Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AC136624.4-201ENST00000573044 370 ntBASIC5.38□□□□□ -1.55
CLCN1P35523 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC5.38□□□□□ -1.55
CLCN1P35523 AL359198.2-201ENST00000611836 194 ntBASIC5.38□□□□□ -1.55
CLCN1P35523 AC084757.4-201ENST00000616350 526 ntBASIC5.38□□□□□ -1.55
CLCN1P35523 MESTIT1_1.1-201ENST00000618871 140 ntBASIC5.38□□□□□ -1.55
CLCN1P35523 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLCN1P35523 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.38□□□□□ -1.55
CLCN1P35523 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.38□□□□□ -1.55
CLCN1P35523 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.38□□□□□ -1.55
CLCN1P35523 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLCN1P35523 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLCN1P35523 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC5.37□□□□□ -1.55
CLCN1P35523 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLCN1P35523 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLCN1P35523 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CLCN1P35523 RNU5F-3P-201ENST00000363767 117 ntBASIC5.37□□□□□ -1.55
CLCN1P35523 MIR223-201ENST00000385204 110 ntBASIC5.37□□□□□ -1.55
CLCN1P35523 AL357139.1-201ENST00000407792 426 ntBASIC5.37□□□□□ -1.55
CLCN1P35523 U3.36-201ENST00000408418 213 ntBASIC5.37□□□□□ -1.55
CLCN1P35523 RN7SKP61-201ENST00000410642 295 ntBASIC5.37□□□□□ -1.55
CLCN1P35523 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.37□□□□□ -1.55
CLCN1P35523 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.37□□□□□ -1.55
CLCN1P35523 RPS29P9-201ENST00000440360 171 ntBASIC5.37□□□□□ -1.55
CLCN1P35523 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.37□□□□□ -1.55
CLCN1P35523 RN7SL30P-201ENST00000488416 306 ntBASIC5.37□□□□□ -1.55
CLCN1P35523 AC008897.1-201ENST00000494006 347 ntBASIC5.37□□□□□ -1.55
CLCN1P35523 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC5.37□□□□□ -1.55
CLCN1P35523 AC021231.3-201ENST00000558497 370 ntBASIC5.37□□□□□ -1.55
CLCN1P35523 AC055872.1-201ENST00000570978 278 ntBASIC5.37□□□□□ -1.55
CLCN1P35523 AC015912.2-201ENST00000571053 181 ntBASIC5.37□□□□□ -1.55
CLCN1P35523 AC011447.4-201ENST00000587562 111 ntBASIC5.37□□□□□ -1.55
CLCN1P35523 AL591926.8-201ENST00000616876 211 ntBASIC5.37□□□□□ -1.55
CLCN1P35523 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.37□□□□□ -1.55
CLCN1P35523 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLCN1P35523 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CLCN1P35523 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CLCN1P35523 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLCN1P35523 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.36□□□□□ -1.55
CLCN1P35523 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
CLCN1P35523 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLCN1P35523 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.36□□□□□ -1.55
CLCN1P35523 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLCN1P35523 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLCN1P35523 RNU4-80P-201ENST00000363200 141 ntBASIC5.36□□□□□ -1.55
CLCN1P35523 Y_RNA.272-201ENST00000364696 102 ntBASIC5.36□□□□□ -1.55
CLCN1P35523 RNU6-211P-201ENST00000384047 107 ntBASIC5.36□□□□□ -1.55
CLCN1P35523 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.36□□□□□ -1.55
CLCN1P35523 RNU2-51P-201ENST00000410708 197 ntBASIC5.36□□□□□ -1.55
CLCN1P35523 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC5.36□□□□□ -1.55
CLCN1P35523 AC112220.1-201ENST00000434628 355 ntBASIC5.36□□□□□ -1.55
CLCN1P35523 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.36□□□□□ -1.55
CLCN1P35523 AC012308.1-201ENST00000451232 178 ntBASIC5.36□□□□□ -1.55
CLCN1P35523 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5.36□□□□□ -1.55
CLCN1P35523 RNU6-625P-201ENST00000459412 107 ntBASIC5.36□□□□□ -1.55
CLCN1P35523 RPSAP50-201ENST00000481955 852 ntBASIC5.36□□□□□ -1.55
CLCN1P35523 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.36□□□□□ -1.55
CLCN1P35523 RNA5SP446-201ENST00000515955 82 ntBASIC5.36□□□□□ -1.55
CLCN1P35523 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.36□□□□□ -1.55
CLCN1P35523 AC233702.2-202ENST00000562547 291 ntBASIC5.36□□□□□ -1.55
CLCN1P35523 MIR5692C2-201ENST00000577959 77 ntBASIC5.36□□□□□ -1.55
CLCN1P35523 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.36□□□□□ -1.55
CLCN1P35523 AC012468.1-201ENST00000604888 430 ntBASIC5.36□□□□□ -1.55
CLCN1P35523 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.36□□□□□ -1.55
CLCN1P35523 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CLCN1P35523 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CLCN1P35523 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLCN1P35523 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC5.36□□□□□ -1.55
CLCN1P35523 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.36□□□□□ -1.55
CLCN1P35523 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLCN1P35523 AL138820.1-201ENST00000617901 5305 ntBASIC5.35□□□□□ -1.55
CLCN1P35523 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLCN1P35523 RAD17P1-201ENST00000418130 2042 ntBASIC5.35□□□□□ -1.55
CLCN1P35523 AC018555.1-201ENST00000567548 1980 ntBASIC5.35□□□□□ -1.55
CLCN1P35523 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.35□□□□□ -1.55
CLCN1P35523 C4BPAP1-201ENST00000415474 1893 ntBASIC5.35□□□□□ -1.55
CLCN1P35523 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CLCN1P35523 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CLCN1P35523 SNURFL-201ENST00000309296 343 ntBASIC5.35□□□□□ -1.55
CLCN1P35523 RPL23P2-201ENST00000320371 421 ntBASIC5.35□□□□□ -1.55
CLCN1P35523 DLEU2_6.3-201ENST00000340052 136 ntBASIC5.35□□□□□ -1.55
CLCN1P35523 AC092268.1-201ENST00000342691 405 ntBASIC5.35□□□□□ -1.55
CLCN1P35523 RNU6-1280P-201ENST00000365211 107 ntBASIC5.35□□□□□ -1.55
CLCN1P35523 Y_RNA.343-201ENST00000365354 112 ntBASIC5.35□□□□□ -1.55
CLCN1P35523 RNU6-1130P-201ENST00000365434 107 ntBASIC5.35□□□□□ -1.55
CLCN1P35523 RNU5E-9P-201ENST00000411164 104 ntBASIC5.35□□□□□ -1.55
CLCN1P35523 AC078809.1-201ENST00000427601 140 ntBASIC5.35□□□□□ -1.55
CLCN1P35523 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC5.35□□□□□ -1.55
CLCN1P35523 AL354714.3-201ENST00000447284 493 ntBASIC5.35□□□□□ -1.55
CLCN1P35523 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.35□□□□□ -1.55
CLCN1P35523 AC008953.1-201ENST00000497334 318 ntBASIC5.35□□□□□ -1.55
CLCN1P35523 MIR3145-201ENST00000580727 82 ntBASIC5.35□□□□□ -1.55
CLCN1P35523 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CLCN1P35523 DLEU2_6.2-201ENST00000620994 136 ntBASIC5.35□□□□□ -1.55
CLCN1P35523 snoU18.1-201ENST00000629629 71 ntBASIC5.35□□□□□ -1.55
CLCN1P35523 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.35□□□□□ -1.55
CLCN1P35523 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.35□□□□□ -1.55
CLCN1P35523 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLCN1P35523 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLCN1P35523 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLCN1P35523 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms