Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.58□□□□□ -2.16
CD28P10747 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.58□□□□□ -2.16
CD28P10747 RPL7P54-201ENST00000438336 674 ntBASIC1.58□□□□□ -2.16
CD28P10747 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.58□□□□□ -2.16
CD28P10747 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.58□□□□□ -2.16
CD28P10747 AC004263.1-201ENST00000479327 332 ntBASIC1.58□□□□□ -2.16
CD28P10747 AC068781.1-201ENST00000488231 618 ntBASIC1.58□□□□□ -2.16
CD28P10747 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.58□□□□□ -2.16
CD28P10747 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.58□□□□□ -2.16
CD28P10747 RNU7-51P-201ENST00000516560 62 ntBASIC1.58□□□□□ -2.16
CD28P10747 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.58□□□□□ -2.16
CD28P10747 OR5B19P-201ENST00000531766 928 ntBASIC1.58□□□□□ -2.16
CD28P10747 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
CD28P10747 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
CD28P10747 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.58□□□□□ -2.16
CD28P10747 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.58□□□□□ -2.16
CD28P10747 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.58□□□□□ -2.16
CD28P10747 AC009094.1-201ENST00000564443 426 ntBASIC1.58□□□□□ -2.16
CD28P10747 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.58□□□□□ -2.16
CD28P10747 AC022022.2-201ENST00000602989 360 ntBASIC1.58□□□□□ -2.16
CD28P10747 AP001981.2-201ENST00000603241 418 ntBASIC1.58□□□□□ -2.16
CD28P10747 AC087045.1-201ENST00000605856 382 ntBASIC1.58□□□□□ -2.16
CD28P10747 RNU6-87P-201ENST00000607561 108 ntBASIC1.58□□□□□ -2.16
CD28P10747 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.58□□□□□ -2.16
CD28P10747 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.58□□□□□ -2.16
CD28P10747 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.58□□□□□ -2.16
CD28P10747 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.58□□□□□ -2.16
CD28P10747 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CD28P10747 AC099654.13-201ENST00000639774 207 ntBASIC1.58□□□□□ -2.16
CD28P10747 Z75746.1-201ENST00000440243 2080 ntBASIC1.58□□□□□ -2.16
CD28P10747 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CD28P10747 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.57□□□□□ -2.16
CD28P10747 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
CD28P10747 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
CD28P10747 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.57□□□□□ -2.16
CD28P10747 RNU4-52P-201ENST00000384209 138 ntBASIC1.57□□□□□ -2.16
CD28P10747 MIR583-201ENST00000384846 75 ntBASIC1.57□□□□□ -2.16
CD28P10747 SNORD23.1-201ENST00000408212 104 ntBASIC1.57□□□□□ -2.16
CD28P10747 U3.40-201ENST00000408706 208 ntBASIC1.57□□□□□ -2.16
CD28P10747 AC127391.1-201ENST00000411737 98 ntBASIC1.57□□□□□ -2.16
CD28P10747 AL031779.1-201ENST00000415663 330 ntBASIC1.57□□□□□ -2.16
CD28P10747 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.57□□□□□ -2.16
CD28P10747 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.57□□□□□ -2.16
CD28P10747 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.57□□□□□ -2.16
CD28P10747 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.57□□□□□ -2.16
CD28P10747 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.57□□□□□ -2.16
CD28P10747 MTND5P2-201ENST00000442927 1142 ntBASIC1.57□□□□□ -2.16
CD28P10747 NDUFB1P2-201ENST00000449477 176 ntBASIC1.57□□□□□ -2.16
CD28P10747 AL590365.1-201ENST00000450788 243 ntBASIC1.57□□□□□ -2.16
CD28P10747 BTF3P15-201ENST00000455606 336 ntBASIC1.57□□□□□ -2.16
CD28P10747 AL441985.1-201ENST00000457727 251 ntBASIC1.57□□□□□ -2.16
CD28P10747 AC093899.1-201ENST00000457984 376 ntBASIC1.57□□□□□ -2.16
CD28P10747 RNU6-717P-201ENST00000459076 104 ntBASIC1.57□□□□□ -2.16
CD28P10747 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.57□□□□□ -2.16
CD28P10747 AC005178.1-201ENST00000508392 440 ntBASIC1.57□□□□□ -2.16
CD28P10747 RNU1-40P-201ENST00000516816 164 ntBASIC1.57□□□□□ -2.16
CD28P10747 RNU1-97P-201ENST00000516872 164 ntBASIC1.57□□□□□ -2.16
CD28P10747 OR5AQ1P-201ENST00000527596 927 ntBASIC1.57□□□□□ -2.16
CD28P10747 AC012213.3-201ENST00000577199 777 ntBASIC1.57□□□□□ -2.16
CD28P10747 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.57□□□□□ -2.16
CD28P10747 AL670379.10-201ENST00000604330 253 ntBASIC1.57□□□□□ -2.16
CD28P10747 AL138963.2-201ENST00000605137 226 ntBASIC1.57□□□□□ -2.16
CD28P10747 AL670379.9-201ENST00000605428 253 ntBASIC1.57□□□□□ -2.16
CD28P10747 AC105129.3-201ENST00000605455 485 ntBASIC1.57□□□□□ -2.16
CD28P10747 AL355816.2-201ENST00000610049 647 ntBASIC1.57□□□□□ -2.16
CD28P10747 MIR6845-201ENST00000613182 61 ntBASIC1.57□□□□□ -2.16
CD28P10747 AC009878.1-201ENST00000621819 340 ntBASIC1.57□□□□□ -2.16
CD28P10747 AL031601.2-202ENST00000622650 282 ntBASIC1.57□□□□□ -2.16
CD28P10747 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.57□□□□□ -2.16
CD28P10747 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CD28P10747 ZNF72P-201ENST00000425869 1908 ntBASIC1.56□□□□□ -2.16
CD28P10747 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CD28P10747 AC073343.1-201ENST00000328239 651 ntBASIC1.56□□□□□ -2.16
CD28P10747 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CD28P10747 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CD28P10747 RNU6-1159P-201ENST00000362933 107 ntBASIC1.56□□□□□ -2.16
CD28P10747 SNORD56.2-201ENST00000363242 71 ntBASIC1.56□□□□□ -2.16
CD28P10747 RNU5A-2P-201ENST00000384337 116 ntBASIC1.56□□□□□ -2.16
CD28P10747 SNORA40.18-201ENST00000391200 128 ntBASIC1.56□□□□□ -2.16
CD28P10747 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CD28P10747 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CD28P10747 RNU6-1140P-201ENST00000410517 106 ntBASIC1.56□□□□□ -2.16
CD28P10747 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.56□□□□□ -2.16
CD28P10747 HIGD1AP15-201ENST00000416198 280 ntBASIC1.56□□□□□ -2.16
CD28P10747 RPS15AP12-201ENST00000419498 388 ntBASIC1.56□□□□□ -2.16
CD28P10747 Z99497.1-201ENST00000421282 135 ntBASIC1.56□□□□□ -2.16
CD28P10747 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.56□□□□□ -2.16
CD28P10747 AL445685.2-201ENST00000422551 342 ntBASIC1.56□□□□□ -2.16
CD28P10747 AC137499.1-201ENST00000427602 88 ntBASIC1.56□□□□□ -2.16
CD28P10747 RPL23AP30-201ENST00000432419 501 ntBASIC1.56□□□□□ -2.16
CD28P10747 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.56□□□□□ -2.16
CD28P10747 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.56□□□□□ -2.16
CD28P10747 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.56□□□□□ -2.16
CD28P10747 USP9YP15-201ENST00000442391 422 ntBASIC1.56□□□□□ -2.16
CD28P10747 AC124916.1-201ENST00000444020 547 ntBASIC1.56□□□□□ -2.16
CD28P10747 AL591719.1-201ENST00000444669 744 ntBASIC1.56□□□□□ -2.16
CD28P10747 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CD28P10747 FABP5P13-201ENST00000452144 328 ntBASIC1.56□□□□□ -2.16
CD28P10747 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.56□□□□□ -2.16
CD28P10747 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms