Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NKX2-2O95096 SNORA38.1-201ENST00000364172 131 ntBASIC2.82□□□□□ -1.96
NKX2-2O95096 AL512633.1-201ENST00000399931 655 ntBASIC2.82□□□□□ -1.96
NKX2-2O95096 RNU4-26P-201ENST00000410270 107 ntBASIC2.82□□□□□ -1.96
NKX2-2O95096 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.82□□□□□ -1.96
NKX2-2O95096 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.82□□□□□ -1.96
NKX2-2O95096 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.82□□□□□ -1.96
NKX2-2O95096 PTGES3P4-201ENST00000426243 356 ntBASIC2.82□□□□□ -1.96
NKX2-2O95096 RPL23AP58-201ENST00000440453 469 ntBASIC2.82□□□□□ -1.96
NKX2-2O95096 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.82□□□□□ -1.96
NKX2-2O95096 OSTCP8-201ENST00000445117 448 ntBASIC2.82□□□□□ -1.96
NKX2-2O95096 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.82□□□□□ -1.96
NKX2-2O95096 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.82□□□□□ -1.96
NKX2-2O95096 snoU109.2-201ENST00000459316 135 ntBASIC2.82□□□□□ -1.96
NKX2-2O95096 RPL31P41-201ENST00000477967 372 ntBASIC2.82□□□□□ -1.96
NKX2-2O95096 Y_RNA.665-201ENST00000516177 98 ntBASIC2.82□□□□□ -1.96
NKX2-2O95096 ACA59.2-201ENST00000517061 156 ntBASIC2.82□□□□□ -1.96
NKX2-2O95096 AC069113.1-201ENST00000517763 267 ntBASIC2.82□□□□□ -1.96
NKX2-2O95096 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.82□□□□□ -1.96
NKX2-2O95096 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.82□□□□□ -1.96
NKX2-2O95096 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.82□□□□□ -1.96
NKX2-2O95096 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.82□□□□□ -1.96
NKX2-2O95096 MIR3944-201ENST00000581277 108 ntBASIC2.82□□□□□ -1.96
NKX2-2O95096 BNIP3P25-201ENST00000596023 559 ntBASIC2.82□□□□□ -1.96
NKX2-2O95096 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.82□□□□□ -1.96
NKX2-2O95096 AL020991.1-201ENST00000612314 373 ntBASIC2.82□□□□□ -1.96
NKX2-2O95096 RMST_7.1-201ENST00000621935 268 ntBASIC2.82□□□□□ -1.96
NKX2-2O95096 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.82□□□□□ -1.96
NKX2-2O95096 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.82□□□□□ -1.96
NKX2-2O95096 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.82□□□□□ -1.96
NKX2-2O95096 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
NKX2-2O95096 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
NKX2-2O95096 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.81□□□□□ -1.96
NKX2-2O95096 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
NKX2-2O95096 MIR22-201ENST00000362190 85 ntBASIC2.81□□□□□ -1.96
NKX2-2O95096 Y_RNA.157-201ENST00000363638 102 ntBASIC2.81□□□□□ -1.96
NKX2-2O95096 RNU6-748P-201ENST00000384648 107 ntBASIC2.81□□□□□ -1.96
NKX2-2O95096 RNU6-19P-201ENST00000384718 107 ntBASIC2.81□□□□□ -1.96
NKX2-2O95096 RN7SKP220-201ENST00000410611 288 ntBASIC2.81□□□□□ -1.96
NKX2-2O95096 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.81□□□□□ -1.96
NKX2-2O95096 AL671855.1-201ENST00000446875 1203 ntBASIC2.81□□□□□ -1.96
NKX2-2O95096 NFU1P2-201ENST00000448700 469 ntBASIC2.81□□□□□ -1.96
NKX2-2O95096 AC087884.1-201ENST00000469738 328 ntBASIC2.81□□□□□ -1.96
NKX2-2O95096 AC107626.1-201ENST00000471084 183 ntBASIC2.81□□□□□ -1.96
NKX2-2O95096 AC006445.1-201ENST00000491925 405 ntBASIC2.81□□□□□ -1.96
NKX2-2O95096 MTCYBP18-201ENST00000501056 747 ntBASIC2.81□□□□□ -1.96
NKX2-2O95096 MRPS36P2-201ENST00000512569 299 ntBASIC2.81□□□□□ -1.96
NKX2-2O95096 RN7SKP43-201ENST00000516173 320 ntBASIC2.81□□□□□ -1.96
NKX2-2O95096 AC023050.3-201ENST00000541142 333 ntBASIC2.81□□□□□ -1.96
NKX2-2O95096 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.81□□□□□ -1.96
NKX2-2O95096 AC020895.1-201ENST00000595362 272 ntBASIC2.81□□□□□ -1.96
NKX2-2O95096 RPL23AP78-201ENST00000599928 470 ntBASIC2.81□□□□□ -1.96
NKX2-2O95096 ATP1B3P1-201ENST00000605365 821 ntBASIC2.81□□□□□ -1.96
NKX2-2O95096 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
NKX2-2O95096 ZNF826P-207ENST00000622273 1910 ntBASIC2.81□□□□□ -1.96
NKX2-2O95096 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NKX2-2O95096 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.81□□□□□ -1.96
NKX2-2O95096 AC093908.1-201ENST00000623125 8092 ntBASIC2.81□□□□□ -1.96
NKX2-2O95096 AL355596.1-201ENST00000565399 3996 ntBASIC2.81□□□□□ -1.96
NKX2-2O95096 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.81□□□□□ -1.96
NKX2-2O95096 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.8□□□□□ -1.96
NKX2-2O95096 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.8□□□□□ -1.96
NKX2-2O95096 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.8□□□□□ -1.96
NKX2-2O95096 SNORA54-201ENST00000384281 123 ntBASIC2.8□□□□□ -1.96
NKX2-2O95096 RNU6-332P-201ENST00000391193 108 ntBASIC2.8□□□□□ -1.96
NKX2-2O95096 EIF4E2P1-201ENST00000393781 255 ntBASIC2.8□□□□□ -1.96
NKX2-2O95096 FTH1P15-201ENST00000406984 280 ntBASIC2.8□□□□□ -1.96
NKX2-2O95096 AL096701.2-201ENST00000416920 238 ntBASIC2.8□□□□□ -1.96
NKX2-2O95096 RPL7P37-201ENST00000425095 738 ntBASIC2.8□□□□□ -1.96
NKX2-2O95096 MTND1P2-201ENST00000430604 821 ntBASIC2.8□□□□□ -1.96
NKX2-2O95096 AL139415.2-201ENST00000431968 163 ntBASIC2.8□□□□□ -1.96
NKX2-2O95096 USP9YP28-201ENST00000435142 589 ntBASIC2.8□□□□□ -1.96
NKX2-2O95096 BX510359.1-201ENST00000456973 237 ntBASIC2.8□□□□□ -1.96
NKX2-2O95096 AC006026.2-201ENST00000457376 180 ntBASIC2.8□□□□□ -1.96
NKX2-2O95096 RN7SL75P-201ENST00000461926 281 ntBASIC2.8□□□□□ -1.96
NKX2-2O95096 AC117503.1-201ENST00000472241 394 ntBASIC2.8□□□□□ -1.96
NKX2-2O95096 MRPL42P6-201ENST00000486397 371 ntBASIC2.8□□□□□ -1.96
NKX2-2O95096 RN7SL633P-201ENST00000488974 297 ntBASIC2.8□□□□□ -1.96
NKX2-2O95096 AC069439.1-201ENST00000494739 167 ntBASIC2.8□□□□□ -1.96
NKX2-2O95096 SEM1P1-201ENST00000506694 209 ntBASIC2.8□□□□□ -1.96
NKX2-2O95096 AC008885.1-201ENST00000514930 301 ntBASIC2.8□□□□□ -1.96
NKX2-2O95096 RNU6-1069P-201ENST00000516612 133 ntBASIC2.8□□□□□ -1.96
NKX2-2O95096 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NKX2-2O95096 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.8□□□□□ -1.96
NKX2-2O95096 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.8□□□□□ -1.96
NKX2-2O95096 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.8□□□□□ -1.96
NKX2-2O95096 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.8□□□□□ -1.96
NKX2-2O95096 AC024153.1-201ENST00000603103 365 ntBASIC2.8□□□□□ -1.96
NKX2-2O95096 APOOP1-201ENST00000604695 592 ntBASIC2.8□□□□□ -1.96
NKX2-2O95096 AC011890.2-201ENST00000613393 294 ntBASIC2.8□□□□□ -1.96
NKX2-2O95096 AC093831.2-201ENST00000624393 3427 ntBASIC2.8□□□□□ -1.96
NKX2-2O95096 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
NKX2-2O95096 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NKX2-2O95096 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NKX2-2O95096 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
NKX2-2O95096 Y_RNA.615-201ENST00000410769 117 ntBASIC2.79□□□□□ -1.96
NKX2-2O95096 ATG3P1-201ENST00000419507 911 ntBASIC2.79□□□□□ -1.96
NKX2-2O95096 MRPS10P2-201ENST00000431226 381 ntBASIC2.79□□□□□ -1.96
NKX2-2O95096 AL590639.1-201ENST00000456484 337 ntBASIC2.79□□□□□ -1.96
NKX2-2O95096 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms