Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 AP006587.4-201ENST00000526053 529 ntBASIC0.25□□□□□ -2.37
COL6A3P12111 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.25□□□□□ -2.37
COL6A3P12111 AL592221.1-201ENST00000605266 382 ntBASIC0.25□□□□□ -2.37
COL6A3P12111 AL121992.2-201ENST00000606262 256 ntBASIC0.25□□□□□ -2.37
COL6A3P12111 LINC02211-204ENST00000642024 1070 ntBASIC0.25□□□□□ -2.37
COL6A3P12111 RNA5SP391-201ENST00000363456 119 ntBASIC0.25□□□□□ -2.37
COL6A3P12111 MIR320B1-201ENST00000390209 79 ntBASIC0.25□□□□□ -2.37
COL6A3P12111 MIR767-201ENST00000390228 109 ntBASIC0.25□□□□□ -2.37
COL6A3P12111 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.25□□□□□ -2.37
COL6A3P12111 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.25□□□□□ -2.37
COL6A3P12111 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.25□□□□□ -2.37
COL6A3P12111 TRGVB-201ENST00000453257 471 ntBASIC0.25□□□□□ -2.37
COL6A3P12111 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.25□□□□□ -2.37
COL6A3P12111 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC0.25□□□□□ -2.37
COL6A3P12111 HMGB1P22-201ENST00000505315 124 ntBASIC0.25□□□□□ -2.37
COL6A3P12111 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC0.25□□□□□ -2.37
COL6A3P12111 AC108120.2-201ENST00000512973 294 ntBASIC0.25□□□□□ -2.37
COL6A3P12111 RNU6-1191P-201ENST00000516799 107 ntBASIC0.25□□□□□ -2.37
COL6A3P12111 AC006518.2-201ENST00000542513 940 ntBASIC0.25□□□□□ -2.37
COL6A3P12111 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC0.25□□□□□ -2.37
COL6A3P12111 AC040174.2-201ENST00000602701 465 ntBASIC0.25□□□□□ -2.37
COL6A3P12111 AC096586.2-201ENST00000610260 441 ntBASIC0.25□□□□□ -2.37
COL6A3P12111 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC0.25□□□□□ -2.37
COL6A3P12111 AC079395.3-201ENST00000615161 484 ntBASIC0.25□□□□□ -2.37
COL6A3P12111 MIR6738-201ENST00000619620 64 ntBASIC0.25□□□□□ -2.37
COL6A3P12111 RMST_7.1-201ENST00000621935 268 ntBASIC0.25□□□□□ -2.37
COL6A3P12111 RNU6-657P-201ENST00000383904 107 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 RNY4P36-201ENST00000391116 96 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 AL606923.1-201ENST00000406616 190 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC0.24□□□□□ -2.37
COL6A3P12111 VN1R36P-201ENST00000414936 291 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 RPS15AP40-201ENST00000419621 391 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 snoU13.4-201ENST00000458916 104 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 RNU6-362P-201ENST00000516736 90 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 UCA1.1-201ENST00000620952 75 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 GDI2P1-201ENST00000429312 1336 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 AC016716.1-201ENST00000265882 708 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 SNORA32.1-201ENST00000364514 115 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.24□□□□□ -2.37
COL6A3P12111 Y_RNA.582-201ENST00000391023 95 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 MTCYBP29-201ENST00000436327 1006 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 ANKRD26P4-201ENST00000455755 950 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.24□□□□□ -2.37
COL6A3P12111 AC138853.1-201ENST00000503549 823 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.24□□□□□ -2.37
COL6A3P12111 RNU5F-8P-201ENST00000515941 111 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 SNORA31.13-201ENST00000516624 135 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC0.24□□□□□ -2.37
COL6A3P12111 MIR4764-201ENST00000580680 88 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 AL713998.2-201ENST00000604538 1198 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
COL6A3P12111 RNU6-25P-201ENST00000383873 107 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 RNU6-29P-201ENST00000384637 107 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 Y_RNA.562-201ENST00000384695 113 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 PIGPP2-201ENST00000411569 458 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.24□□□□□ -2.37
COL6A3P12111 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.24□□□□□ -2.37
COL6A3P12111 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.24□□□□□ -2.37
COL6A3P12111 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC0.24□□□□□ -2.37
COL6A3P12111 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.24□□□□□ -2.37
COL6A3P12111 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.24□□□□□ -2.37
COL6A3P12111 SCARNA8-201ENST00000515924 131 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 RNU6-27P-201ENST00000516146 107 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 RNU7-193P-201ENST00000516723 65 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC0.24□□□□□ -2.37
COL6A3P12111 MRPS36P4-201ENST00000534436 298 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 AL133241.1-201ENST00000556832 487 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 MIR3115-201ENST00000577915 68 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC0.24□□□□□ -2.37
COL6A3P12111 MIR8064-201ENST00000612863 90 ntBASIC0.24□□□□□ -2.37
COL6A3P12111 Y_RNA.446-201ENST00000384178 104 ntBASIC0.23□□□□□ -2.37
COL6A3P12111 AC009518.2-201ENST00000418056 731 ntBASIC0.23□□□□□ -2.37
COL6A3P12111 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.23□□□□□ -2.37
COL6A3P12111 RPL21P111-201ENST00000418453 477 ntBASIC0.23□□□□□ -2.37
COL6A3P12111 RPL7P29-201ENST00000437151 728 ntBASIC0.23□□□□□ -2.37
COL6A3P12111 AC109327.2-201ENST00000448339 378 ntBASIC0.23□□□□□ -2.37
COL6A3P12111 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.23□□□□□ -2.37
COL6A3P12111 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
COL6A3P12111 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC0.23□□□□□ -2.37
COL6A3P12111 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.23□□□□□ -2.37
COL6A3P12111 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC0.23□□□□□ -2.37
COL6A3P12111 AC005668.1-201ENST00000571142 476 ntBASIC0.23□□□□□ -2.37
COL6A3P12111 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.23□□□□□ -2.37
COL6A3P12111 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.23□□□□□ -2.37
COL6A3P12111 AC092474.3-201ENST00000603022 568 ntBASIC0.23□□□□□ -2.37
COL6A3P12111 AL355877.2-201ENST00000603670 358 ntBASIC0.23□□□□□ -2.37
COL6A3P12111 MORN2-203ENST00000409131 544 ntTSL 5 BASIC0.23□□□□□ -2.37
COL6A3P12111 VPS26AP1-201ENST00000483197 979 ntBASIC0.23□□□□□ -2.37
COL6A3P12111 MTND2P26-201ENST00000528255 1029 ntBASIC0.23□□□□□ -2.37
COL6A3P12111 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.23□□□□□ -2.37
COL6A3P12111 OR1M4P-201ENST00000589199 287 ntBASIC0.23□□□□□ -2.37
COL6A3P12111 AC012507.3-201ENST00000603556 477 ntBASIC0.23□□□□□ -2.37
COL6A3P12111 AC055764.2-201ENST00000610089 670 ntBASIC0.23□□□□□ -2.37
COL6A3P12111 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
COL6A3P12111 RNU6-263P-201ENST00000363811 107 ntBASIC0.22□□□□□ -2.37
COL6A3P12111 Y_RNA.313-201ENST00000365095 103 ntBASIC0.22□□□□□ -2.37
COL6A3P12111 MIR618-201ENST00000385287 98 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms