Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 MIR3144-201ENST00000579460 79 ntBASIC4.53□□□□□ -1.68
BMP3P12645 AC012442.3-202ENST00000636742 206 ntBASIC4.53□□□□□ -1.68
BMP3P12645 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BMP3P12645 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BMP3P12645 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.53□□□□□ -1.68
BMP3P12645 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BMP3P12645 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.52□□□□□ -1.69
BMP3P12645 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
BMP3P12645 RNA5SP124-201ENST00000362739 110 ntBASIC4.52□□□□□ -1.69
BMP3P12645 Y_RNA.383-201ENST00000383855 97 ntBASIC4.52□□□□□ -1.69
BMP3P12645 RNU6-76P-201ENST00000384060 104 ntBASIC4.52□□□□□ -1.69
BMP3P12645 RNU6-394P-201ENST00000410735 107 ntBASIC4.52□□□□□ -1.69
BMP3P12645 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.52□□□□□ -1.69
BMP3P12645 HSPD1P21-201ENST00000436541 245 ntBASIC4.52□□□□□ -1.69
BMP3P12645 HMGB1P37-201ENST00000439613 609 ntBASIC4.52□□□□□ -1.69
BMP3P12645 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC4.52□□□□□ -1.69
BMP3P12645 SCARNA14-201ENST00000516903 136 ntBASIC4.52□□□□□ -1.69
BMP3P12645 RNU6-1315P-201ENST00000517187 99 ntBASIC4.52□□□□□ -1.69
BMP3P12645 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.52□□□□□ -1.69
BMP3P12645 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
BMP3P12645 AC011921.3-201ENST00000605540 361 ntBASIC4.52□□□□□ -1.69
BMP3P12645 AC097372.5-201ENST00000623665 376 ntBASIC4.52□□□□□ -1.69
BMP3P12645 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.52□□□□□ -1.69
BMP3P12645 AC112200.1-201ENST00000625015 234 ntBASIC4.52□□□□□ -1.69
BMP3P12645 MIR4496-201ENST00000635896 61 ntBASIC4.52□□□□□ -1.69
BMP3P12645 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
BMP3P12645 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.52□□□□□ -1.69
BMP3P12645 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
BMP3P12645 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
BMP3P12645 AC011266.1-201ENST00000624119 3569 ntBASIC4.52□□□□□ -1.69
BMP3P12645 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
BMP3P12645 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
BMP3P12645 UBE2L2-201ENST00000254302 429 ntBASIC4.51□□□□□ -1.69
BMP3P12645 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BMP3P12645 RNU4-90P-201ENST00000362773 141 ntBASIC4.51□□□□□ -1.69
BMP3P12645 RNU6-1290P-201ENST00000362957 109 ntBASIC4.51□□□□□ -1.69
BMP3P12645 Y_RNA.240-201ENST00000364469 95 ntBASIC4.51□□□□□ -1.69
BMP3P12645 RNU6-1117P-201ENST00000384525 104 ntBASIC4.51□□□□□ -1.69
BMP3P12645 AL033519.2-201ENST00000403958 392 ntBASIC4.51□□□□□ -1.69
BMP3P12645 RAB9AP3-201ENST00000412737 573 ntBASIC4.51□□□□□ -1.69
BMP3P12645 AL117339.3-201ENST00000418733 162 ntBASIC4.51□□□□□ -1.69
BMP3P12645 AC008065.1-201ENST00000428525 348 ntBASIC4.51□□□□□ -1.69
BMP3P12645 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.51□□□□□ -1.69
BMP3P12645 PIGFP3-201ENST00000441918 722 ntBASIC4.51□□□□□ -1.69
BMP3P12645 RAB9AP1-201ENST00000449393 573 ntBASIC4.51□□□□□ -1.69
BMP3P12645 RNU6-927P-201ENST00000516199 100 ntBASIC4.51□□□□□ -1.69
BMP3P12645 CASP1P1-201ENST00000526345 212 ntBASIC4.51□□□□□ -1.69
BMP3P12645 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.51□□□□□ -1.69
BMP3P12645 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.51□□□□□ -1.69
BMP3P12645 MIR4444-1-201ENST00000581696 74 ntBASIC4.51□□□□□ -1.69
BMP3P12645 MIR4444-2-201ENST00000584390 74 ntBASIC4.51□□□□□ -1.69
BMP3P12645 AL078605.1-201ENST00000603529 500 ntBASIC4.51□□□□□ -1.69
BMP3P12645 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.51□□□□□ -1.69
BMP3P12645 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.51□□□□□ -1.69
BMP3P12645 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BMP3P12645 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BMP3P12645 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BMP3P12645 AL161912.2-201ENST00000565707 3007 ntBASIC4.5□□□□□ -1.69
BMP3P12645 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BMP3P12645 Y_RNA.304-201ENST00000365011 112 ntBASIC4.5□□□□□ -1.69
BMP3P12645 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.5□□□□□ -1.69
BMP3P12645 SNORD63-201ENST00000384262 68 ntBASIC4.5□□□□□ -1.69
BMP3P12645 Y_RNA.504-201ENST00000384481 104 ntBASIC4.5□□□□□ -1.69
BMP3P12645 U8.11-201ENST00000384699 133 ntBASIC4.5□□□□□ -1.69
BMP3P12645 U8.12-201ENST00000384701 133 ntBASIC4.5□□□□□ -1.69
BMP3P12645 RNA5SP171-201ENST00000391071 115 ntBASIC4.5□□□□□ -1.69
BMP3P12645 RNU6-712P-201ENST00000410558 100 ntBASIC4.5□□□□□ -1.69
BMP3P12645 RNU2-51P-201ENST00000410708 197 ntBASIC4.5□□□□□ -1.69
BMP3P12645 AL592148.1-201ENST00000413568 445 ntBASIC4.5□□□□□ -1.69
BMP3P12645 GOT2P5-201ENST00000433995 546 ntBASIC4.5□□□□□ -1.69
BMP3P12645 AC069285.2-201ENST00000440210 275 ntBASIC4.5□□□□□ -1.69
BMP3P12645 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.5□□□□□ -1.69
BMP3P12645 U8.18-201ENST00000459285 133 ntBASIC4.5□□□□□ -1.69
BMP3P12645 RPS29P27-201ENST00000463711 170 ntBASIC4.5□□□□□ -1.69
BMP3P12645 GMPSP1-201ENST00000514075 579 ntBASIC4.5□□□□□ -1.69
BMP3P12645 MRPS18CP4-201ENST00000535821 231 ntBASIC4.5□□□□□ -1.69
BMP3P12645 AC103996.1-201ENST00000555468 102 ntBASIC4.5□□□□□ -1.69
BMP3P12645 AL157871.3-201ENST00000557231 293 ntBASIC4.5□□□□□ -1.69
BMP3P12645 MIR4659A-201ENST00000580269 81 ntBASIC4.5□□□□□ -1.69
BMP3P12645 AC104465.1-201ENST00000611365 139 ntBASIC4.5□□□□□ -1.69
BMP3P12645 AC011476.5-201ENST00000615594 130 ntBASIC4.5□□□□□ -1.69
BMP3P12645 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
BMP3P12645 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BMP3P12645 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.5□□□□□ -1.69
BMP3P12645 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BMP3P12645 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.5□□□□□ -1.69
BMP3P12645 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
BMP3P12645 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
BMP3P12645 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
BMP3P12645 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
BMP3P12645 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.49□□□□□ -1.69
BMP3P12645 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
BMP3P12645 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.49□□□□□ -1.69
BMP3P12645 Y_RNA.8-201ENST00000362353 102 ntBASIC4.49□□□□□ -1.69
BMP3P12645 Y_RNA.233-201ENST00000364407 101 ntBASIC4.49□□□□□ -1.69
BMP3P12645 MIR200C-201ENST00000384980 68 ntBASIC4.49□□□□□ -1.69
BMP3P12645 MIR513A2-201ENST00000385249 127 ntBASIC4.49□□□□□ -1.69
BMP3P12645 MIR670-201ENST00000390142 98 ntBASIC4.49□□□□□ -1.69
BMP3P12645 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
BMP3P12645 RPL19P1-201ENST00000411635 428 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms