Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 RPS3AP4-201ENST00000555161 764 ntBASIC2.06□□□□□ -2.08
HOXA9P31269 AL391261.3-201ENST00000557194 520 ntBASIC2.06□□□□□ -2.08
HOXA9P31269 MIR5571-201ENST00000577998 113 ntBASIC2.06□□□□□ -2.08
HOXA9P31269 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.06□□□□□ -2.08
HOXA9P31269 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.06□□□□□ -2.08
HOXA9P31269 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.06□□□□□ -2.08
HOXA9P31269 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.06□□□□□ -2.08
HOXA9P31269 AC025165.5-201ENST00000602802 578 ntBASIC2.06□□□□□ -2.08
HOXA9P31269 AP000942.3-201ENST00000603702 160 ntBASIC2.06□□□□□ -2.08
HOXA9P31269 AL161798.1-201ENST00000604630 131 ntBASIC2.06□□□□□ -2.08
HOXA9P31269 AC004805.2-201ENST00000605382 482 ntBASIC2.06□□□□□ -2.08
HOXA9P31269 AL451064.1-201ENST00000607718 471 ntBASIC2.06□□□□□ -2.08
HOXA9P31269 AC008498.1-201ENST00000613012 531 ntBASIC2.06□□□□□ -2.08
HOXA9P31269 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.06□□□□□ -2.08
HOXA9P31269 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.06□□□□□ -2.08
HOXA9P31269 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.05□□□□□ -2.08
HOXA9P31269 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.05□□□□□ -2.08
HOXA9P31269 UBE2L2-201ENST00000254302 429 ntBASIC2.05□□□□□ -2.08
HOXA9P31269 RNU6-188P-201ENST00000364207 107 ntBASIC2.05□□□□□ -2.08
HOXA9P31269 RNU6-512P-201ENST00000364438 103 ntBASIC2.05□□□□□ -2.08
HOXA9P31269 RPS3AP3-201ENST00000411933 242 ntBASIC2.05□□□□□ -2.08
HOXA9P31269 CYCSP48-201ENST00000417124 323 ntBASIC2.05□□□□□ -2.08
HOXA9P31269 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.05□□□□□ -2.08
HOXA9P31269 MTND2P4-201ENST00000445034 1004 ntBASIC2.05□□□□□ -2.08
HOXA9P31269 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.05□□□□□ -2.08
HOXA9P31269 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.05□□□□□ -2.08
HOXA9P31269 RNA5SP269-201ENST00000459032 137 ntBASIC2.05□□□□□ -2.08
HOXA9P31269 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.05□□□□□ -2.08
HOXA9P31269 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.05□□□□□ -2.08
HOXA9P31269 Y_RNA.672-201ENST00000516289 104 ntBASIC2.05□□□□□ -2.08
HOXA9P31269 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.05□□□□□ -2.08
HOXA9P31269 Y_RNA.688-201ENST00000516565 95 ntBASIC2.05□□□□□ -2.08
HOXA9P31269 RNA5SP290-201ENST00000517133 127 ntBASIC2.05□□□□□ -2.08
HOXA9P31269 RNA5SP291-201ENST00000517222 105 ntBASIC2.05□□□□□ -2.08
HOXA9P31269 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.05□□□□□ -2.08
HOXA9P31269 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.05□□□□□ -2.08
HOXA9P31269 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
HOXA9P31269 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.05□□□□□ -2.08
HOXA9P31269 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.05□□□□□ -2.08
HOXA9P31269 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.05□□□□□ -2.08
HOXA9P31269 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.05□□□□□ -2.08
HOXA9P31269 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.05□□□□□ -2.08
HOXA9P31269 BNIP3P8-201ENST00000597863 560 ntBASIC2.05□□□□□ -2.08
HOXA9P31269 AC110760.3-201ENST00000598794 467 ntBASIC2.05□□□□□ -2.08
HOXA9P31269 CLIC4P2-201ENST00000601934 717 ntBASIC2.05□□□□□ -2.08
HOXA9P31269 MTND4LP5-201ENST00000605152 292 ntBASIC2.05□□□□□ -2.08
HOXA9P31269 AC068276.1-201ENST00000605793 379 ntBASIC2.05□□□□□ -2.08
HOXA9P31269 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
HOXA9P31269 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.04□□□□□ -2.08
HOXA9P31269 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
HOXA9P31269 RNU1-17P-201ENST00000363022 152 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 RNU6-884P-201ENST00000363889 107 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 Y_RNA.245-201ENST00000364493 95 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 RNU6-39P-201ENST00000384344 107 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 RNY3P10-201ENST00000384764 102 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 SNORA40.3-201ENST00000390964 122 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 CIR1P3-201ENST00000405137 479 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 HMGN1P14-201ENST00000412459 517 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 RAC1P6-201ENST00000423911 575 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 ISCA1P1-201ENST00000426679 387 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 AC027124.2-201ENST00000428249 105 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 AC104850.1-201ENST00000435940 476 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.04□□□□□ -2.08
HOXA9P31269 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.04□□□□□ -2.08
HOXA9P31269 USP9YP15-201ENST00000442391 422 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 NEFMP1-201ENST00000443423 1006 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 RPL23AP7-203ENST00000449021 469 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 GAPDHP17-201ENST00000449858 1001 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 FABP5P15-201ENST00000453566 214 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 KPNA2P1-201ENST00000458289 1591 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 RNU6-717P-201ENST00000459076 104 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 SNORD97-201ENST00000459187 142 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 AC022493.1-201ENST00000492984 337 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 FAM92A1P2-202ENST00000504766 877 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.04□□□□□ -2.08
HOXA9P31269 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.04□□□□□ -2.08
HOXA9P31269 RNU6-1092P-201ENST00000516955 87 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 RNU6-1220P-201ENST00000517126 108 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.04□□□□□ -2.08
HOXA9P31269 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.04□□□□□ -2.08
HOXA9P31269 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.04□□□□□ -2.08
HOXA9P31269 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
HOXA9P31269 MIR3167-201ENST00000579623 85 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 AP005136.1-201ENST00000579765 429 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 MIR5089-201ENST00000580047 84 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 HMGN2P15-201ENST00000585707 270 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 AL109809.4-201ENST00000603520 2185 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 AC073114.1-201ENST00000612027 490 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.04□□□□□ -2.08
HOXA9P31269 U2.21-201ENST00000637295 81 ntBASIC2.04□□□□□ -2.08
HOXA9P31269 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
HOXA9P31269 FGF7P2-201ENST00000332473 296 ntBASIC2.03□□□□□ -2.08
HOXA9P31269 SNORD56.2-201ENST00000363242 71 ntBASIC2.03□□□□□ -2.08
HOXA9P31269 RNU6-288P-201ENST00000363690 104 ntBASIC2.03□□□□□ -2.08
HOXA9P31269 RNU6-960P-201ENST00000364056 120 ntBASIC2.03□□□□□ -2.08
HOXA9P31269 RNA5SP37-201ENST00000365420 130 ntBASIC2.03□□□□□ -2.08
HOXA9P31269 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HOXA9P31269 RNU6-1083P-201ENST00000384022 107 ntBASIC2.03□□□□□ -2.08
HOXA9P31269 SNORA46.1-201ENST00000391069 153 ntBASIC2.03□□□□□ -2.08
HOXA9P31269 RPL23AP32-201ENST00000395315 459 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms