Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AL160394.1-201ENST00000624765 724 ntBASIC2.68□□□□□ -1.98
VTNP04004 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.68□□□□□ -1.98
VTNP04004 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VTNP04004 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.68□□□□□ -1.98
VTNP04004 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.68□□□□□ -1.98
VTNP04004 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.68□□□□□ -1.98
VTNP04004 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.68□□□□□ -1.98
VTNP04004 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VTNP04004 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VTNP04004 AC008669.1-201ENST00000565823 2178 ntBASIC2.67□□□□□ -1.98
VTNP04004 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.67□□□□□ -1.98
VTNP04004 SNORA69-201ENST00000383895 132 ntBASIC2.67□□□□□ -1.98
VTNP04004 SNORA70B-201ENST00000384210 135 ntBASIC2.67□□□□□ -1.98
VTNP04004 Y_RNA.453-201ENST00000384223 109 ntBASIC2.67□□□□□ -1.98
VTNP04004 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
VTNP04004 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.67□□□□□ -1.98
VTNP04004 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.67□□□□□ -1.98
VTNP04004 MIR1261-201ENST00000408659 82 ntBASIC2.67□□□□□ -1.98
VTNP04004 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.67□□□□□ -1.98
VTNP04004 Z98742.3-201ENST00000418637 326 ntBASIC2.67□□□□□ -1.98
VTNP04004 MTCO1P20-201ENST00000425366 358 ntBASIC2.67□□□□□ -1.98
VTNP04004 UBE2V1P8-201ENST00000437166 265 ntBASIC2.67□□□□□ -1.98
VTNP04004 MTATP6P13-201ENST00000438531 667 ntBASIC2.67□□□□□ -1.98
VTNP04004 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.67□□□□□ -1.98
VTNP04004 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.67□□□□□ -1.98
VTNP04004 DPPA3P1-201ENST00000448050 469 ntBASIC2.67□□□□□ -1.98
VTNP04004 AL118520.1-201ENST00000450770 291 ntBASIC2.67□□□□□ -1.98
VTNP04004 AL356010.1-201ENST00000456364 102 ntBASIC2.67□□□□□ -1.98
VTNP04004 RNU7-23P-201ENST00000459465 62 ntBASIC2.67□□□□□ -1.98
VTNP04004 AC126182.1-201ENST00000478134 357 ntBASIC2.67□□□□□ -1.98
VTNP04004 AC139453.3-201ENST00000493276 369 ntBASIC2.67□□□□□ -1.98
VTNP04004 AC011352.1-201ENST00000512300 793 ntBASIC2.67□□□□□ -1.98
VTNP04004 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.67□□□□□ -1.98
VTNP04004 AC105417.1-201ENST00000514691 285 ntBASIC2.67□□□□□ -1.98
VTNP04004 MTND1P5-201ENST00000517906 940 ntBASIC2.67□□□□□ -1.98
VTNP04004 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.67□□□□□ -1.98
VTNP04004 MTND1P35-201ENST00000526739 508 ntBASIC2.67□□□□□ -1.98
VTNP04004 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.67□□□□□ -1.98
VTNP04004 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.67□□□□□ -1.98
VTNP04004 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.67□□□□□ -1.98
VTNP04004 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VTNP04004 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.67□□□□□ -1.98
VTNP04004 AC024940.5-201ENST00000622889 474 ntBASIC2.67□□□□□ -1.98
VTNP04004 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VTNP04004 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
VTNP04004 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VTNP04004 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.67□□□□□ -1.98
VTNP04004 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VTNP04004 AC103710.2-202ENST00000641454 2853 ntBASIC2.67□□□□□ -1.98
VTNP04004 AC099654.7-201ENST00000635788 2127 ntBASIC2.66□□□□□ -1.98
VTNP04004 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
VTNP04004 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VTNP04004 ZNF658B-202ENST00000615961 3375 ntBASIC2.66□□□□□ -1.98
VTNP04004 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
VTNP04004 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
VTNP04004 MTND4P14-201ENST00000435799 1354 ntBASIC2.66□□□□□ -1.98
VTNP04004 NACAP2-201ENST00000318548 624 ntBASIC2.66□□□□□ -1.98
VTNP04004 SNORD21-201ENST00000383953 95 ntBASIC2.66□□□□□ -1.98
VTNP04004 Y_RNA.402-201ENST00000383972 102 ntBASIC2.66□□□□□ -1.98
VTNP04004 RNU6-550P-201ENST00000391057 101 ntBASIC2.66□□□□□ -1.98
VTNP04004 RNU2-68P-201ENST00000410878 191 ntBASIC2.66□□□□□ -1.98
VTNP04004 RNU6-387P-201ENST00000411331 105 ntBASIC2.66□□□□□ -1.98
VTNP04004 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.66□□□□□ -1.98
VTNP04004 OR6C66P-201ENST00000414917 930 ntBASIC2.66□□□□□ -1.98
VTNP04004 AL160275.3-201ENST00000423876 471 ntBASIC2.66□□□□□ -1.98
VTNP04004 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.66□□□□□ -1.98
VTNP04004 CALM2P2-201ENST00000428512 440 ntBASIC2.66□□□□□ -1.98
VTNP04004 AL596276.1-201ENST00000434465 418 ntBASIC2.66□□□□□ -1.98
VTNP04004 SNRPEP9-201ENST00000436794 238 ntBASIC2.66□□□□□ -1.98
VTNP04004 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.66□□□□□ -1.98
VTNP04004 AC016691.1-201ENST00000441321 413 ntBASIC2.66□□□□□ -1.98
VTNP04004 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.66□□□□□ -1.98
VTNP04004 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.66□□□□□ -1.98
VTNP04004 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.66□□□□□ -1.98
VTNP04004 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.66□□□□□ -1.98
VTNP04004 AL163973.1-201ENST00000484753 577 ntBASIC2.66□□□□□ -1.98
VTNP04004 RPL36AP51-201ENST00000487216 318 ntBASIC2.66□□□□□ -1.98
VTNP04004 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.66□□□□□ -1.98
VTNP04004 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.66□□□□□ -1.98
VTNP04004 SUMO2P6-201ENST00000505273 288 ntBASIC2.66□□□□□ -1.98
VTNP04004 AC026436.1-201ENST00000510537 270 ntBASIC2.66□□□□□ -1.98
VTNP04004 RAC1P5-201ENST00000512182 576 ntBASIC2.66□□□□□ -1.98
VTNP04004 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.66□□□□□ -1.98
VTNP04004 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.66□□□□□ -1.98
VTNP04004 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.66□□□□□ -1.98
VTNP04004 AL391261.3-201ENST00000557194 520 ntBASIC2.66□□□□□ -1.98
VTNP04004 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.66□□□□□ -1.98
VTNP04004 MIR4703-201ENST00000577728 79 ntBASIC2.66□□□□□ -1.98
VTNP04004 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.66□□□□□ -1.98
VTNP04004 AC078899.3-201ENST00000599065 212 ntBASIC2.66□□□□□ -1.98
VTNP04004 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.66□□□□□ -1.98
VTNP04004 AL138889.2-201ENST00000603883 242 ntBASIC2.66□□□□□ -1.98
VTNP04004 AC103810.6-201ENST00000606708 136 ntBASIC2.66□□□□□ -1.98
VTNP04004 FTX_3.1-201ENST00000610451 147 ntBASIC2.66□□□□□ -1.98
VTNP04004 AC002064.3-201ENST00000623448 346 ntBASIC2.66□□□□□ -1.98
VTNP04004 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
VTNP04004 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.66□□□□□ -1.98
VTNP04004 AC110079.1-202ENST00000635213 138 ntBASIC2.66□□□□□ -1.98
VTNP04004 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.66□□□□□ -1.98
VTNP04004 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms