Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 MTND4P15-201ENST00000437913 1033 ntBASIC1.14□□□□□ -2.23
COL4A5P29400 MTCO1P53-201ENST00000441633 699 ntBASIC1.14□□□□□ -2.23
COL4A5P29400 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.14□□□□□ -2.23
COL4A5P29400 DUXAP8-207ENST00000456786 622 ntBASIC1.14□□□□□ -2.23
COL4A5P29400 AC026414.1-201ENST00000504046 698 ntBASIC1.14□□□□□ -2.23
COL4A5P29400 AC098591.2-201ENST00000510152 315 ntBASIC1.14□□□□□ -2.23
COL4A5P29400 RNU6-583P-201ENST00000516012 92 ntBASIC1.14□□□□□ -2.23
COL4A5P29400 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.14□□□□□ -2.23
COL4A5P29400 AP003049.1-201ENST00000529418 457 ntBASIC1.14□□□□□ -2.23
COL4A5P29400 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.14□□□□□ -2.23
COL4A5P29400 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.14□□□□□ -2.23
COL4A5P29400 MIR5708-201ENST00000579723 85 ntBASIC1.14□□□□□ -2.23
COL4A5P29400 AC091057.3-201ENST00000602684 733 ntBASIC1.14□□□□□ -2.23
COL4A5P29400 MIR6086-201ENST00000638065 55 ntBASIC1.14□□□□□ -2.23
COL4A5P29400 AL163152.1-201ENST00000642001 374 ntBASIC1.14□□□□□ -2.23
COL4A5P29400 MTND5P9-201ENST00000503854 1755 ntBASIC1.14□□□□□ -2.23
COL4A5P29400 SNORA23-201ENST00000365128 182 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 VTRNA1-3-201ENST00000365645 89 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 RNU6-952P-201ENST00000391164 108 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.13□□□□□ -2.23
COL4A5P29400 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.13□□□□□ -2.23
COL4A5P29400 AC027644.1-201ENST00000419595 298 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 USP9YP26-201ENST00000421008 661 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 AC097463.2-201ENST00000421074 142 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.13□□□□□ -2.23
COL4A5P29400 MTCYBP42-201ENST00000444653 1130 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 RPL23AP35-201ENST00000451906 501 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 RPL23AP3-201ENST00000453844 468 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 CYP2C59P-201ENST00000457790 269 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.13□□□□□ -2.23
COL4A5P29400 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 RNU7-193P-201ENST00000516723 65 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.13□□□□□ -2.23
COL4A5P29400 AP005597.4-201ENST00000526762 229 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 SLC2A13P1-201ENST00000531560 322 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.13□□□□□ -2.23
COL4A5P29400 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.13□□□□□ -2.23
COL4A5P29400 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
COL4A5P29400 AL353997.4-201ENST00000586196 166 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.13□□□□□ -2.23
COL4A5P29400 MTCYBP22-201ENST00000603788 447 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 MIR8087-201ENST00000612745 78 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.13□□□□□ -2.23
COL4A5P29400 AC091925.1-201ENST00000623204 462 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.13□□□□□ -2.23
COL4A5P29400 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
COL4A5P29400 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
COL4A5P29400 RNU1-72P-201ENST00000362976 153 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 MIR150-201ENST00000385048 84 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 MIR147B-201ENST00000390185 80 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 TIMM9P2-201ENST00000419324 266 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 MRPS36P1-201ENST00000421291 307 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 PTGES3P4-201ENST00000426243 356 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.13□□□□□ -2.23
COL4A5P29400 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.13□□□□□ -2.23
COL4A5P29400 AL353689.1-201ENST00000438895 199 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.13□□□□□ -2.23
COL4A5P29400 RPL18AP17-201ENST00000455326 198 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.13□□□□□ -2.23
COL4A5P29400 RNU6-390P-201ENST00000516259 103 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 RNU5B-3P-201ENST00000516601 115 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 RNU6-143P-201ENST00000516942 93 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 RNU6-714P-201ENST00000516963 103 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 LRRC6P1-201ENST00000532188 885 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 MRPS36P5-201ENST00000551909 298 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.13□□□□□ -2.23
COL4A5P29400 AL096840.1-201ENST00000603287 93 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 AP000676.3-201ENST00000623299 569 ntBASIC1.13□□□□□ -2.23
COL4A5P29400 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
COL4A5P29400 RNU6-486P-201ENST00000363116 107 ntBASIC1.12□□□□□ -2.23
COL4A5P29400 AL161449.1-201ENST00000414531 1199 ntBASIC1.12□□□□□ -2.23
COL4A5P29400 RPL21P90-201ENST00000415692 466 ntBASIC1.12□□□□□ -2.23
COL4A5P29400 AC098934.3-201ENST00000430450 190 ntBASIC1.12□□□□□ -2.23
COL4A5P29400 RSL24D1P8-201ENST00000434442 492 ntBASIC1.12□□□□□ -2.23
COL4A5P29400 RPS15AP9-201ENST00000439856 381 ntBASIC1.12□□□□□ -2.23
COL4A5P29400 AC013267.1-201ENST00000458227 267 ntBASIC1.12□□□□□ -2.23
COL4A5P29400 AC117503.1-201ENST00000472241 394 ntBASIC1.12□□□□□ -2.23
COL4A5P29400 AC107032.1-201ENST00000485945 480 ntBASIC1.12□□□□□ -2.23
COL4A5P29400 HMGB3P17-201ENST00000504195 649 ntBASIC1.12□□□□□ -2.23
COL4A5P29400 SNORA31.6-201ENST00000516241 130 ntBASIC1.12□□□□□ -2.23
COL4A5P29400 LINC00933-203ENST00000559812 219 ntBASIC1.12□□□□□ -2.23
COL4A5P29400 AC012213.3-201ENST00000577199 777 ntBASIC1.12□□□□□ -2.23
COL4A5P29400 BNIP3P23-201ENST00000599655 511 ntBASIC1.12□□□□□ -2.23
COL4A5P29400 FAM71BP1-201ENST00000604431 523 ntBASIC1.12□□□□□ -2.23
COL4A5P29400 AL138963.2-201ENST00000605137 226 ntBASIC1.12□□□□□ -2.23
COL4A5P29400 SNORD14A-201ENST00000606526 91 ntBASIC1.12□□□□□ -2.23
COL4A5P29400 AL589743.7-201ENST00000612637 233 ntBASIC1.12□□□□□ -2.23
COL4A5P29400 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.12□□□□□ -2.23
COL4A5P29400 NACAP2-201ENST00000318548 624 ntBASIC1.11□□□□□ -2.23
COL4A5P29400 AL356379.1-201ENST00000414105 126 ntBASIC1.11□□□□□ -2.23
COL4A5P29400 UBE2FP1-201ENST00000416536 447 ntBASIC1.11□□□□□ -2.23
COL4A5P29400 AL449283.1-202ENST00000418249 604 ntBASIC1.11□□□□□ -2.23
COL4A5P29400 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.11□□□□□ -2.23
COL4A5P29400 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.11□□□□□ -2.23
COL4A5P29400 ELOCP30-201ENST00000447108 299 ntBASIC1.11□□□□□ -2.23
COL4A5P29400 AC012308.1-201ENST00000451232 178 ntBASIC1.11□□□□□ -2.23
COL4A5P29400 RNU7-59P-201ENST00000459101 61 ntBASIC1.11□□□□□ -2.23
COL4A5P29400 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.11□□□□□ -2.23
COL4A5P29400 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms