79□□□□□ -2.12
BRCA1P38398 MTATP6P14-201ENST00000455189 673 ntBASIC1.79□□□□□ -2.12
BRCA1P38398 HSPE1P23-201ENST00000509838 286 ntBASIC1.79□□□□□ -2.12
BRCA1P38398 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.79□□□□□ -2.12
BRCA1P38398 SCARNA1-201ENST00000517138 166 ntBASIC1.79□□□□□ -2.12
BRCA1P38398 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.79□□□□□ -2.12
BRCA1P38398 DUXAP1-201ENST00000556632 463 ntBASIC1.79□□□□□ -2.12
BRCA1P38398 AL133241.1-201ENST00000556832 487 ntBASIC1.79□□□□□ -2.12
BRCA1P38398 BNIP3P23-201ENST00000599655 511 ntBASIC1.79□□□□□ -2.12
BRCA1P38398 uc_338.12-201ENST00000616344 181 ntBASIC1.79□□□□□ -2.12
BRCA1P38398 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.78□□□□□ -2.12
BRCA1P38398 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.78□□□□□ -2.12
BRCA1P38398 RNU6-1080P-201ENST00000383982 107 ntBASIC1.78□□□□□ -2.12
BRCA1P38398 RNU6-1032P-201ENST00000384100 107 ntBASIC1.78□□□□□ -2.12
BRCA1P38398 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.78□□□□□ -2.12
BRCA1P38398 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.78□□□□□ -2.12
BRCA1P38398 MTND3P1-201ENST00000441336 220 ntBASIC1.78□□□□□ -2.12
BRCA1P38398 RNA5SP165-201ENST00000517142 115 ntBASIC1.78□□□□□ -2.12
BRCA1P38398 AL138976.2-201ENST00000563989 694 ntBASIC1.78□□□□□ -2.12
BRCA1P38398 AC109446.2-201ENST00000567872 497 ntBASIC1.78□□□□□ -2.12
BRCA1P38398 MIR3167-201ENST00000579623 85 ntBASIC1.78□□□□□ -2.12
BRCA1P38398 OR1M4P-201ENST00000589199 287 ntBASIC1.78□□□□□ -2.12
BRCA1P38398 AL589743.7-201ENST00000612637 233 ntBASIC1.78□□□□□ -2.12
BRCA1P38398 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.78□□□□□ -2.12
BRCA1P38398 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.77□□□□□ -2.13
BRCA1P38398 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.77□□□□□ -2.13
BRCA1P38398 AIMP1P2-201ENST00000425294 312 ntBASIC1.77□□□□□ -2.13
BRCA1P38398 AL513185.2-201ENST00000425543 193 ntBASIC1.77□□□□□ -2.13
BRCA1P38398 USP9YP18-201ENST00000425912 695 ntBASIC1.77□□□□□ -2.13
BRCA1P38398 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.77□□□□□ -2.13
BRCA1P38398 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.77□□□□□ -2.13
BRCA1P38398 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.77□□□□□ -2.13
BRCA1P38398 MTND4P25-201ENST00000441039 533 ntBASIC1.77□□□□□ -2.13
BRCA1P38398 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.77□□□□□ -2.13
BRCA1P38398 AC112206.4-201ENST00000515142 405 ntBASIC1.77□□□□□ -2.13
BRCA1P38398 SNORA31.6-201ENST00000516241 130 ntBASIC1.77□□□□□ -2.13
BRCA1P38398 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.77□□□□□ -2.13
BRCA1P38398 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.77□□□□□ -2.13
BRCA1P38398 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.77□□□□□ -2.13
BRCA1P38398 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.77□□□□□ -2.13
BRCA1P38398 PCMTD1P2-201ENST00000565017 355 ntBASIC1.77□□□□□ -2.13
BRCA1P38398 AC012213.3-201ENST00000577199 777 ntBASIC1.77□□□□□ -2.13
BRCA1P38398 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.77□□□□□ -2.13
BRCA1P38398 AL078603.1-201ENST00000603824 313 ntBASIC1.77□□□□□ -2.13
BRCA1P38398 AC068276.1-201ENST00000605793 379 ntBASIC1.77□□□□□ -2.13
BRCA1P38398 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.77□□□□□ -2.13
BRCA1P38398 AC135507.1-201ENST00000607214 561 ntBASIC1.77□□□□□ -2.13
BRCA1P38398 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.77□□□□□ -2.13
BRCA1P38398 AC099654.8-201ENST00000637757 681 ntBASIC1.77□□□□□ -2.13
BRCA1P38398 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.77□□□□□ -2.13
BRCA1P38398 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.77□□□□□ -2.13
BRCA1P38398 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
BRCA1P38398 RNU6-529P-201ENST00000363383 104 ntBASIC1.77□□□□□ -2.13
BRCA1P38398 AC127391.1-201ENST00000411737 98 ntBASIC1.77□□□□□ -2.13
BRCA1P38398 SKA2P1-201ENST00000425592 390 ntBASIC1.77□□□□□ -2.13
BRCA1P38398 CALM1P1-201ENST00000442082 433 ntBASIC1.77□□□□□ -2.13
BRCA1P38398 PTENP1-201ENST00000447117 1215 ntBASIC1.77□□□□□ -2.13
BRCA1P38398 HMGN2P10-201ENST00000448085 265 ntBASIC1.77□□□□□ -2.13
BRCA1P38398 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.77□□□□□ -2.13
BRCA1P38398 RPS29P1-201ENST00000465274 159 ntBASIC1.77□□□□□ -2.13
BRCA1P38398 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.77□□□□□ -2.13
BRCA1P38398 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.77□□□□□ -2.13
BRCA1P38398 Y_RNA.689-201ENST00000516589 107 ntBASIC1.77□□□□□ -2.13
BRCA1P38398 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.77□□□□□ -2.13
BRCA1P38398 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.77□□□□□ -2.13
BRCA1P38398 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.77□□□□□ -2.13
BRCA1P38398 VN1R82P-201ENST00000601481 356 ntBASIC1.77□□□□□ -2.13
BRCA1P38398 MTCYBP22-201ENST00000603788 447 ntBASIC1.77□□□□□ -2.13
BRCA1P38398 uc_338.20-201ENST00000621563 178 ntBASIC1.77□□□□□ -2.13
BRCA1P38398 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.77□□□□□ -2.13
BRCA1P38398 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
BRCA1P38398 TEX21P-201ENST00000447107 1476 ntBASIC1.76□□□□□ -2.13
BRCA1P38398 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
BRCA1P38398 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.76□□□□□ -2.13
BRCA1P38398 AC009518.2-201ENST00000418056 731 ntBASIC1.76□□□□□ -2.13
BRCA1P38398 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.76□□□□□ -2.13
BRCA1P38398 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.76□□□□□ -2.13
BRCA1P38398 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.76□□□□□ -2.13
BRCA1P38398 AC136618.2-201ENST00000575091 400 ntBASIC1.76□□□□□ -2.13
BRCA1P38398 AC024614.2-201ENST00000577584 372 ntBASIC1.76□□□□□ -2.13
BRCA1P38398 AC112187.2-201ENST00000604345 283 ntBASIC1.76□□□□□ -2.13
BRCA1P38398 AL157392.4-201ENST00000609756 345 ntBASIC1.76□□□□□ -2.13
BRCA1P38398 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.76□□□□□ -2.13
BRCA1P38398 AL365204.3-201ENST00000612448 685 ntBASIC1.76□□□□□ -2.13
BRCA1P38398 MIR6788-201ENST00000618842 66 ntBASIC1.76□□□□□ -2.13
BRCA1P38398 AL031667.3-201ENST00000620124 655 ntBASIC1.76□□□□□ -2.13
BRCA1P38398 AC103710.2-202ENST00000641454 2853 ntBASIC1.76□□□□□ -2.13
BRCA1P38398 Z75746.1-201ENST00000440243 2080 ntBASIC1.76□□□□□ -2.13
BRCA1P38398 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
BRCA1P38398 RNU6-621P-201ENST00000364752 109 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 RNU6-898P-201ENST00000365627 104 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 NDUFS5P1-201ENST00000405668 289 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 POLR2J4-204ENST00000418424 324 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 AC097463.2-201ENST00000421074 142 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 RPS15AP9-201ENST00000439856 381 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 BTF3P15-201ENST00000455606 336 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 RPL39P36-201ENST00000490784 156 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms