Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 MIR4276-201ENST00000584832 70 ntBASIC3.92□□□□□ -1.78
CNGA1P29973 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.92□□□□□ -1.78
CNGA1P29973 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.92□□□□□ -1.78
CNGA1P29973 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.92□□□□□ -1.78
CNGA1P29973 SCARNA4-202ENST00000625402 129 ntBASIC3.92□□□□□ -1.78
CNGA1P29973 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CNGA1P29973 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CNGA1P29973 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CNGA1P29973 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CNGA1P29973 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNGA1P29973 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNGA1P29973 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CNGA1P29973 U3.39-201ENST00000408569 239 ntBASIC3.91□□□□□ -1.78
CNGA1P29973 AC023141.4-201ENST00000412031 328 ntBASIC3.91□□□□□ -1.78
CNGA1P29973 AC006989.1-201ENST00000427212 131 ntBASIC3.91□□□□□ -1.78
CNGA1P29973 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.91□□□□□ -1.78
CNGA1P29973 RPL32P28-201ENST00000443577 397 ntBASIC3.91□□□□□ -1.78
CNGA1P29973 MTND1P11-201ENST00000456661 876 ntBASIC3.91□□□□□ -1.78
CNGA1P29973 RN7SL330P-201ENST00000469709 307 ntBASIC3.91□□□□□ -1.78
CNGA1P29973 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.91□□□□□ -1.78
CNGA1P29973 RNA5SP341-201ENST00000516261 117 ntBASIC3.91□□□□□ -1.78
CNGA1P29973 Y_RNA.691-201ENST00000516611 103 ntBASIC3.91□□□□□ -1.78
CNGA1P29973 RNU6-1332P-201ENST00000516666 104 ntBASIC3.91□□□□□ -1.78
CNGA1P29973 AC021739.1-201ENST00000559631 174 ntBASIC3.91□□□□□ -1.78
CNGA1P29973 AC100830.2-201ENST00000581636 240 ntBASIC3.91□□□□□ -1.78
CNGA1P29973 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CNGA1P29973 OR1M4P-201ENST00000589199 287 ntBASIC3.91□□□□□ -1.78
CNGA1P29973 AL162713.1-201ENST00000604480 262 ntBASIC3.91□□□□□ -1.78
CNGA1P29973 AC004852.3-201ENST00000614131 326 ntBASIC3.91□□□□□ -1.78
CNGA1P29973 AL161629.2-201ENST00000615347 275 ntBASIC3.91□□□□□ -1.78
CNGA1P29973 ATP5A1P2-202ENST00000616464 443 ntBASIC3.91□□□□□ -1.78
CNGA1P29973 TPTEP1-208ENST00000636884 213 ntBASIC3.91□□□□□ -1.78
CNGA1P29973 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CNGA1P29973 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.91□□□□□ -1.78
CNGA1P29973 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNGA1P29973 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CNGA1P29973 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CNGA1P29973 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.91□□□□□ -1.78
CNGA1P29973 Z83843.1-201ENST00000604070 3685 ntBASIC3.9□□□□□ -1.78
CNGA1P29973 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.9□□□□□ -1.78
CNGA1P29973 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
CNGA1P29973 RNU6-37P-201ENST00000362692 107 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 RNU6-11P-201ENST00000364234 107 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 RNU6-7-201ENST00000364784 107 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 RNU6-8-201ENST00000365467 107 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 RNU6-25P-201ENST00000383873 107 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 RNU6-1-201ENST00000383898 107 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 RNU6-48P-201ENST00000384161 107 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 RNU6-36P-201ENST00000384172 107 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 RNU6-4P-201ENST00000384205 107 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 RNU6-5P-201ENST00000384238 107 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 RNU6-3P-201ENST00000384314 107 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 RNU6-16P-201ENST00000384385 107 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 RNU6-15P-201ENST00000384534 107 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 RNU6-2-201ENST00000384627 107 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 RNU6-29P-201ENST00000384637 107 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 RNU6-9-201ENST00000384776 107 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 RNU6-33P-201ENST00000384793 107 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 EI24P2-201ENST00000397776 1076 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 SNORD56-201ENST00000413522 71 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 AC245291.1-201ENST00000419501 328 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.9□□□□□ -1.79
CNGA1P29973 RPL7P37-201ENST00000425095 738 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 AL365496.1-201ENST00000426885 215 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 RPS15AP5-201ENST00000436276 388 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 HMGB1P18-201ENST00000438801 619 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.9□□□□□ -1.79
CNGA1P29973 snoU109.2-201ENST00000459316 135 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.9□□□□□ -1.79
CNGA1P29973 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.9□□□□□ -1.79
CNGA1P29973 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.9□□□□□ -1.79
CNGA1P29973 AC022634.1-201ENST00000520765 532 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.9□□□□□ -1.79
CNGA1P29973 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.9□□□□□ -1.79
CNGA1P29973 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.9□□□□□ -1.79
CNGA1P29973 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.9□□□□□ -1.79
CNGA1P29973 AC008121.1-201ENST00000603244 268 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 AP000787.2-201ENST00000604432 568 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 RNU6-6P-201ENST00000606623 107 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 RMST_7.1-201ENST00000621935 268 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 AC099654.5-201ENST00000636479 350 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 MIR7153-201ENST00000637758 57 ntBASIC3.9□□□□□ -1.79
CNGA1P29973 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CNGA1P29973 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CNGA1P29973 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.89□□□□□ -1.79
CNGA1P29973 RNU6-283P-201ENST00000364788 107 ntBASIC3.89□□□□□ -1.79
CNGA1P29973 SNORD116-11-201ENST00000383882 92 ntBASIC3.89□□□□□ -1.79
CNGA1P29973 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.89□□□□□ -1.79
CNGA1P29973 NCOR1P3-201ENST00000420479 303 ntBASIC3.89□□□□□ -1.79
CNGA1P29973 AC093019.1-201ENST00000443135 252 ntBASIC3.89□□□□□ -1.79
CNGA1P29973 HIGD1AP2-201ENST00000446367 280 ntBASIC3.89□□□□□ -1.79
CNGA1P29973 Z75741.1-201ENST00000446793 314 ntBASIC3.89□□□□□ -1.79
CNGA1P29973 AC104472.2-201ENST00000469035 601 ntBASIC3.89□□□□□ -1.79
CNGA1P29973 MTCO1P29-201ENST00000496868 288 ntBASIC3.89□□□□□ -1.79
CNGA1P29973 AC008526.1-201ENST00000509149 338 ntBASIC3.89□□□□□ -1.79
CNGA1P29973 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.89□□□□□ -1.79
CNGA1P29973 AC113155.1-201ENST00000511141 769 ntBASIC3.89□□□□□ -1.79
CNGA1P29973 RNU6-566P-201ENST00000516790 107 ntBASIC3.89□□□□□ -1.79
CNGA1P29973 RNU6-273P-201ENST00000516937 96 ntBASIC3.89□□□□□ -1.79
CNGA1P29973 AC105029.1-201ENST00000520250 669 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms