Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 COX6CP14-201ENST00000469580 174 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 RPL23AP65-201ENST00000475608 468 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 RN7SL817P-201ENST00000480777 288 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.38□□□□□ -1.71
PDGFAP04085 RNU5F-8P-201ENST00000515941 111 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 RNU6-581P-201ENST00000516214 105 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 RNU6-567P-201ENST00000516746 107 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 AC024405.2-202ENST00000532731 184 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 AP002392.1-201ENST00000537692 208 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.38□□□□□ -1.71
PDGFAP04085 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 AC105129.1-201ENST00000560250 297 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.38□□□□□ -1.71
PDGFAP04085 MIR3939-201ENST00000582614 106 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 Z83818.1-201ENST00000603584 150 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 AL359198.2-201ENST00000611836 194 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 MIR6716-201ENST00000613413 80 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 AC004825.2-201ENST00000616634 455 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 AC073308.1-201ENST00000623696 305 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 CUL1P1-201ENST00000509510 2425 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 AL445487.1-201ENST00000415694 1580 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDGFAP04085 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PDGFAP04085 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDGFAP04085 AC010733.2-201ENST00000589496 5702 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDGFAP04085 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.38□□□□□ -1.71
PDGFAP04085 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDGFAP04085 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PDGFAP04085 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.38□□□□□ -1.71
PDGFAP04085 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PDGFAP04085 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDGFAP04085 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.38□□□□□ -1.71
PDGFAP04085 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDGFAP04085 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PDGFAP04085 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
PDGFAP04085 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDGFAP04085 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PDGFAP04085 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDGFAP04085 MAPK10-303ENST00000641324 3959 ntBASIC4.37□□□□□ -1.71
PDGFAP04085 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.37□□□□□ -1.71
PDGFAP04085 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDGFAP04085 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDGFAP04085 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDGFAP04085 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDGFAP04085 MIR448-201ENST00000362131 111 ntBASIC4.37□□□□□ -1.71
PDGFAP04085 RNU6-545P-201ENST00000362681 104 ntBASIC4.37□□□□□ -1.71
PDGFAP04085 Y_RNA.76-201ENST00000362931 109 ntBASIC4.37□□□□□ -1.71
PDGFAP04085 RNU6-626P-201ENST00000363354 107 ntBASIC4.37□□□□□ -1.71
PDGFAP04085 RNA5SP509-201ENST00000364577 119 ntBASIC4.37□□□□□ -1.71
PDGFAP04085 RNU6-1145P-201ENST00000384246 107 ntBASIC4.37□□□□□ -1.71
PDGFAP04085 RNA5SP372-201ENST00000390836 115 ntBASIC4.37□□□□□ -1.71
PDGFAP04085 RNU1-82P-201ENST00000390851 165 ntBASIC4.37□□□□□ -1.71
PDGFAP04085 HDGFP1-201ENST00000405943 252 ntBASIC4.37□□□□□ -1.71
PDGFAP04085 AC099548.1-201ENST00000421443 426 ntBASIC4.37□□□□□ -1.71
PDGFAP04085 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.37□□□□□ -1.71
PDGFAP04085 AC244670.1-201ENST00000436879 112 ntBASIC4.37□□□□□ -1.71
PDGFAP04085 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.37□□□□□ -1.71
PDGFAP04085 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.37□□□□□ -1.71
PDGFAP04085 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.37□□□□□ -1.71
PDGFAP04085 RPS29P20-201ENST00000489592 171 ntBASIC4.37□□□□□ -1.71
PDGFAP04085 RNA5SP54-201ENST00000516951 92 ntBASIC4.37□□□□□ -1.71
PDGFAP04085 RPL21P7-201ENST00000557463 483 ntBASIC4.37□□□□□ -1.71
PDGFAP04085 AC021739.1-201ENST00000559631 174 ntBASIC4.37□□□□□ -1.71
PDGFAP04085 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.37□□□□□ -1.71
PDGFAP04085 AL121932.1-201ENST00000605542 214 ntBASIC4.37□□□□□ -1.71
PDGFAP04085 AC091979.2-201ENST00000607514 214 ntBASIC4.37□□□□□ -1.71
PDGFAP04085 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.37□□□□□ -1.71
PDGFAP04085 AC110491.1-201ENST00000562191 2010 ntBASIC4.37□□□□□ -1.71
PDGFAP04085 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.37□□□□□ -1.71
PDGFAP04085 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PDGFAP04085 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDGFAP04085 RAD17P1-201ENST00000418130 2042 ntBASIC4.36□□□□□ -1.71
PDGFAP04085 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.36□□□□□ -1.71
PDGFAP04085 RNU6-20P-201ENST00000384106 107 ntBASIC4.36□□□□□ -1.71
PDGFAP04085 RNU6-746P-201ENST00000384112 109 ntBASIC4.36□□□□□ -1.71
PDGFAP04085 Y_RNA.570-201ENST00000384750 101 ntBASIC4.36□□□□□ -1.71
PDGFAP04085 MIR195-201ENST00000385194 87 ntBASIC4.36□□□□□ -1.71
PDGFAP04085 PCNPP3-201ENST00000393579 471 ntBASIC4.36□□□□□ -1.71
PDGFAP04085 RNA5SP390-201ENST00000410191 113 ntBASIC4.36□□□□□ -1.71
PDGFAP04085 BPY2DP-201ENST00000422208 265 ntBASIC4.36□□□□□ -1.71
PDGFAP04085 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.36□□□□□ -1.71
PDGFAP04085 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.36□□□□□ -1.71
PDGFAP04085 RPL7P49-201ENST00000471402 708 ntBASIC4.36□□□□□ -1.71
PDGFAP04085 VWA8P1-201ENST00000510889 176 ntBASIC4.36□□□□□ -1.71
PDGFAP04085 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.36□□□□□ -1.71
PDGFAP04085 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.36□□□□□ -1.71
PDGFAP04085 AC012603.1-201ENST00000606424 528 ntBASIC4.36□□□□□ -1.71
PDGFAP04085 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.36□□□□□ -1.71
PDGFAP04085 U2.22-201ENST00000636441 106 ntBASIC4.36□□□□□ -1.71
PDGFAP04085 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.36□□□□□ -1.71
PDGFAP04085 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PDGFAP04085 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.36□□□□□ -1.71
PDGFAP04085 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.36□□□□□ -1.71
PDGFAP04085 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.36□□□□□ -1.71
PDGFAP04085 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.36□□□□□ -1.71
PDGFAP04085 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.36□□□□□ -1.71
PDGFAP04085 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.36□□□□□ -1.71
PDGFAP04085 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms