Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC040896.1-201ENST00000613819 479 ntBASIC0.4□□□□□ -2.35
SNCAP37840 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.4□□□□□ -2.35
SNCAP37840 RNU1-93P-201ENST00000364704 169 ntBASIC0.39□□□□□ -2.35
SNCAP37840 RNU6-673P-201ENST00000365084 104 ntBASIC0.39□□□□□ -2.35
SNCAP37840 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.39□□□□□ -2.35
SNCAP37840 MIR520E-201ENST00000384867 87 ntBASIC0.39□□□□□ -2.35
SNCAP37840 AC007435.1-201ENST00000421086 415 ntBASIC0.39□□□□□ -2.35
SNCAP37840 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.39□□□□□ -2.35
SNCAP37840 ISCA1P6-201ENST00000427740 390 ntBASIC0.39□□□□□ -2.35
SNCAP37840 CBX3P6-201ENST00000430257 527 ntBASIC0.39□□□□□ -2.35
SNCAP37840 SNRPEP7-201ENST00000438350 220 ntBASIC0.39□□□□□ -2.35
SNCAP37840 SNRPFP3-201ENST00000457792 225 ntBASIC0.39□□□□□ -2.35
SNCAP37840 AC112771.1-201ENST00000463581 102 ntBASIC0.39□□□□□ -2.35
SNCAP37840 AL160314.1-201ENST00000490836 438 ntBASIC0.39□□□□□ -2.35
SNCAP37840 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.39□□□□□ -2.35
SNCAP37840 RNU6-237P-201ENST00000515985 71 ntBASIC0.39□□□□□ -2.35
SNCAP37840 RNU6-586P-201ENST00000517265 104 ntBASIC0.39□□□□□ -2.35
SNCAP37840 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
SNCAP37840 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.39□□□□□ -2.35
SNCAP37840 TRAV32-201ENST00000553993 340 ntBASIC0.39□□□□□ -2.35
SNCAP37840 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.39□□□□□ -2.35
SNCAP37840 AC015688.6-201ENST00000577737 104 ntBASIC0.39□□□□□ -2.35
SNCAP37840 MZT1P2-201ENST00000604387 248 ntBASIC0.39□□□□□ -2.35
SNCAP37840 AC009229.3-201ENST00000608056 282 ntBASIC0.39□□□□□ -2.35
SNCAP37840 AL159972.1-201ENST00000625150 448 ntBASIC0.39□□□□□ -2.35
SNCAP37840 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.39□□□□□ -2.35
SNCAP37840 ZNF849P-201ENST00000594711 1566 ntBASIC0.39□□□□□ -2.35
SNCAP37840 OR4G1P-203ENST00000641984 1631 ntBASIC0.38□□□□□ -2.35
SNCAP37840 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
SNCAP37840 RNU6-1065P-201ENST00000384513 106 ntBASIC0.38□□□□□ -2.35
SNCAP37840 MRPL35P1-201ENST00000404272 572 ntBASIC0.38□□□□□ -2.35
SNCAP37840 AC114737.2-201ENST00000421583 173 ntBASIC0.38□□□□□ -2.35
SNCAP37840 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.38□□□□□ -2.35
SNCAP37840 BET1P1-201ENST00000482276 359 ntBASIC0.38□□□□□ -2.35
SNCAP37840 AC134050.1-201ENST00000495088 933 ntBASIC0.38□□□□□ -2.35
SNCAP37840 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.38□□□□□ -2.35
SNCAP37840 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.38□□□□□ -2.35
SNCAP37840 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.38□□□□□ -2.35
SNCAP37840 AC022616.8-201ENST00000533569 253 ntBASIC0.38□□□□□ -2.35
SNCAP37840 AC011604.1-201ENST00000545978 196 ntBASIC0.38□□□□□ -2.35
SNCAP37840 AL512310.8-201ENST00000550183 120 ntBASIC0.38□□□□□ -2.35
SNCAP37840 AC008751.2-201ENST00000597885 980 ntBASIC0.38□□□□□ -2.35
SNCAP37840 AP003465.2-201ENST00000602571 373 ntBASIC0.38□□□□□ -2.35
SNCAP37840 AC083806.3-201ENST00000614016 455 ntBASIC0.38□□□□□ -2.35
SNCAP37840 AL603758.1-201ENST00000618654 241 ntBASIC0.38□□□□□ -2.35
SNCAP37840 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.38□□□□□ -2.35
SNCAP37840 MTND5P35-201ENST00000557537 1720 ntBASIC0.38□□□□□ -2.35
SNCAP37840 AC138393.1-203ENST00000327086 343 ntBASIC0.37□□□□□ -2.35
SNCAP37840 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
SNCAP37840 RNA5SP347-201ENST00000362445 119 ntBASIC0.37□□□□□ -2.35
SNCAP37840 RNU6-112P-201ENST00000363599 104 ntBASIC0.37□□□□□ -2.35
SNCAP37840 MIR10B-201ENST00000385011 110 ntBASIC0.37□□□□□ -2.35
SNCAP37840 AL161935.2-201ENST00000414627 60 ntBASIC0.37□□□□□ -2.35
SNCAP37840 AC114482.1-201ENST00000418010 247 ntBASIC0.37□□□□□ -2.35
SNCAP37840 AL022400.1-201ENST00000423946 935 ntBASIC0.37□□□□□ -2.35
SNCAP37840 ELOCP14-201ENST00000428070 331 ntBASIC0.37□□□□□ -2.35
SNCAP37840 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.37□□□□□ -2.35
SNCAP37840 AC005345.1-201ENST00000431868 217 ntBASIC0.37□□□□□ -2.35
SNCAP37840 ELOCP7-201ENST00000439968 331 ntBASIC0.37□□□□□ -2.35
SNCAP37840 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.37□□□□□ -2.35
SNCAP37840 HMGN2P9-201ENST00000476875 229 ntBASIC0.37□□□□□ -2.35
SNCAP37840 RPL30P1-201ENST00000488676 339 ntBASIC0.37□□□□□ -2.35
SNCAP37840 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.37□□□□□ -2.35
SNCAP37840 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.37□□□□□ -2.35
SNCAP37840 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.37□□□□□ -2.35
SNCAP37840 RNU6-528P-201ENST00000516926 100 ntBASIC0.37□□□□□ -2.35
SNCAP37840 AC044913.1-201ENST00000557200 430 ntBASIC0.37□□□□□ -2.35
SNCAP37840 AC136443.5-201ENST00000603741 370 ntBASIC0.37□□□□□ -2.35
SNCAP37840 RNU6-115P-201ENST00000364310 107 ntBASIC0.36□□□□□ -2.35
SNCAP37840 Y_RNA.255-201ENST00000364581 97 ntBASIC0.36□□□□□ -2.35
SNCAP37840 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
SNCAP37840 AC119751.3-201ENST00000399720 670 ntBASIC0.36□□□□□ -2.35
SNCAP37840 RNU6-77P-201ENST00000410554 91 ntBASIC0.36□□□□□ -2.35
SNCAP37840 AL592310.1-201ENST00000414330 671 ntBASIC0.36□□□□□ -2.35
SNCAP37840 AL451054.2-201ENST00000420896 202 ntBASIC0.36□□□□□ -2.35
SNCAP37840 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.36□□□□□ -2.35
SNCAP37840 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.36□□□□□ -2.35
SNCAP37840 RPL23AP35-201ENST00000451906 501 ntBASIC0.36□□□□□ -2.35
SNCAP37840 AC011005.2-201ENST00000487324 359 ntBASIC0.36□□□□□ -2.35
SNCAP37840 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.36□□□□□ -2.35
SNCAP37840 HMGN1P13-201ENST00000505795 138 ntBASIC0.36□□□□□ -2.35
SNCAP37840 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.36□□□□□ -2.35
SNCAP37840 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.36□□□□□ -2.35
SNCAP37840 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.36□□□□□ -2.35
SNCAP37840 VN1R82P-201ENST00000601481 356 ntBASIC0.36□□□□□ -2.35
SNCAP37840 AL020997.3-201ENST00000602843 359 ntBASIC0.36□□□□□ -2.35
SNCAP37840 AL355598.1-201ENST00000604169 202 ntBASIC0.36□□□□□ -2.35
SNCAP37840 AC068205.3-201ENST00000636385 468 ntBASIC0.36□□□□□ -2.35
SNCAP37840 AL590396.2-201ENST00000636511 1041 ntBASIC0.36□□□□□ -2.35
SNCAP37840 AC009950.2-201ENST00000636548 183 ntBASIC0.36□□□□□ -2.35
SNCAP37840 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
SNCAP37840 Y_RNA.99-201ENST00000363138 105 ntBASIC0.35□□□□□ -2.35
SNCAP37840 RNU5E-8P-201ENST00000363502 116 ntBASIC0.35□□□□□ -2.35
SNCAP37840 RNU6-296P-201ENST00000384608 107 ntBASIC0.35□□□□□ -2.35
SNCAP37840 RNU6-564P-201ENST00000410983 104 ntBASIC0.35□□□□□ -2.35
SNCAP37840 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.35□□□□□ -2.35
SNCAP37840 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.35□□□□□ -2.35
SNCAP37840 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.35□□□□□ -2.35
SNCAP37840 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.35□□□□□ -2.35
SNCAP37840 COX6CP6-201ENST00000490840 228 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms