Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL117187.1-201ENST00000555482 181 ntBASIC3.53□□□□□ -1.84
CD40P25942 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.53□□□□□ -1.84
CD40P25942 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.53□□□□□ -1.84
CD40P25942 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CD40P25942 AC025627.2-201ENST00000576220 160 ntBASIC3.53□□□□□ -1.84
CD40P25942 AC113195.1-201ENST00000579952 141 ntBASIC3.53□□□□□ -1.84
CD40P25942 MIR5188-201ENST00000583467 113 ntBASIC3.53□□□□□ -1.84
CD40P25942 AC060766.3-201ENST00000591442 263 ntBASIC3.53□□□□□ -1.84
CD40P25942 AL132822.1-201ENST00000617063 513 ntBASIC3.53□□□□□ -1.84
CD40P25942 AC087588.2-201ENST00000617667 426 ntBASIC3.53□□□□□ -1.84
CD40P25942 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.53□□□□□ -1.84
CD40P25942 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
CD40P25942 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CD40P25942 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CD40P25942 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.53□□□□□ -1.84
CD40P25942 AC032011.1-201ENST00000611703 1549 ntBASIC3.53□□□□□ -1.84
CD40P25942 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CD40P25942 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.53□□□□□ -1.84
CD40P25942 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CD40P25942 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CD40P25942 AC004944.1-201ENST00000517807 3059 ntBASIC3.52□□□□□ -1.85
CD40P25942 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CD40P25942 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
CD40P25942 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CD40P25942 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CD40P25942 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CD40P25942 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CD40P25942 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CD40P25942 SNORD35B-201ENST00000363660 87 ntBASIC3.52□□□□□ -1.85
CD40P25942 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CD40P25942 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.52□□□□□ -1.85
CD40P25942 RNU6-968P-201ENST00000384076 107 ntBASIC3.52□□□□□ -1.85
CD40P25942 Y_RNA.557-201ENST00000384680 107 ntBASIC3.52□□□□□ -1.85
CD40P25942 MIR544A-201ENST00000384855 91 ntBASIC3.52□□□□□ -1.85
CD40P25942 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CD40P25942 RNU6-101P-201ENST00000410323 104 ntBASIC3.52□□□□□ -1.85
CD40P25942 AL691449.1-201ENST00000426570 421 ntBASIC3.52□□□□□ -1.85
CD40P25942 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.52□□□□□ -1.85
CD40P25942 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.52□□□□□ -1.85
CD40P25942 RN7SKP210-201ENST00000459176 261 ntBASIC3.52□□□□□ -1.85
CD40P25942 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.52□□□□□ -1.85
CD40P25942 RNU7-143P-201ENST00000516781 65 ntBASIC3.52□□□□□ -1.85
CD40P25942 Y_RNA.721-201ENST00000517207 102 ntBASIC3.52□□□□□ -1.85
CD40P25942 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.52□□□□□ -1.85
CD40P25942 AC144568.1-201ENST00000520139 137 ntBASIC3.52□□□□□ -1.85
CD40P25942 IFITM8P-201ENST00000522529 394 ntBASIC3.52□□□□□ -1.85
CD40P25942 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.52□□□□□ -1.85
CD40P25942 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.52□□□□□ -1.85
CD40P25942 AC006600.1-201ENST00000572529 153 ntBASIC3.52□□□□□ -1.85
CD40P25942 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.52□□□□□ -1.85
CD40P25942 AL606490.9-201ENST00000603331 271 ntBASIC3.52□□□□□ -1.85
CD40P25942 7SK.7-201ENST00000603504 247 ntBASIC3.52□□□□□ -1.85
CD40P25942 MIR6500-201ENST00000622700 86 ntBASIC3.52□□□□□ -1.85
CD40P25942 AC138305.3-201ENST00000624988 240 ntBASIC3.52□□□□□ -1.85
CD40P25942 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.52□□□□□ -1.85
CD40P25942 MIR3529-201ENST00000637713 78 ntBASIC3.52□□□□□ -1.85
CD40P25942 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.52□□□□□ -1.85
CD40P25942 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CD40P25942 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CD40P25942 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CD40P25942 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CD40P25942 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CD40P25942 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
CD40P25942 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.52□□□□□ -1.85
CD40P25942 AC233981.2-201ENST00000611524 1614 ntBASIC3.52□□□□□ -1.85
CD40P25942 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CD40P25942 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
CD40P25942 Y_RNA.153-201ENST00000363615 91 ntBASIC3.51□□□□□ -1.85
CD40P25942 Y_RNA.405-201ENST00000383979 100 ntBASIC3.51□□□□□ -1.85
CD40P25942 Y_RNA.451-201ENST00000384200 100 ntBASIC3.51□□□□□ -1.85
CD40P25942 RNU6-843P-201ENST00000384454 104 ntBASIC3.51□□□□□ -1.85
CD40P25942 Y_RNA.524-201ENST00000384564 100 ntBASIC3.51□□□□□ -1.85
CD40P25942 Y_RNA.561-201ENST00000384694 100 ntBASIC3.51□□□□□ -1.85
CD40P25942 RNU6-823P-201ENST00000391042 103 ntBASIC3.51□□□□□ -1.85
CD40P25942 MIR548F4-201ENST00000408515 105 ntBASIC3.51□□□□□ -1.85
CD40P25942 RNU6-1077P-201ENST00000410506 102 ntBASIC3.51□□□□□ -1.85
CD40P25942 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CD40P25942 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.51□□□□□ -1.85
CD40P25942 AL513124.1-201ENST00000450410 614 ntBASIC3.51□□□□□ -1.85
CD40P25942 AL031183.1-201ENST00000457667 207 ntBASIC3.51□□□□□ -1.85
CD40P25942 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.51□□□□□ -1.85
CD40P25942 RN7SL132P-201ENST00000478131 296 ntBASIC3.51□□□□□ -1.85
CD40P25942 AC097462.2-201ENST00000504623 481 ntBASIC3.51□□□□□ -1.85
CD40P25942 SNORA31.1-201ENST00000515993 133 ntBASIC3.51□□□□□ -1.85
CD40P25942 SNORA31.5-201ENST00000516190 133 ntBASIC3.51□□□□□ -1.85
CD40P25942 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.51□□□□□ -1.85
CD40P25942 AC008269.2-201ENST00000561915 1105 ntBASIC3.51□□□□□ -1.85
CD40P25942 MTND6P33-201ENST00000571794 183 ntBASIC3.51□□□□□ -1.85
CD40P25942 MIR6868-201ENST00000611215 58 ntBASIC3.51□□□□□ -1.85
CD40P25942 AC064801.1-201ENST00000612025 407 ntBASIC3.51□□□□□ -1.85
CD40P25942 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.51□□□□□ -1.85
CD40P25942 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CD40P25942 AL138825.1-201ENST00000618587 192 ntBASIC3.51□□□□□ -1.85
CD40P25942 AL136164.4-201ENST00000625013 2135 ntBASIC3.51□□□□□ -1.85
CD40P25942 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CD40P25942 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.51□□□□□ -1.85
CD40P25942 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.5□□□□□ -1.85
CD40P25942 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CD40P25942 UBE3AP2-201ENST00000429033 2259 ntBASIC3.5□□□□□ -1.85
CD40P25942 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms