Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
CTSDP07339 AC005094.1-201ENST00000440420 368 ntBASIC1.03□□□□□ -2.24
CTSDP07339 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.03□□□□□ -2.24
CTSDP07339 PAXBP1P1-201ENST00000449315 447 ntBASIC1.03□□□□□ -2.24
CTSDP07339 BTF3P15-201ENST00000455606 336 ntBASIC1.03□□□□□ -2.24
CTSDP07339 MTCYBP43-201ENST00000513621 740 ntBASIC1.03□□□□□ -2.24
CTSDP07339 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.03□□□□□ -2.24
CTSDP07339 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.03□□□□□ -2.24
CTSDP07339 AP004247.1-201ENST00000531556 1289 ntBASIC1.03□□□□□ -2.24
CTSDP07339 AC087894.1-201ENST00000538359 518 ntBASIC1.03□□□□□ -2.24
CTSDP07339 IMMP1LP2-201ENST00000552954 492 ntBASIC1.03□□□□□ -2.24
CTSDP07339 AC023825.1-201ENST00000566704 1030 ntBASIC1.03□□□□□ -2.24
CTSDP07339 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.03□□□□□ -2.24
CTSDP07339 AC104985.3-201ENST00000623479 597 ntBASIC1.03□□□□□ -2.24
CTSDP07339 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CTSDP07339 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CTSDP07339 SNORD114-19-201ENST00000363072 75 ntBASIC1.02□□□□□ -2.25
CTSDP07339 MIR19A-201ENST00000384878 82 ntBASIC1.02□□□□□ -2.25
CTSDP07339 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.02□□□□□ -2.25
CTSDP07339 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CTSDP07339 MTND4P3-201ENST00000417829 541 ntBASIC1.02□□□□□ -2.25
CTSDP07339 USP9YP21-201ENST00000420603 432 ntBASIC1.02□□□□□ -2.25
CTSDP07339 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.02□□□□□ -2.25
CTSDP07339 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.02□□□□□ -2.25
CTSDP07339 MTND5P25-201ENST00000430499 799 ntBASIC1.02□□□□□ -2.25
CTSDP07339 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.02□□□□□ -2.25
CTSDP07339 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.02□□□□□ -2.25
CTSDP07339 MTCO2P25-201ENST00000447065 681 ntBASIC1.02□□□□□ -2.25
CTSDP07339 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.02□□□□□ -2.25
CTSDP07339 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.02□□□□□ -2.25
CTSDP07339 AC009474.2-201ENST00000451383 136 ntBASIC1.02□□□□□ -2.25
CTSDP07339 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.02□□□□□ -2.25
CTSDP07339 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.02□□□□□ -2.25
CTSDP07339 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.02□□□□□ -2.25
CTSDP07339 AC104629.1-201ENST00000494226 508 ntBASIC1.02□□□□□ -2.25
CTSDP07339 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.02□□□□□ -2.25
CTSDP07339 MTCO3P27-201ENST00000514397 196 ntBASIC1.02□□□□□ -2.25
CTSDP07339 AP003049.1-201ENST00000529418 457 ntBASIC1.02□□□□□ -2.25
CTSDP07339 AP000763.2-201ENST00000540641 163 ntBASIC1.02□□□□□ -2.25
CTSDP07339 RRN3P3-201ENST00000549207 578 ntBASIC1.02□□□□□ -2.25
CTSDP07339 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.02□□□□□ -2.25
CTSDP07339 AC136619.2-201ENST00000563361 631 ntBASIC1.02□□□□□ -2.25
CTSDP07339 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.02□□□□□ -2.25
CTSDP07339 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.02□□□□□ -2.25
CTSDP07339 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.02□□□□□ -2.25
CTSDP07339 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.02□□□□□ -2.25
CTSDP07339 AP000942.3-201ENST00000603702 160 ntBASIC1.02□□□□□ -2.25
CTSDP07339 RPL21P136-201ENST00000605378 396 ntBASIC1.02□□□□□ -2.25
CTSDP07339 AP002802.2-201ENST00000605877 235 ntBASIC1.02□□□□□ -2.25
CTSDP07339 AL050343.2-201ENST00000607338 280 ntBASIC1.02□□□□□ -2.25
CTSDP07339 AC090970.3-201ENST00000612566 866 ntBASIC1.02□□□□□ -2.25
CTSDP07339 AL512506.1-201ENST00000613918 449 ntBASIC1.02□□□□□ -2.25
CTSDP07339 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.02□□□□□ -2.25
CTSDP07339 AC112204.3-201ENST00000623822 332 ntBASIC1.02□□□□□ -2.25
CTSDP07339 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
CTSDP07339 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CTSDP07339 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CTSDP07339 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.01□□□□□ -2.25
CTSDP07339 MIR26B-201ENST00000362251 77 ntBASIC1.01□□□□□ -2.25
CTSDP07339 RNU6-288P-201ENST00000363690 104 ntBASIC1.01□□□□□ -2.25
CTSDP07339 MIR518D-201ENST00000385014 87 ntBASIC1.01□□□□□ -2.25
CTSDP07339 MIR30A-201ENST00000385092 71 ntBASIC1.01□□□□□ -2.25
CTSDP07339 RNU11-3P-201ENST00000391111 133 ntBASIC1.01□□□□□ -2.25
CTSDP07339 SNORA40.6-201ENST00000391153 128 ntBASIC1.01□□□□□ -2.25
CTSDP07339 MIR1285-1-201ENST00000408593 84 ntBASIC1.01□□□□□ -2.25
CTSDP07339 AC008267.5-201ENST00000424928 265 ntBASIC1.01□□□□□ -2.25
CTSDP07339 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.01□□□□□ -2.25
CTSDP07339 RNU7-95P-201ENST00000459222 64 ntBASIC1.01□□□□□ -2.25
CTSDP07339 AC004223.1-201ENST00000479840 271 ntBASIC1.01□□□□□ -2.25
CTSDP07339 AC109927.2-201ENST00000506416 303 ntBASIC1.01□□□□□ -2.25
CTSDP07339 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.01□□□□□ -2.25
CTSDP07339 RNU6-572P-201ENST00000516724 80 ntBASIC1.01□□□□□ -2.25
CTSDP07339 RNU6-143P-201ENST00000516942 93 ntBASIC1.01□□□□□ -2.25
CTSDP07339 AC009902.1-201ENST00000519351 183 ntBASIC1.01□□□□□ -2.25
CTSDP07339 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.01□□□□□ -2.25
CTSDP07339 AC087441.2-201ENST00000529141 262 ntBASIC1.01□□□□□ -2.25
CTSDP07339 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.01□□□□□ -2.25
CTSDP07339 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CTSDP07339 MIR4421-201ENST00000578133 69 ntBASIC1.01□□□□□ -2.25
CTSDP07339 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.01□□□□□ -2.25
CTSDP07339 VN1R80P-201ENST00000597126 338 ntBASIC1.01□□□□□ -2.25
CTSDP07339 AC073410.2-201ENST00000603240 332 ntBASIC1.01□□□□□ -2.25
CTSDP07339 AL133445.2-201ENST00000611191 527 ntBASIC1.01□□□□□ -2.25
CTSDP07339 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.01□□□□□ -2.25
CTSDP07339 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.01□□□□□ -2.25
CTSDP07339 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CTSDP07339 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CTSDP07339 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.01□□□□□ -2.25
CTSDP07339 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1□□□□□ -2.25
CTSDP07339 MIR378A-201ENST00000362177 66 ntBASIC1□□□□□ -2.25
CTSDP07339 RNU6-1284P-201ENST00000363701 100 ntBASIC1□□□□□ -2.25
CTSDP07339 RNU6-224P-201ENST00000384055 107 ntBASIC1□□□□□ -2.25
CTSDP07339 RNU6-611P-201ENST00000384276 104 ntBASIC1□□□□□ -2.25
CTSDP07339 SNORD14D-201ENST00000384390 87 ntBASIC1□□□□□ -2.25
CTSDP07339 SNORA40.2-201ENST00000390847 128 ntBASIC1□□□□□ -2.25
CTSDP07339 MIR1262-201ENST00000408276 93 ntBASIC1□□□□□ -2.25
CTSDP07339 RNU2-48P-201ENST00000410694 191 ntBASIC1□□□□□ -2.25
CTSDP07339 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1□□□□□ -2.25
CTSDP07339 BTF3P4-201ENST00000418852 495 ntBASIC1□□□□□ -2.25
CTSDP07339 AL022400.1-201ENST00000423946 935 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms