Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RNU7-175P-201ENST00000515915 61 ntBASIC3.89□□□□□ -1.79
HOXC12P31275 RNU6-911P-201ENST00000516523 104 ntBASIC3.89□□□□□ -1.79
HOXC12P31275 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXC12P31275 AC007458.1-201ENST00000542812 373 ntBASIC3.89□□□□□ -1.79
HOXC12P31275 SYF2P1-201ENST00000550658 413 ntBASIC3.89□□□□□ -1.79
HOXC12P31275 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXC12P31275 AL591034.3-201ENST00000605511 685 ntBASIC3.89□□□□□ -1.79
HOXC12P31275 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXC12P31275 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXC12P31275 AC064801.1-201ENST00000612025 407 ntBASIC3.89□□□□□ -1.79
HOXC12P31275 MIR6134-201ENST00000617606 109 ntBASIC3.89□□□□□ -1.79
HOXC12P31275 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HOXC12P31275 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXC12P31275 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXC12P31275 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXC12P31275 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC12P31275 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC12P31275 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
HOXC12P31275 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC12P31275 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
HOXC12P31275 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC12P31275 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HOXC12P31275 RNU6-270P-201ENST00000364131 105 ntBASIC3.88□□□□□ -1.79
HOXC12P31275 RNU1-44P-201ENST00000384453 163 ntBASIC3.88□□□□□ -1.79
HOXC12P31275 MIR659-201ENST00000384963 97 ntBASIC3.88□□□□□ -1.79
HOXC12P31275 MIR190B-201ENST00000401119 79 ntBASIC3.88□□□□□ -1.79
HOXC12P31275 AL591034.1-201ENST00000407447 340 ntBASIC3.88□□□□□ -1.79
HOXC12P31275 RNA5SP44-201ENST00000410446 133 ntBASIC3.88□□□□□ -1.79
HOXC12P31275 RN7SKP53-201ENST00000411337 315 ntBASIC3.88□□□□□ -1.79
HOXC12P31275 RAB9AP3-201ENST00000412737 573 ntBASIC3.88□□□□□ -1.79
HOXC12P31275 AC099548.1-201ENST00000421443 426 ntBASIC3.88□□□□□ -1.79
HOXC12P31275 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC12P31275 RAB9AP1-201ENST00000449393 573 ntBASIC3.88□□□□□ -1.79
HOXC12P31275 RPL26P9-201ENST00000457466 433 ntBASIC3.88□□□□□ -1.79
HOXC12P31275 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC12P31275 RN7SL98P-201ENST00000462271 300 ntBASIC3.88□□□□□ -1.79
HOXC12P31275 RPS27AP10-201ENST00000496103 208 ntBASIC3.88□□□□□ -1.79
HOXC12P31275 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC12P31275 RNY3P15-201ENST00000516297 97 ntBASIC3.88□□□□□ -1.79
HOXC12P31275 MIR3668-201ENST00000582138 75 ntBASIC3.88□□□□□ -1.79
HOXC12P31275 AL451007.1-201ENST00000595491 289 ntBASIC3.88□□□□□ -1.79
HOXC12P31275 AL390123.1-201ENST00000603216 237 ntBASIC3.88□□□□□ -1.79
HOXC12P31275 MIR8058-201ENST00000615737 89 ntBASIC3.88□□□□□ -1.79
HOXC12P31275 uc_338.13-201ENST00000618243 179 ntBASIC3.88□□□□□ -1.79
HOXC12P31275 AL159153.1-201ENST00000619688 317 ntBASIC3.88□□□□□ -1.79
HOXC12P31275 MIR8062-201ENST00000621515 85 ntBASIC3.88□□□□□ -1.79
HOXC12P31275 AC140479.6-201ENST00000633535 357 ntBASIC3.88□□□□□ -1.79
HOXC12P31275 MTND5P7-201ENST00000413558 1798 ntBASIC3.88□□□□□ -1.79
HOXC12P31275 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXC12P31275 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC12P31275 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXC12P31275 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
HOXC12P31275 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
HOXC12P31275 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HOXC12P31275 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
HOXC12P31275 RNU6-858P-201ENST00000362436 107 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 Y_RNA.214-201ENST00000364201 112 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 Y_RNA.222-201ENST00000364264 102 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 RNU6-1280P-201ENST00000365211 107 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 RNU1-100P-201ENST00000365255 165 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 RNU6-1318P-201ENST00000365389 103 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 RNU6-708P-201ENST00000384217 107 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 Y_RNA.476-201ENST00000384347 108 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 MIR591-201ENST00000385290 95 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HOXC12P31275 HSPE1P12-201ENST00000412576 301 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 TMSB10P2-201ENST00000416049 131 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 ELOCP20-201ENST00000422460 345 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXC12P31275 AC243964.1-201ENST00000441814 261 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 AL513124.1-201ENST00000450410 614 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXC12P31275 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXC12P31275 MTND4LP22-201ENST00000508209 276 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 PARP4P3-201ENST00000510265 317 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXC12P31275 RNU6-397P-201ENST00000516226 104 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 Y_RNA.706-201ENST00000516933 99 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXC12P31275 AC091144.1-201ENST00000519573 138 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 MRPS36P4-201ENST00000534436 298 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 AC011602.1-201ENST00000546484 331 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 NACAP3-201ENST00000552100 481 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 AC104581.2-201ENST00000572227 430 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 AC060766.3-201ENST00000591442 263 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 AC125232.2-201ENST00000592457 143 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 AC113403.1-201ENST00000604910 193 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 AC007546.2-201ENST00000623996 360 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.87□□□□□ -1.79
HOXC12P31275 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXC12P31275 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXC12P31275 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXC12P31275 AP001486.2-201ENST00000561652 5113 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXC12P31275 AC233981.2-201ENST00000611524 1614 ntBASIC3.87□□□□□ -1.79
HOXC12P31275 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXC12P31275 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXC12P31275 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
HOXC12P31275 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXC12P31275 SNORD56.1-201ENST00000362913 68 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms